BGIOSGA020728

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Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020728| Description = BGIOSGA020728| Definition = Oryza sativa Indica Group BGIOSGA020728, complete gene.| tag = | tid = BGIOSGA020728-TA|...")
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Gene Name

BGIOSGA020728

Description

BGIOSGA020728

Definition

Oryza sativa Indica Group BGIOSGA020728, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA020728-TA

Ensembl Protein ID

BGIOSGA020728-PA

Length

3559

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29099796..29103354

Sequence Coding Region

29103016..29103354,29102819..29102911,29102605..29102654,29102339..29102462,29102179..29102268
,29100896..29101180,29100651..29100773,29100284..29100538,29099796..29099867

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29099796..29103354 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29099796..29103354 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCCTCCGCCGCCGCCGCCGCCGCCGCCACCGCCTCGCCGCTGTCCCGTCTCCTGCTCAGCCTCCCAAACCCCAGCGTGAAACTTCCCGTGTCTTCTCCGAGCCGGAACGCCGGCGCCGCCGTGGCCGCCAAGAACAGCACCCCCGTCGTCGCCCTCCGCCGGCGCGAGGCCGTGGCCGCCGTGCTGTCCGCAGCCATCCTCTCCCGCGTGCTCCCCGCGGCGGCGGAAGCGTCCGGCGGTGAGTGCCCGCTCGAGGTGGCGCCCAACGGTCTCGCCTTCTGCGACCGCGTCGTCGGCACCGGCGCCGCCGCCGAGCAAGGGCAGCTCATCAAGGCGCATTACACCGGGAGGCTGGAGGACGGCACGGTGTTCGACAGCAGCTACAAGCGCGGGAAGCCGCTCACCTTCCGCGTCGGCGTCGGCGAGGATGGGACCAGGCATAGTGGGCGGCGAAGGGATCCCGCCGATGCTCGCCGGTGGAAAGAGGTCGCTGAGGCTGCCGCCGGAGCTGGCCTACGGCGCGAGAGGAGCCGGGTGCAGAGGCTGGGAGCCCACCTCCTGCGTCATCCCGCCCAACTCCACTCTCCTCTTCGACGTCGAAATGTTCAGAGTATATATCGATACCGAGTTGAGAGTTTCAGACTGAGAACATTTGCAGAGAGATTTAAGCAGCACGATCGTGGTCTACGGAACCTGTCAGATGAAGCTGTCATTGGAATTAATCCATGGTGCATCTCTGTTGACACTGCCCAGAGATATGAGCATGCATTTTCAAAGAAGCACCAGACACTGTTTCAGCTTTCTTCTGACTTGGTAGATGAAATATGGAAGGATCGTCCTCCTGTTAATGCTCTACCTGTATTTGTGCAACCTGTAGAGTATGCTGGGTGTAGTGTTACCGAAAAACTTAAGGAGTTAAGAGAAAAATTACAACATGAAAAGGCTAGGGGCATTATAATTGCTGCGCTTGATGAGGTTGCGTGGTTGTACAACATTAGAGGAAATGATGTGCACTACAGCCCAGTGGTCCATTCTTATTCTATTGTAACCTTGCACAGTGCTTTCTTTTATGTGGATAAGAGAAAAGTATCTGTTGAGGTCCAGAACTACATGACTGAGAATGGTATTGACATCAAAGACTATAATATGGTTCAATCAGATGCAAGCTTGCTTGCATCTGGACAGCTAAAAGGTTCTGCAGTCAATGGTAGCTCTCATGGGGAAAATGATATGAATGAGAATTCAAAAGTTTGGATTGATTCAAATTCATGCTGCCTTGCACTCTACTCAAAACTGGATCAATATCAAGTTCTGATGCTGCAATCACCTATTGCTCTTCCAAGGCNTGTGAAGATGCAAGAGAATTATGGAGCTTCTGGTTACTTTACTGAGGCCAAGGGATCACAGAAAAAGGAGCATATGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPSAAAAAAATASPLSRLLLSLPNPSVKLPVSSPSRNAGAAVAAKNSTPVVALRRREAVAAVLSAAILSRVLPAAAEASGGECPLEVAPNGLAFCDRVVGTGAAAEQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEDGTRHSGRRRDPADARRWKEVAEAAAGAGLRRERSRVQRLGAHLLRHPAQLHSPLRRRNVQSIYRYRVESFRLRTFAERFKQHDRGLRNLSDEAVIGINPWCISVDTAQRYEHAFSKKHQTLFQLSSDLVDEIWKDRPPVNALPVFVQPVEYAGCSVTEKLKELREKLQHEKARGIIIAALDEVAWLYNIRGNDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTENGIDIKDYNMVQSDASLLASGQLKGSAVNGSSHGENDMNENSKVWIDSNSCCLALYSKLDQYQVLMLQSPIALPRXVKMQENYGASGYFTEAKGSQKKEHM</aaseq>

