BGIOSGA020740

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Revision as of 12:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020740| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020740, complete gene.| tag = OsI_240...")
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Gene Name

BGIOSGA020740

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020740, complete gene.

LocusTag

OsI_24003

Ensembl Transcript ID

BGIOSGA020740-TA

Ensembl Protein ID

BGIOSGA020740-PA

Length

3606

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28977778..28981383

Sequence Coding Region

28981039..28981383,28980297..28980395,28979561..28979661,28979412..28979483,28979136..28979226
,28978909..28978974,28978266..28978388,28978139..28978177,28977778..28977906

Genome Context

<gbrowseImage1> name=IndicaChromosome06:28977778..28981383 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:28977778..28981383 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGTTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCTTATGTTCCTGACACCTGGTACACTGCCCTTTGAGAAATTATGGGAAAAGTTTTTACAGGGTCAGGAGGGAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGTTTGTTGGTCGTGATATTCACAGTGACGCGGTAGTATGGGGAAAGATTTCAATGGTTGATGCAGAGAAGAGACTATTGGCCAATGCACTGGCAGATGTTGATAACCAGTTCTTTGTGTTGCTTTCTGACAGCTGTGTTCCACTGCATACATTTGATTATGTCTATAATTATCTGATGGGAACAAATATCAGCTTCATTGATTGTTTCCGTGATCCTGGCCCTCATGGAAACGGGAGGTATTCTCCTGAGATGCTCCCTGAAATTGAGGAGAAAGACTTCAGGAAGGGTGCCCAGCGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MTVMPSLRHRAVAKKPKWIIILVSLVCFVLIGAYVFPPRRYSQCYLFGSGACATFKDWLPSVTRRERTDEEIISSVVLRDILAMPMPVSKNPKIALMFLTPGTLPFEKLWEKFLQGQEGRYSIYVHASREKPVHTSSLFVGRDIHSDAVVWGKISMVDAEKRLLANALADVDNQFFVLLSDSCVPLHTFDYVYNYLMGTNISFIDCFRDPGPHGNGRYSPEMLPEIEEKDFRKGAQRRHALLILADSLYYKKFKLYCKMVDPGGIANWSVTHVDWSEGKWHPRSYRAADVTYDLLKNITAVDENFHVTSDDKKLMTQKPCLWNGSKRPCYLFARKFYPETLDNLLKLFTSYTSV</aaseq>

