Os11g0551300

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0551300| Description = Similar to LZ-NBS-LRR class RGA| Version = NM_001074610.2 GI:297612009 GeneID:4350708| Length = 3583 bp| Definition...")
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Gene Name

Os11g0551300

Description

Similar to LZ-NBS-LRR class RGA

Version

NM_001074610.2 GI:297612009 GeneID:4350708

Length

3583 bp

Definition

Oryza sativa Japonica Group Os11g0551300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22340100..22343682

Sequence Coding Region

22340100..22340798,22341025..22342827,22343533..22343682

Expression

GEO Profiles:Os11g0551300

Genome Context

<gbrowseImage1> name=NC_008404:22340100..22343682 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22340100..22343682 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcagcgctgcttgatgtctctgaggcaccaattgatcagccgcctaataatcaagtcaagctttgggcgaggaacgtcagggagctgtcctacaacatcgaggacagcattgacaagttcatggtgcgcattgacacccatgccgcacctcacaagctgcatagcttcagggacttcattgatagaagcctagacctgctgacaaaggccaagatccgccattccatcggcaccgatatcaaagacatcaaaagccgtattaaggagattagtgagcgtcgtgatagatacaaggttgacaatgttgttaccgtaccatttagtccaactgttgatagccttcgcctatcagctttgtacaagaagatgacagaactcgttggcatcgaagagaagagcgacgagctagtcaagatgctaatggagggggacaagcaagaactgaagatagtctctattgtaggatttggtggattaggcaagacaacactagctaaagtagtgtatgaaaagcttaaagtacaattcgcttgtgggttctttgttaccatgtcacttaaccccaacatggagaagattttcagcaacatgctctgtcaactagacaaggaaaaatacagtcacgtgaccaaagcatcatggggtgaagcacaacttatcaaacgaaatacgggaattccttcaaaacaagagattcttgatgttgccaaagaagttggaggtgtttaccaactaaaacctctttctcctgctgtttcaagaaagttgttttaccaaaaaatatttggtgctgaaggcagatgtcctgttcaattagctgtagtgtctgaaggcattttaaagaaatgtggtggtgtaccattagctatcattacaatagctagtctactggccagtaaaaacgatagggataatatattagagtactggtccaaggtgtaccattctattggttctgggctagaagataatcttcatgtgaataatatgagaaagatattgtctgtcagttactataatttaccaccacatttgagggcttgtttattgtacctaagctgttatccggaggatactaacattggcaacaaagatgtgatatggaaatggatatgtgaaggttttgtgcgtgctgaacacatgaagactttgcatgttgttggaatggagtatttaaatgagctctggaacaaaagcttgatacagccaatatctaattgtgataacatgccatgggattattgtctacatgatatggtgcttgacctcatcaccttcttgtcgaacgaagagcaatttatgacatcattaggtgatcagcagccaatgctagtacctcacaagatccgccgactatccctccaatctatcaaacaagagtacttcaagctaatttcaaatgcggacctatcccatgtgagatcactgattgtgtccaagcaagcattcagtctgttaccaaacctttcgagctttccggtgttacgtgtgttggatttaagtggttgtgatcaagtggataatcgtcattgtagggatatttgcaatacgcttcacttgaggtatttgaatctacataggacatctatatctgagattccagaagagattggtaatttacagttcttgctggtattggacataactaaaactagactaagggaagtgccatcaacctttgtgcaattacaacaattggtggacctgtgtgttggccctgggatgagattaccggatgattttgggaacttgaaaactctacaaagtatatggccacatatctatgtcatgtctccaaccatgctgcgcaatatgggtggtctgaccaagctgaggcatttgtcaatacgatttcatgaatgggacgagagctaccagaaatcttttgagttgtgcctatccaacctggtcaatctcagatcaataaccgtacgtgtatatgagggagtcatggattccaaatgtgagaatttatcaccgggaccacaacagcttgaagacatcgacatgaacaggagtgtggccaattcagtaccaatctggatgtcctcattgtccttcctctcatccctagacatcaagttgaaaacattggggcataaggacctccaaatccttgggaacatgccatctcttagtgatcttaccttatgggtgaatgagcccacgcaagacagacatgaaaggttggtcatcgacaattgttatccattccactgtctaacatttcttaaactgatggctaacaacatggaggtggcgtttgcacaaggacccatgcaaaagctccaaaaactacgctttggatttggagtgcggaaaacagtggatcagtttggtaatttcgactttggactggagaagatctcagttgagcatttagatgtttgcgtcaattattccgacgccaacagatgggaggtgaacgctgcggaagctgcaatccgggaagcggtcaacatgaatcccaacaaccccacactcaagttaacaacgtggcaatacaagtggctagaacaaggttttgataagcaaatttccctgaacgtttcgctgatgtggatgacaaacttaagcctggggtgcagaaagtggagtgcagctttgcaagaactgatgtcagtcatagagtctgaacctgtgtag</cdnaseq>