Gene Sequence

<dnaseqindica>1..339#444..536#701..750#893..1016#1087..1176#2175..2459#2582..2704#2817..3071#3488..3559#ATGGCTCCCTCCGCCGCCGCCGCCGCCGCCGCCACCGCCTCGCCGCTGTCCCGTCTCCTGCTCAGCCTCCCAAACCCCAGCGTGAAACTTCCCGTGTCTTCTCCGAGCCGGAACGCCGGCGCCGCCGTGGCCGCCAAGAACAGCACCCCCGTCGTCGCCCTCCGCCGGCGCGAGGCCGTGGCCGCCGTGCTGTCCGCAGCCATCCTCTCCCGCGTGCTCCCCGCGGCGGCGGAAGCGTCCGGCGGTGAGTGCCCGCTCGAGGTGGCGCCCAACGGTCTCGCCTTCTGCGACCGCGTCGTCGGCACCGGCGCCGCCGCCGAGCAAGGGCAGCTCATCAAGGTCAGCACGACAGCACGCACCTGCCAGCCTACCGGCCGCCGCCGGCGAGGCGAGGTCTCGGGGTTCTTGCTAACCTCGCCGTGTGTTTCGTTCGTCCCACGCAGGCGCATTACACCGGGAGGCTGGAGGACGGCACGGTGTTCGACAGCAGCTACAAGCGCGGGAAGCCGCTCACCTTCCGCGTCGGCGTCGGCGAGGTAAACACGATCAATCAATCAAGCACACTAACAGATTCTGCAAGATATTCAAACATTGTACTAATCGGCAACAGATTACGCAGCTACACGATGAATTAGACTCATCTCTGATACCAAGATCACTCACATTGCATATTCACTGATAATTCTTCAGGTGATCAAAGGATGGGACCAGGCATAGTGGGCGGCGAAGGGATCCCGCCGATGCTCGCCGGTGCGTCTCCCTGCCTGAACTGAACCCTGAAAAATGACAAAAATCTGAAATGAACTCACCATACTCGATCAGATTCACCTCGATTTTGTATCAATTTAGAGTGAAATGGTGAAGCTGAATGGAAATGTGGTTGAATGTTCAGGTGGAAAGAGGTCGCTGAGGCTGCCGCCGGAGCTGGCCTACGGCGCGAGAGGAGCCGGGTGCAGAGGCTGGGAGCCCACCTCCTGCGTCATCCCGCCCAACTCCACTCTCCTCTTCGACGTCGAGTACGTCGGCAGAGCAGTCGGATGATCTCTCCCTGCAGATTTGGTTTCTTGTGTTGATTGATGTATGCAGAATGTTCAGAGTATATATCGATACCGAGTTGAGAGTTTCAGACTGAGAACATTTGCAGAGAGATTTAAGCAGCACGATCGTGGTCTACGGGTTTGAAATAGGTTATAGATTGTGAAAATTCCAAAAGCTTTGGTGAGTTTGGGCATGATCATGCACATCATGCCCAAAACTTCAATTCCAAACTACAACATTATCCTTTTTCATTAGCACCGTTTCTCGAGCTGCTAAATAATGTGTTTTTGTAAAAAAAAATATTTCTGTATATAAGTTTTTTAAAAATAAATCAAAGAAATATTTTTTTTAAGAAAGAGAGCAGCGCTCTCCCATTTCATTTACTGAAATGCAGATTACCCAAAATCAAAGAAATCTATTTTTGAAATTTATAATGTTTAGTAATTATTCATGGCCGTCTCATTTTATGTGCTAATATGCTATAATCTAATAAGGAGTTTCAACGGGCCTAAAAACATTTAGGGAGAGAATTTAGGAACACGACCATGCTGAGCGAGTTTGAACAACATTGCCTAAATGCCCAAGATATACTTTGGTGACTGATTTCGGCAAGATCGTCCACACCATCAAGCTTTCATATTCTCTCAATGATTGGTGTATACGTACGAGTTCTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAATATGGTCCTTTTCATTTTGTTAACCATATTCAGTTGTTTTGTTAATACCCCAAGCCTACTATCTTTCTTCCTGTCTGCTGTAGATTCAAGGAACTGCATGATAGTTGGTTTGATATATGGGAGTTCCTTCCAAAATTATCAGAACTACCAGAATTTTGGGCACATAAATTTATTTTGATCATACCAAATGCAAGCAGAAATTTAAAGATCTACTTGAGGCTTTTATTTTGCTAGGGAGAAAACTAAGAATAGTCATGCCAATTATTCAATGATTAGAGAGAATGGGTTTAGTTATTTGTTGATCTGCATTGCATAGCAATACTCATGATTAGCGTTTAATTTTATTCTGAATAATGTTGTTTCTAACTAACTTTTGTGGCTTGTGTTTGTTGCTGTGCAATCAGAACCTGTCAGATGAAGCTGTCATTGGAATTAATCCATGGTGCATCTCTGTTGACACTGCCCAGAGATATGAGCATGCATTTTCAAAGAAGCACCAGACACTGTTTCAGCTTTCTTCTGACTTGGTAGATGAAATATGGAAGGATCGTCCTCCTGTTAATGCTCTACCTGTATTTGTGCAACCTGTAGAGTATGCTGGGTGTAGTGTTACCGAAAAACTTAAGGAGTTAAGAGAAAAATTACAACATGAAAAGGCTAGGGGCATTATAATTGCTGCGCTTGATGAGGTACTATTAGACTTATTTATTTCTTGGTTTCTTATCCACTACAATATATTCAATTTTGATTTCTTGAGAATTTTGTCAACTTTGCCAGTTTTAATAGTTGTCCTTTTGTTATTCTTATTTAGGTTGCGTGGTTGTACAACATTAGAGGAAATGATGTGCACTACAGCCCAGTGGTCCATTCTTATTCTATTGTAACCTTGCACAGTGCTTTCTTTTATGTGGATAAGAGAAAAGTATCTGTTGAGGTCAGCTAATCCACTGAACACATTTTCTTCAATTATTCCACTATGTCGTTCATAGAATCGTAGTCATGATTTTGAGGGGCATGTAGTGAACTGTGGCTCTTGTTTGGTCCAGGTCCAGAACTACATGACTGAGAATGGTATTGACATCAAAGACTATAATATGGTTCAATCAGATGCAAGCTTGCTTGCATCTGGACAGCTAAAAGGTTCTGCAGTCAATGGTAGCTCTCATGGGGAAAATGATATGAATGAGAATTCAAAAGTTTGGATTGATTCAAATTCATGCTGCCTTGCACTCTACTCAAAACTGGATCAATATCAAGTTCTGATGCTGCAATCACCTATTGCTCTTCCAAGGCNTGTGAAGGTTTTTTTTTCTTTTGTTTTTAATTCATACCACGCCTGCTGAAAGTTTCAGAAGAANCGGGGATAGAACATTTTACACTAGAAGTGTATTTTGTTCAAGTATTCCTTTTGTTTCATTCTATTTATTTTAGGCTTTTTATCTATGGAAAATCTGCTATCTGACATTAAAAGCTTTATCATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGTCTCTCATGCGGCGTATTAGTCTTGGACTTCAAGCAAGTGTTCTTTTGCAGCTGCAAATTTGTTTAGTTGTGATGTAGTCCTTCTAATTATTTTCTACTAGCTCAGATGATCTTGTTTTAATGACAGATGCAAGAGAATTATGGAGCTTCTGGTTACTTTACTGAGGCCAAGGGATCACAGAAAAAGGAGCATATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020728

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020728&oldid=43253"