Os11g0550900

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0550900| Description = Conserved hypothetical protein| Version = NM_001074609.1 GI:115485866 GeneID:4350707| Length = 5368 bp| Definition ...")
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Gene Name

Os11g0550900

Description

Conserved hypothetical protein

Version

NM_001074609.1 GI:115485866 GeneID:4350707

Length

5368 bp

Definition

Oryza sativa Japonica Group Os11g0550900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22325222..22330589

Sequence Coding Region

22325618..22325727,22326430..22326610,22326683..22326741,22326897..22327017,22327576..22327631
,22327743..22327851,22329861..22329975,22330205..22330581

Expression

GEO Profiles:Os11g0550900

Genome Context

<gbrowseImage1> name=NC_008404:22325222..22330589 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22325222..22330589 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcctgcagcaaaagcctgcgagggcccgtcgaccgccgccgccattccacgctcgccgccggcggctggggctccgccctagcgagcgtggcatcggcaacgcaactccccctcgagccgccccgccgccatcgccggctggctctgccgggtgcgcgcgcttccggtccacgcgccggttggggattgccccgtcgtgctctagcttaaccgcgatcctggcgcagggaagggttgtggggctaggaggttgcaaggtcgtcttcttccccctcttggcggcggcggccggtgattcgaggggaaggcagaatgctggggttctccaccggccagttggtggtcatcctcggggcttgctccctcatgatgacgacatgatcaagatcgcaagggtggcggggaggatgaccgggagggcggtcgggcgcctcatgttgttccgcaggcagatggatgagatcctggagcagactgcagcaaagcaggttaacaaggagcttaaagatgctatgacacagctagattcaattcgttatgaagtccagaacttatctaggtttactcctggacagttcatgaggcagcataaccctgtaggcgtggatcatgaagcagaaaaaaatgatgccgttgatggctctgcgcttaatctagaagaacttcgtcatcaaatccgcagtatggttcatgatgaaattgaaagcttttataaaacaaatccagataagttttccgggaggttggataatgctgacaccgttaatagatctggcccagttgaaggtaaagaagctgatgtagctgttatccccacaatgttggcatcaaaggacatgaaattggcaaacacaggctctacagatctacacagcaaagcaacaatgtattcaagattaactgaatccccagaaatgagtggcagttctggacatcaattcaaagagagtgatgggttattaaatatactaccaatatcagctgaaagtgctggattacttccaagccgctcagataaaccacaaggctcagacctattactggaggcaacacttgaagcagaggtcgcagagcacgcaaaatccttcgcgcagcagcatcatgatgaactgcacaaggagtga</cdnaseq>

Protein Sequence

<aaseq>MILQQKPARARRPPPPFHARRRRLGLRPSERGIGNATPPRAAPP PSPAGSAGCARFRSTRRLGIAPSCSSLTAILAQGRVVGLGGCKVVFFPLLAAAAGDSR GRQNAGVLHRPVGGHPRGLLPHDDDMIKIARVAGRMTGRAVGRLMLFRRQMDEILEQT AAKQVNKELKDAMTQLDSIRYEVQNLSRFTPGQFMRQHNPVGVDHEAEKNDAVDGSAL NLEELRHQIRSMVHDEIESFYKTNPDKFSGRLDNADTVNRSGPVEGKEADVAVIPTML ASKDMKLANTGSTDLHSKATMYSRLTESPEMSGSSGHQFKESDGLLNILPISAESAGL LPSRSDKPQGSDLLLEATLEAEVAEHAKSFAQQHHDELHKE</aaseq>