Protein Sequence

<aaseq>MEAALLDVSEAPIDQPPNNQVKLWARNVRELSYNIEDSIDKFMV RIDTHAAPHKLHSFRDFIDRSLDLLTKAKIRHSIGTDIKDIKSRIKEISERRDRYKVD NVVTVPFSPTVDSLRLSALYKKMTELVGIEEKSDELVKMLMEGDKQELKIVSIVGFGG LGKTTLAKVVYEKLKVQFACGFFVTMSLNPNMEKIFSNMLCQLDKEKYSHVTKASWGE AQLIKRNTGIPSKQEILDVAKEVGGVYQLKPLSPAVSRKLFYQKIFGAEGRCPVQLAV VSEGILKKCGGVPLAIITIASLLASKNDRDNILEYWSKVYHSIGSGLEDNLHVNNMRK ILSVSYYNLPPHLRACLLYLSCYPEDTNIGNKDVIWKWICEGFVRAEHMKTLHVVGME YLNELWNKSLIQPISNCDNMPWDYCLHDMVLDLITFLSNEEQFMTSLGDQQPMLVPHK IRRLSLQSIKQEYFKLISNADLSHVRSLIVSKQAFSLLPNLSSFPVLRVLDLSGCDQV DNRHCRDICNTLHLRYLNLHRTSISEIPEEIGNLQFLLVLDITKTRLREVPSTFVQLQ QLVDLCVGPGMRLPDDFGNLKTLQSIWPHIYVMSPTMLRNMGGLTKLRHLSIRFHEWD ESYQKSFELCLSNLVNLRSITVRVYEGVMDSKCENLSPGPQQLEDIDMNRSVANSVPI WMSSLSFLSSLDIKLKTLGHKDLQILGNMPSLSDLTLWVNEPTQDRHERLVIDNCYPF HCLTFLKLMANNMEVAFAQGPMQKLQKLRFGFGVRKTVDQFGNFDFGLEKISVEHLDV CVNYSDANRWEVNAAEAAIREAVNMNPNNPTLKLTTWQYKWLEQGFDKQISLNVSLMW MTNLSLGCRKWSAALQELMSVIESEPV</aaseq>

