BGIOSGA020719

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Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020719| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020719, complete gene.| tag = P0637D0...")
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Gene Name

BGIOSGA020719

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020719, complete gene.

LocusTag

P0637D03.25

Ensembl Transcript ID

BGIOSGA020719-TA

Ensembl Protein ID

BGIOSGA020719-PA

Length

3715

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29317146..29320860

Sequence Coding Region

29320765..29320860,29320381..29320442,29320093..29320151,29319968..29320006,29319656..29319756
,29319055..29319167,29318782..29318881,29318538..29318684,29318313..29318373
,29318102..29318199,29317880..29318022,29317545..29317628,29317379..29317468
,29317146..29317200

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29317146..29320860 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29317146..29320860 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCGCCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTGTCGTGCGTTAGGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTTGCTAGCAGCGTTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCAATCTTCTAGCACGGAGAAGACAAAGGTTGGCATCAATGGATTTGGACGGATTGGGAGGTTGGTTCTACGAATTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTAAGTACATGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAAAGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAAGAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTGGTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGGTGGTGCAAGGAAAGTAGTGATATCTGCTCCATCCGCAGATGCTCCTATGTTTGTAGTCGGAGTAAATGAGAAGAATTACAACCCCAGCATGAATGTTGTCTCTAATGCAAGTTGTACTACCAACTGTCTTGCGCCCCTTGCCAAGATTGTCCACGAGGAATTTGGCATAGCTGAGGGCCTCATGACAACTGTCCATGCTACAACAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGACGGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGCTGTTGGAAAGGTCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACGTCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAGCAGCTATCAAGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGGACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTCTAGCATATTTGATGCCAAGGCTGGAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCTACAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MASLAVPLRASATPAIAGTGSGGGSRAADPVKVSCVRSKVTCGFPSVGASSSLASSVEPVRATATQAPLATHQSSSTEKTKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVVDESTLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDTRSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIGHMALVNAKP</aaseq>