Gene Sequence

<dnaseqindica>1..345#989..1087#1723..1823#1901..1972#2158..2248#2410..2475#2996..3118#3207..3245#3478..3606#ATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGTTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCTTATGTTCCTGACACCTGGTACACTGCCCTTTGAGAAATTATGGGAAAAGTTTTTACAGGTTGGTAAAGATATATTTGTTGCATTTGTGCTATTTAAGAGTATAAATCATTCAATGGTCATGTCGTTTCCTTTAACTGCAAAGCAACATCAGTTTCTTTTCAGCATAAATACAGACCACCAGTTGTTTCAGTGGTTAATGCTCTAGTATTGTTTTTAGATACATATTACTGAAAAATGGCACTTAATCCATATGTTGGTGTTCTTTATGAAAGTTGTAGACTTGTAGCAGTGCTTCACTATTGTATTATGAACAGCATTTTAAATTTGATAGATACTGAACTAACATAATAAAATCCGTAGGTAATGTCTTAGCCTAGCATCTTACAAGGGTCATTATATATCCTTGAGAGAAATGCTAAGGATGATTTCCATTACTGCACAAGAAGTCAAACTAGTGGATATTTCCTTATACTAGTTAACAAACCAAGCTAGTATATTATACCGCAAGTCCGCAATAACTAACAAGTGTACTTTACAAGTTACTACAATCTACCCCCAGTTTCAAAAAAAAAAAAAAAAAAAAATCTCCCCCCTCTTCTCTCCTGAACCTCTGGAAGTATATATATATTGTGATAATGCCTGTTGCTTTTATAATTCATTTAAACCTAAAAAATCTTAATAATTTTGACTTCTCCAAACAGGGTCAGGAGGGAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGTTTGTTGGTCGTGATATTCACAGTGACGCGGTAATTACTTTCATCTTCAGAAATTCTGTATTTAATGCCTTTCCTTTGATTATGTTCTTTATTAAGGATTTGACCTGCAAAATATGTCTATTTTCAAAGCTTATGTCTATCTCTCTGCATTCCAAATGACTGATGGATGTGTTAATGACCAAGTGTTAGATCTTGGTTCCATCAGAAACTTCTTTGTTTGGCTATCTAGCAAGGTAGTAGTGATGGACAAATAGTTGTTTTACACACCAGAGGACATAGCACTATAGCGACGAGCACATAACGAGCATATATTTGATAAAGATAATTTTCATAAATTTAGCATTCATTTTTCAGGATGTTCTATATCAGTAGTAGATCATGCTGTAGTAGGTTCTATGCCAATAAGGTTCTTTATCTACGCCAATAAGAATTATTTCACTCTTTTAGCTTAAGGGCTACTACTATAATGTGAGATCTAGCTATTGTAAGAACACTTCGAGCAATTTAATCTGCTGTGGAAATAACAAAAAGAAACTGTTAATTTCTTCACCTCTTAATCCTGGCAAATTGAATAACTTTGTATATTCTGTGTATTTTTCAGTAGACTTCTCAAATGGATTATTATATTGGCTTGTGTCTGAACAGAGTGCGTGGTTGCTCTGCAGGTAGTATGGGGAAAGATTTCAATGGTTGATGCAGAGAAGAGACTATTGGCCAATGCACTGGCAGATGTTGATAACCAGTTCTTTGTGTTGCTTTCTGACAGGTTCTGACTCTGATTATGGATAACGTTTTTTGGGCCTTTCTTTCACTATATTGAAGTTATCTTCCTGTTTCTTACAGCTGTGTTCCACTGCATACATTTGATTATGTCTATAATTATCTGATGGGAACAAATATCAGCTTCATTGATTGGTAAGAAGCTAAGAACACCAATTCATATTCAAATTTCATAAATGTAAAAGTAAGAGTAATAGGTGAAACAAGTTCTGTCGACATGTGATCAATAAGTTGATGTTGATTCATTCTTTCTAGTATCACTTGGAAATGGTGTTGCATGTATATGTTGATCATATTTTTCTTCATTGTTATGTTCTCAGTTTCCGTGATCCTGGCCCTCATGGAAACGGGAGGTATTCTCCTGAGATGCTCCCTGAAATTGAGGAGAAAGACTTCAGGAAGGGTGCCCAGGTAGTTTGTTGTGTTACATACCTGATTACCTGGCATTACAGTTCATTCTTTTAGCAGTATATGGTTTGTTTTTTGTTTTTTATTTTTTCATGTCGATTCTAAACTGACATGTTTTATATTGTGTTAATGTTTGTTGTTTTAATAGTGGTTTGCAATTACAGCGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGGTTTGCTGCCTATTCGAATTATCACTCTCGTGTGATATAATAGAACCAAGAATAGGATTCAACTCATGTCCCTAAAATATGATTAAGGAACTGAATATCGGTCTGATAATTACTTTCTGAAACATTTGGAAGTGGTAAACTTCTTGCGAAGTTCCTTTTCCAAGTATTTAAAATATACTAAATAAGGTCCATTCTCATGGGATCCAATTGCATTCACTTTCTTGTGTTGGCTTACAGAACACCTAAGATTCTGAAAGTGTTTGGGCTTGTCCTGTAGTCATCATTTATGAAAATCAGTGCTATATTTTTTTCTAGTTTTTTGGTACATGTTTCTGCAAGACTGATTTTTGTATGATTTGCCTTCAATGATTACAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACGTCAGTATTTATTTACAATATATTGAAGTGACATTTGATTCTTTTGGGGGCTTACTTGCTAAATACATATCATTTTGCATATCTTCAGATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGTATGTTTTTGCTTTGTTGTATGTCTCTTTTTTCCCCATAAACTCATAACAGTACGTTCTCATGCTAATTTACATTACTGTTGTGCAGGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAGTAAGTACAACAATTCTTTGTCAGTAATAGCAACTGAACAACATCACATTAATTACGCATGTTAAATGCTGTTCATTTACTTCATCTTGGATTATCATGTTACATATATAAGTGCCCTTGGTTGCCAATTTTACCATGGACTCATTGATTTCATTGCTCATATAATGCATGAAATATGAAACTGGAACAGCTAGAAAGACTGACTTGCTTTTTTTTCGCCTTCCTTTTGTAGAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020740