Gene Sequence

<dnaseqindica>4863..4972#3980..4160#3849..3907#3573..3693#2959..3014#2739..2847#615..729#9..385#agggctgaatgatcctgcagcaaaagcctgcgagggcccgtcgaccgccgccgccattccacgctcgccgccggcggctggggctccgccctagcgagcgtggcatcggcaacgcaactccccctcgagccgccccgccgccatcgccggctggctctgccgggtgcgcgcgcttccggtccacgcgccggttggggattgccccgtcgtgctctagcttaaccgcgatcctggcgcagggaagggttgtggggctaggaggttgcaaggtcgtcttcttccccctcttggcggcggcggccggtgattcgaggggaaggcagaatgctggggttctccaccggccagttggtggtcatcctcggggcttgctccctcatgatgagtaaggctgcatcttcttgcctctctcgtttactcttgcaatgttagaatttgggttcgattttacctgattactgaggaaagaagaagggattgattgtttggagagagagagagagagcactggagtttggtgttgtgatggaaatgcacatgctagatgctaggaggtttatttctcttttttgtgctcaaatgctatctgtttgtttgctgttgttagagcgcagcgacatgatcaagatcgcaagggtggcggggaggatgaccgggagggcggtcgggcgcctcatgttgttccgcaggcagatggatgagatcctggagcagactgcagcaaagcaggtaatgtgcagcactcccaagcttagaatcacctcttatgagttgcgagataactgcaggacctgaatctacgcacattttctttttcctaattgttgcaatgtgtagttgctccgaattttgttacgtatgaatataggttgttctttgaagtttttgacatgagactttaccttcatgagttttgctaattccacttctaggatgtgtagatgagcatgtgaaaatattagtaatgtgcagttgtgcaggtatacaaacacaagtatcatgttacttttgccgtttttctttcttgcttagatgaagaaacataaatatatccattccagagtaatgcgcctcaggctcagtgtgcctgtgccatgtttatgacatgcacttagcacttctgtttttaaatctgctcctttggtctcaccttatttaggatctagtcttggttctagagatacccggctaacttattttgttatcagagcacattttagagtgaggggaaaccctgcttcatttttcattatgttagcagaccacattagcactaaaatgcatgaagaacttggccaagtggaatactgcagtggacaatactttgtaaaaaagaagcatcaccatttaagtaagagaatgctgagcactagaaaatttaattgttgtttatcaatggtgtcgcatggtattcttgtaccaatcatgacttttgggcactaactcctacagcagtgtaattctagtgctatgctaaacttgttcggctcagagctgttggtctgttatctttcccatttgactaagcaatggctgccattctcttcctgtccacccttccacaaggagttatttaaccgtccatttcttcagtgtgaggaactgaggactgcagggtgataagtttttggaagaacttcgaatctccacgtggactgtcagataaatttcaccacctcctagtcgccgaaatttgagatgtttatttctaataatagttgtatttccattttgccaagtgtgaatgagggggatatcacaagtattggcatggggaagaaatagctttttccaaaaaaaaaggttttgcacttcctcaaggtcaaggtctacgttatcttaaggtcttttaaaatatcttttgttgcttgaatttcttatctaggttggcttgaataaaaatggctgcgattggcataaaaggatgtcaaattctttccaccctcttcttgatcttcagtagtaattgtctattcacacaccatttctagtgcttgctgcaaaagatgtgtggccaataactcaatatggaaagggagctgccctgactgagttcacatttgtgaggactggggatttggccatactggcagccactgcagaaagatatatatccttgtccaaattttctttccacgtggatctcaataaactattcccaagcaacacagtcaaaatcttacattttttgctattcagctctttttctttgtgcaggatgttgtgttctatatttattggaaattaccctggatgtgcgttgtttgtatgaaatcattctggtttctttattgatgctcagcctctgagatggctatccaacagtttacgcacaagtccatccaataactacatattatactaattgacccacccattgagccatataaaagttcatgtaacatctggacaaaaagaggatttattcatgactcagaacatcatatttaggatcaattgaaactcactattagctgttaacacaactgaggctgactgcttacggaatatttgctacttgctagctacagtctcacacattatattataactgttgcatgcatttttttttgtagacaaggtcattcatttgtaataacgattaaagttttcaataatttgaatgatacaggactgctaacctgttaatagctcatgatatacaatttgagctgagaaactgtatggtacatctcatttttaccatgtacaattaaatttgccccatttttatgcaggttaacaaggagcttaaagatgctatgacacagctagattcaattcgttatgaagtccagaacttatctaggtttactcctggacagttcatgaggcagcataaccctggtaaatatgattattttttatcatgcttccatcccatttattctaattggtgttttgccagtactttgtttgaattatttgactaataggatctttattaactcttatcagtaggcgtggatcatgaagcagaaaaaaatgatgccgttgatggctctgcgcttaatgtatggtaacatcctgttgtcttttgaattaataagggtagttgattacctttttttctttaaatgtttaagatttgagtgtatcgaagacataactgccaaccttttcacagctcatttcagtttttaaactcttcaatagcatgttgtagtgctagtgtacacgaggtagtgctccgctagtgtcctgcataccatggataatggctggctgcttcagtgaattagattttatatttttgatatgaatggactgtaagatattgtggatatattccacgttgaattcttactccgagacctaaaacatacacaacaagcatccataggaaagataacttatttttttgctccaaaattgattcacttatttcgtatatttttgcaaatttgcctgagcatggtgtttctcctatattgctactagtcacagtcacgttaaaagcagtttattactatatatccactagttatttaacacagtttcattctgtattatattctccgtgttgaaaaatcttcttgatagaatttaatcaagttacaatgactacacagctagaagaacttcgtcatcaaatccgcagtatggttcatgatgaaattgaaagcttttataaaacaaatccagataagttttccgggaggttggataatgctgacaccgttaatagatctggtaatggtgatgccttttcttgacttaattatcacctctattattttctaatttggttttacgctatactttatttgaattcggtgactgatccttgttcgagataaaaaatcggtgactgatcactaatgagaccattactgatatatttgtaggcccagttgaaggtaaagaagctgatgtagctgttatccccacaatgttggcatcaaaggtacgagaatatcatctcttcaatttcagtacaagtggtaccatactagacatttcctttgtgcttctgtaggacatgaaattggcaaacacaggctctacagatctacacagcaaagcaacaatgtattcaagattaactgaatccccagaaatgagtggcagttctggacatcaattcaaagagagtgatgggttattaaatatactaccaatatcagctgaaagtgctggattacttccaagccgctcaggtacataaagaatgatttttgttttaaatcttcactttagcataactcgaatgtttgtacattgtaatgcagggaggtagagtggcagacagcattgccatttgcccactgtgggtcttaattgtgaacaattctttttcttcctaatgcaaatgcgctatgagccacctaagggcttgttctgttgatccccatgaggaagggattggagatagaggaggattgattccacacctattcccctccaaatccccttcaatacccttggggggattaactgaacaaggcttgagggagggattagctgaacaaggcctaaatgagctgctagaatttaacttgtgtgaaatgttcaaacggacaaagaaacaccacacatatacatagcattccgagttatgaccacaaactgtgttgttcatcccccagaattagaactcatttcttatatataattcaagcagttggcattattgtattagtaatgagagagatacctatgacaacatgaagttccatgtttacatatggggaagcttttgtccttttttgctaaagatgtgatgttctctgttcacaagaaatgcatgattaaattctattttcatggagagttttctcttgaaatttctctatgtaatggttttttctaagttagcaccaactttcataacaactcctgccccgtttatattccgacagataaaccacaaggctcagacctattactggaggcaacacttgaagcagaggtcgcagagcacgcaaaatccttcgcgcagcagcatcatgatgaactgcacaaggagtgatgcgatcttttgataggaactggtagacatcttgtacattaaaaacttcaaaaattctgactactattggagtattctgatgcccgttgagatgtaagtggacataaaggaatataagttgttgaccggcgcaaaattggtgtcaactttcataggatgatgatctgcgatggtgataccaagtagtagtagtggaaatcttgttgcttatttgattgcagcggtattatattgtcctttaattgttaagtgttcctttggcacaatatttttataggaattttgtaggatttaaattgtacggaaaactttcctattctgtcgtttgtacaaaggattgtgacatcaagaattctatggaattcctttggaatggctaagagatgggaatgttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0550900, RefSeq:Os11g0550900