BGIOSGA020753

From RiceWiki
Revision as of 12:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020753| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020753, complete gene.| tag = P0677B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020753

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020753, complete gene.

LocusTag

P0677B10.15

Ensembl Transcript ID

BGIOSGA020753-TA

Ensembl Protein ID

BGIOSGA020753-PA

Length

3629

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28679826..28683454

Sequence Coding Region

28683340..28683454,28682900..28683191,28682534..28682616,28682152..28682240,28681724..28681797
,28681451..28681501,28680542..28680618,28679826..28680436

Genome Context

<gbrowseImage1> name=IndicaChromosome06:28679826..28683454 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:28679826..28683454 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACATGGACATGAGCTCGGCTTATCCTCACCATTGGCTCTCCTTCTCCCTCTCTAACAACTACCACCATGGCCTCCTTGAGGCCCTCTCTACCACATCTGCACCTCCACTTGGAGAGGAGGGGCCAGCGGAGGGCGCTCCGAAGATGGAGGATTTCCTCGGCGGCCTAGGCGGAGGCGGCGGCGCCGTCGCCGCCGCTCCGGCAGCTGCCCCGGAGGATCAGCTCAGCTGCGGCGAGCTTGGTAGCATCGCCGCCGGGTTCTTGCGCCGGTACCCAGCGCCTGAGAACGCCGGCGGGGTGACCATCGCAATGGCGACCGACGCGGCGGCGGAGCTGGCCGATCCGGCGAGGAGGACCGCCGAGACGTTCGGGCAACGGACGTCCATCTACCGTGGTGTCACTAGGCACCGGTGGACGGGGAGGTACGAGGCGCACCTGTGGGACAATAGCTGCCGCCGGGAAGGCCAAAGCCGCAAAGGCCGCCAAGGAGGGTATGATAAGGAGGAGAAGGCCGCAAGAGCTTACGACCTCGCCGCCCTGAAGTACTGGGGTCCAACTACCACGACGAACTTCCCTGTTGCCAACTACGAGACGGAGCTGGAGGAGATGAAGTCGATGACGCGGCAGGAGTTCGTCTTGTCGCTGCGCAGGAAGAGCAGCGGCTTCTCAAGAGGGGCTTCCATCTACAGAGGAGTAACAAGACATCATCAGCACGGCCGGTGGCAAGCGAGGATCGGCAGTGTGGCCGGAAACAAGGACCTGTACTTGGGCACTTTCAGCACGCAGGAGGAGGCTGCCGAGGCGTACGACATTGCCGCTATCAAGTTCAGGGGGCTCAACGCCGTCACCAACTTCGACATGAGCCGCTACGACGTCGACAGCATCCTCAACAGCGACCTGCCGGTCGGCGGCGGCGCCGCCACGCGCGCCTCCAAGTTCCCCTCTGACCCATCGCTGCCGCTGCCGTCGCCTGCCATGCCACCGTCGGAGAAGGACTACTGGTCCCTCCTTGCCCTGCACTACCACCACCAGCAGCAGCAGCAGCAGTTTCCTGCTTCTGCATTTGACACCTACGGCTGCTCCTCCGGCGTGAACGTGGACTTCACAATGGGGACAAGCAGCCACAGCGGCAGCAACAGCAACAGCAGCAGCAGCAGCGCCATATGGGGCACAGCCGCCGGCGCAGCGATGGGGAGGCAGCAAAACGGCGGCAGCAGCAACAGGCAGAGCAACAGCTACTCCGGTAACAACATTTCTTATGCTGCTGCAGCAGCTATGGCTTCTGGATCAGCACTCTACGGGGGCTCCACCGGTAGCAACGGGACATGGGTGGCGAGTAACACGAGCACGGCTCCCCACTTCTACAACTATTTGTTTGGGATGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDMDMSSAYPHHWLSFSLSNNYHHGLLEALSTTSAPPLGEEGPAEGAPKMEDFLGGLGGGGGAVAAAPAAAPEDQLSCGELGSIAAGFLRRYPAPENAGGVTIAMATDAAAELADPARRTAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPTTTTNFPVANYETELEEMKSMTRQEFVLSLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGSVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVDSILNSDLPVGGGAATRASKFPSDPSLPLPSPAMPPSEKDYWSLLALHYHHQQQQQQFPASAFDTYGCSSGVNVDFTMGTSSHSGSNSNSSSSSAIWGTAAGAAMGRQQNGGSSNRQSNSYSGNNISYAAAAAMASGSALYGGSTGSNGTWVASNTSTAPHFYNYLFGME</aaseq>