Gene Sequence

<dnaseqindica>1..699#926..2728#3434..3583#atggaggcagcgctgcttgatgtctctgaggcaccaattgatcagccgcctaataatcaagtcaagctttgggcgaggaacgtcagggagctgtcctacaacatcgaggacagcattgacaagttcatggtgcgcattgacacccatgccgcacctcacaagctgcatagcttcagggacttcattgatagaagcctagacctgctgacaaaggccaagatccgccattccatcggcaccgatatcaaagacatcaaaagccgtattaaggagattagtgagcgtcgtgatagatacaaggttgacaatgttgttaccgtaccatttagtccaactgttgatagccttcgcctatcagctttgtacaagaagatgacagaactcgttggcatcgaagagaagagcgacgagctagtcaagatgctaatggagggggacaagcaagaactgaagatagtctctattgtaggatttggtggattaggcaagacaacactagctaaagtagtgtatgaaaagcttaaagtacaattcgcttgtgggttctttgttaccatgtcacttaaccccaacatggagaagattttcagcaacatgctctgtcaactagacaaggaaaaatacagtcacgtgaccaaagcatcatggggtgaagcacaacttatcaaacgaaatacgggaattccttcaaaacaagaggtaatgaatgatttctttgtgggttcataaattaatccacgcgaatatagttctcaaagaaacctatatagcttttgaaagagattttctaatatatgctcctttcgtattcccaaataggtattttattgttattgatgacatatggagtaatgttgtgtgggaaacaatcaaatatactttccttggaaatgaatgtggaagtaaaataattacaacaactcagattcttgatgttgccaaagaagttggaggtgtttaccaactaaaacctctttctcctgctgtttcaagaaagttgttttaccaaaaaatatttggtgctgaaggcagatgtcctgttcaattagctgtagtgtctgaaggcattttaaagaaatgtggtggtgtaccattagctatcattacaatagctagtctactggccagtaaaaacgatagggataatatattagagtactggtccaaggtgtaccattctattggttctgggctagaagataatcttcatgtgaataatatgagaaagatattgtctgtcagttactataatttaccaccacatttgagggcttgtttattgtacctaagctgttatccggaggatactaacattggcaacaaagatgtgatatggaaatggatatgtgaaggttttgtgcgtgctgaacacatgaagactttgcatgttgttggaatggagtatttaaatgagctctggaacaaaagcttgatacagccaatatctaattgtgataacatgccatgggattattgtctacatgatatggtgcttgacctcatcaccttcttgtcgaacgaagagcaatttatgacatcattaggtgatcagcagccaatgctagtacctcacaagatccgccgactatccctccaatctatcaaacaagagtacttcaagctaatttcaaatgcggacctatcccatgtgagatcactgattgtgtccaagcaagcattcagtctgttaccaaacctttcgagctttccggtgttacgtgtgttggatttaagtggttgtgatcaagtggataatcgtcattgtagggatatttgcaatacgcttcacttgaggtatttgaatctacataggacatctatatctgagattccagaagagattggtaatttacagttcttgctggtattggacataactaaaactagactaagggaagtgccatcaacctttgtgcaattacaacaattggtggacctgtgtgttggccctgggatgagattaccggatgattttgggaacttgaaaactctacaaagtatatggccacatatctatgtcatgtctccaaccatgctgcgcaatatgggtggtctgaccaagctgaggcatttgtcaatacgatttcatgaatgggacgagagctaccagaaatcttttgagttgtgcctatccaacctggtcaatctcagatcaataaccgtacgtgtatatgagggagtcatggattccaaatgtgagaatttatcaccgggaccacaacagcttgaagacatcgacatgaacaggagtgtggccaattcagtaccaatctggatgtcctcattgtccttcctctcatccctagacatcaagttgaaaacattggggcataaggacctccaaatccttgggaacatgccatctcttagtgatcttaccttatgggtgaatgagcccacgcaagacagacatgaaaggttggtcatcgacaattgttatccattccactgtctaacatttcttaaactgatggctaacaacatggaggtggcgtttgcacaaggacccatgcaaaagctccaaaaactacgctttggatttggagtgcggaaaacagtggatcagtttggtaatttcgactttggactggagaagatctcagttgagcatttagatgtttgcgtcaattattccgacgccaacagatgggaggtgaacgctgcggaagctgcaatccgggaagcggtcaacatgaatcccaacaaccccacactcaagttaacaacggtaactcacactaattcaccattcccttttgagcaatgacatgcatgtaggagtatttgtttagctaattatttgcttgcttgcttgcttgtttgttctttatccagcttttcgttctgttgtgaactttgtgatgatgcatctgacggtgcgattatcaaaaccgtcttatcccaactcccaagcacataactccctcccattccacgaaactgagcatgtcgccggctcaccactgatcaaagtccacagcggctgccgtcgagttgacagtgtgccggatctggataatatatgctgctgacaagtgacaacagcagagtagtgcttgtcatggccacagccgtgaaacatcaagcaacatcccccacacagtgcccaccactcaagttgtcgaggtggcagcggccccagccgtcgcagattgaaccattcatacctaggtttgatattattgctcctcttatttgtctcggatcaaattcttgaatgccactgctaaatggtttcctgcttgtatactcgatgatttggtttacttgatgttatctgaatatctagatctgtgcaatttatacttcagtgagttgattctgatcaatctttgcaccttggggctgccaatgatgctctagaatgaatgttaatttagttagttcatacttcatatctggttcatcgacttaatttcacaaaatattgcagtggcaatacaagtggctagaacaaggttttgataagcaaatttccctgaacgtttcgctgatgtggatgacaaacttaagcctggggtgcagaaagtggagtgcagctttgcaagaactgatgtcagtcatagagtctgaacctgtgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0551300, RefSeq:Os11g0551300