Gene Sequence

<dnaseqindica>1..96#419..480#710..768#855..893#1105..1205#1694..1806#1980..2079#2177..2323#2488..2548#2662..2759#2839..2981#3233..3316#3393..3482#3661..3715#ATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCGCCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTCCCCATTCGCCATCCCGATCTCTCTCCCTCTCTGATTTTTTTTGGTCTCTTCGGTGAGAACCTGTTCCTGTTTCGTGTGACTGACAGCTGCCAACTCATGCGCATGAAACTGTTGTTCGTATGGCGATGTTTTTGTTTCTATGTGTAGGAGTAATGGAGTATTGTAGTGAACACTCAGCTGTTTCCCACTTTAATTGCTTGTATTTCGCTTGATTTTCCGAGTTCAGTTGAGATTCGTTCGCGTTTGTTTAGCCATGATTTCGCAGATTGAAACTTGCTAAATTTCCACCAAATTGATCGATGTTGCTGCTGTGTTGCAGGTGTCGTGCGTTAGGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTGTGAGTGCCTCCATCATCCAGATTATTCGAATTCCTTGAATAACAAAATTTGACAACCGAGAGCACAGCTGTTGGTTAGAGCGGAAAATTTCTGAGAGCAAAACGGACTTGACCCCTCGTTTTCTCAACTTGTGTTTTTGTGGTTTTTGCTCTGTGCATATCATGGATACGGTTGATCAGTATTAGCTGTAGCACATTGCATTTTCAATAAACTGCTTTTCTACTGCAGTGCTAGCAGCGTTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCGTAAGTTGCTCCATCCATCAAACACTAAAAGGGGTTTATGAGGACTGCAGTGGTGTTATGATTATTTTTTTTTCTTCTTTATGTAGAATCTTCTAGCACGGAGAAGACAAAGGTTGGCATCAATGGTGAGTTCCTCCTGTAGATTGGAAAAATAATGACATTATCAAGTTGTTGTAATGTATGATTACTATTTGGAAGTTGCGCTATGCTAACTCAACTTGGAACGTTGAAGTGAACCCTTGTTCAACTTCATTGCTTCTGTAGGTGACCTTAAATTACTTTTGATCTTTATTTAGTCTTTGGTTGTAAAGGAACTCTTTATTCTTGTTATTGCAGGATTTGGACGGATTGGGAGGTTGGTTCTACGAATTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTAAGTACATGGTAAGTTCTGTTGATAGATTTTGGAAAAGCACAGTATGTATTACGTCCTGTTGCAGTGGAACCGATGATGTTCAATGTATCTTTATATTATTTCTACAAATAACAGTGTAAACATGTTGAGTAGAAATGCTTGTTACTCTAATATGATAATATGCCTAAGTACTCTTTAGCTCTTCTTAACTTAGTAAACATGCTTTGTTTATCATTATCTGACATAAGATCTTAAAGAGAAAAGGCATTCCTATATAAGGTCCTTTACATGCTGGAGGTGTGTCTTGCATGAGAACACGAACCCAACCCATGCTATTCACTTTTTTTTTTTTACTATTTTGTTAGTTTCAGATAACCATAATTATTCTTAATGAGAAAATTGACAGGTTCACCTTTACTAAACTGTTTTTGAACATAACTGTATTGAGTGCTACAACTTCATATGTTTCATTTAGACTATTTCAAGTTCTTTGATCGTGATATTCTTCTTGTTCTAGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAAAGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAAGGTAAGAACATGAATTCTTCAGGTCTGGTTGAATCCACGGTTTTGTTTAAAAATTGTACTTTTGACATACTTGACTCCTTATATTCTTGTTATATAGTTTTGGGTTGTAATAATTCTCCCACGTGCTTTAGTTTTGCTAAAATTATTTGTTGGTGCTTCTCCTTTCCATTTCAGAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTGGTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGTTTGCCTCTGCATTTACACAACCCCTCTGGCCAATCAGAAAATAAACTAAGCCATTCACATGCAAAAAATGCTGAGATTCCATCTGGCTTATATAGGGTGGTGCAAGGAAAGTAGTGATATCTGCTCCATCCGCAGATGCTCCTATGTTTGTAGTCGGAGTAAATGAGAAGAATTACAACCCCAGCATGAATGTTGTCTCTAATGCAAGTTGTACTACCAACTGTCTTGCGCCCCTTGCCAAGGTATTTTTCTGTTCTGTTGTATCCTTTCTTTGTTAAGGATACACATGGAGTATGTTGTGTCTACTTTGATCGGTTCTTGACTTCAGATGATAAGTACATTTCGCTGTTACAAAATGTAGCACCATGCCACCATACTGGTTTGTATCATGGTTTGTACTTTTCAGATTGTCCACGAGGAATTTGGCATAGCTGAGGGCCTCATGACAACTGTCCATGCTACAACAGGTTTTCTCCTCTTTTATACTTTTCGATTTGCACACACAGGATTTACTGCTCTTCTCATCTAAAAGCTTATAAAAGTAGCATTGTTATTGAATCAAATGATTTTATTTGTTCAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGACGGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGTTATTTCTTCTCGCGGTGAGTGGGAGAGTTCCTCTTTTTTCAAGTTTCTCATGTTCAAACCTTTTGCTTTGATATTAGGCTGTTGGAAAGGTCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACGTCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAGCAGCTATCAAGTATGCCTTCAATCTTCTTGTCATGTCCTAGCACATTTAGTTGCTGCTTCATTGCTTAATGCACTCATTTTTTCGTTGGTGTTTATATTCTGTTCAGTTTCTCGCTCTATGCTTTCTAATCATTTCTGGCTTAACTTCTCAATTTTTTGTTAGTATTTGGGTCATCATTTGTCTGCAATTGTTCGAATGATTGGACTGGAGAGTTGTTAATCCAACATAGTACTTAACCATGTCCTGGTCCTTGTTCCCAGGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGGACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTAAGTATTTTCGTCTTCGCAATGTTTTTCTTGAACATAGGAGCAAAAATTGCTAAAGCCTATCTATATTTTCCAGGTCTAGCATATTTGATGCCAAGGCTGGAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCTACAGGTGAGCATCCACTTAATGGCATAACGCCTTAGCCAGCCCTTTTCAGAACCTATTCGTTTTCCTGATTACTGCAGAAACTGAATGTTTCATACGCAACTCGTGTGTTCCAAATGGTGCCTTGCATGTATTTTTTCCATCTATCTTTATCTGACCTGAAGATTTTGTTTCTTTGCTCCAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020719

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020719&oldid=43244"