Gene Sequence

<dnaseqindica>1..115#264..555#839..921#1215..1303#1658..1731#1954..2004#2837..2913#3019..3629#ATGGACATGGACATGAGCTCGGCTTATCCTCACCATTGGCTCTCCTTCTCCCTCTCTAACAACTACCACCATGGCCTCCTTGAGGCCCTCTCTACCACATCTGCACCTCCACTTGGTAATATATGAGCATCTCAAATAATGCACTATTCATAATCTTTCATGTGCATGCATGTTTGCTAAACTAATGCCATGTGGATTAGTAGGACATGCATCTGTGTTCATCATCACTAAGTATCATTATTTTTCTGTGTTTTCTGGTGTAGGAGAGGAGGGGCCAGCGGAGGGCGCTCCGAAGATGGAGGATTTCCTCGGCGGCCTAGGCGGAGGCGGCGGCGCCGTCGCCGCCGCTCCGGCAGCTGCCCCGGAGGATCAGCTCAGCTGCGGCGAGCTTGGTAGCATCGCCGCCGGGTTCTTGCGCCGGTACCCAGCGCCTGAGAACGCCGGCGGGGTGACCATCGCAATGGCGACCGACGCGGCGGCGGAGCTGGCCGATCCGGCGAGGAGGACCGCCGAGACGTTCGGGCAACGGACGTCCATCTACCGTGGTGTCACTAGGTATATATATTTTGCGATAAAACATGGATCCATAGAGATGATCTATCTATCTAATCTAGCTACTCGATCCCAGCTCTCACAGCGCCCAAATAGCTAGGTGCATGCATGCATGTAGTTAGTTATACTACTAGCAGTACACTAACGACACTAGTAGTCGTTCATGATTAAAATGTCATTTTAACTTATAGCTAAAAATAATCATGCAAGCATGACAATGAGCTGAAAAATAATATAATCAACAAGTTTTTGATAAGGGATGTTGGGTATTGGAAAAATGCATCAGGCACCGGTGGACGGGGAGGTACGAGGCGCACCTGTGGGACAATAGCTGCCGCCGGGAAGGCCAAAGCCGCAAAGGCCGCCAAGGTTTGTGCATGCATGTCATAACCCATATCCAACAAATTAATCTGCAAATTTTAGCATATGGACGTTACATTGTTGATCACTAATTAACATTTGTACCTGCTTTTCTCCAACCTAATTTCTCACTCCATCAGTCTACTTAGGTATGTCATTATTTGCAACATCTATATATATATTTTAATTAGTTAGTTTCTTTTCCATTCGCTTCATGATAGTAGTCTTGATAGGCTTGAGAGAAGAAAAAAGTTCACCTTGAGACTTGCTGTAAAAGTTGGGGGATTAAACAAAACTTTCAGGAGGGTATGATAAGGAGGAGAAGGCCGCAAGAGCTTACGACCTCGCCGCCCTGAAGTACTGGGGTCCAACTACCACGACGAACTTCCCTGTAAGTACTTGTTGCAACAGTCAACTTATTACCAGCCCCATCAATACATTATTCGATCTTCACATATATGGCAAGAATGTATATGCTAATTCTGGTCGCTGATGATATAGCATATGAACAGTCAACGTTCATATACGCTGATACGCGTATTATACTTACCTAGTGATTACTTACTCCGTTTCATAATGTAAGTCATTTTAGCGTTGCCCACATTCATATAGATATTAATAAATTTAAACATATATGTGTATTTAGATTCATTAACATCTATATAAATATAAATATAGATAATACTAGAAAGTCTTATATTATAAAACGGAGGAAGTAGTTACCTGCACCGATCGATGACTATAGGTTGCCAACTACGAGACGGAGCTGGAGGAGATGAAGTCGATGACGCGGCAGGAGTTCGTCTTGTCGCTGCGCAGGTGAGAAACAGTAGTCATCCAGAAAGTTTATTTATTTATTTATTTATTTTGGAGAAGAAGCAGTAATCCAGAGAGGCACATCAGCACATGCTTAGGAGAAACAATCCTTTTTCCACGTACATGTGCCACTGCTTTTACTCGTACCACCTTGGGTTCTCACACTTGCACAGGTTGACCTCATTGTGTGTGTTCCTACTCTTTTTTTTTCTTTTAATTTGTCAGGAAGAGCAGCGGCTTCTCAAGAGGGGCTTCCATCTACAGAGGAGTAACAAGGTATAAGATTGATCAGAGTTAGCCACTCGGAAATAATATGATAGTATCAAGTTGCATCATTCAGACAGTTCGAGATTGCTATGAAATGTATTCTACTAAACCCTCAAATAAATAAAAACCTATAAAAATTGGATCTAAAAGTTTAGTAAATTTATGAAAATATTACAAGAGATAGATACAGATATAAAATACAATCACACTAAATTTTAAGTTTAAACTCAACTTTATTTTTACTAACAAAAATGAAAAATTTTAGGTGAATAGTAAAAGGACACTATTCATCTAAAATTTGTCTTTTTTTATTCTTTTAAATGAAATAGAGTTTACATTTGAGATTGGTATGAATGTTCATGCCTAGATCTAATTGTTTTGTAAATTTAGAGAAGTTTTAGATATTGTTTTCATGTATTTTCATTTATTTGATGATTTGCACTGGATATTTTTCTATTTTAGTGGACGTATCTAGTGAAAACCCATGAAAAATCGGCCTTAAACTGAAAATAACAGTTATACCAAATCTCAAGTTCAATTTCAATTTTACTTGGGACTAACAAAAATGACAAATTTTGGAACAGTAGTCACACCCTTCCCTTCTGTCCCCCTATCCATGTATAAAAGACCGCTTCCAGAAAAAAAAAAACGGTACAACCAAAAAAACTGGCCAGCCCAGGCAAAAATAAACCTTTTTTTCTCAAATCAAATTAAACCACGATCTCTAAATTCCGTTGTATCACGCGGGCATGCGACTAGTTCAGAGCCTCTCTTCTTCTTTTTTTTCTTTCTTAAAGTCAGAAAACTTTGTGATAATGGGAACCTAATGTTTGGCATGCAGACATCATCAGCACGGCCGGTGGCAAGCGAGGATCGGCAGTGTGGCCGGAAACAAGGACCTGTACTTGGGCACTTTCAGTAAGCTAGCCTCGACCTTTTCAAATACATATACACAAACGCTAAGACCATTGAGATGCATGGTTGTTGGCAAATTTTCCTAAATGTCCCATGCACCGCGCGCAGGCACGCAGGAGGAGGCTGCCGAGGCGTACGACATTGCCGCTATCAAGTTCAGGGGGCTCAACGCCGTCACCAACTTCGACATGAGCCGCTACGACGTCGACAGCATCCTCAACAGCGACCTGCCGGTCGGCGGCGGCGCCGCCACGCGCGCCTCCAAGTTCCCCTCTGACCCATCGCTGCCGCTGCCGTCGCCTGCCATGCCACCGTCGGAGAAGGACTACTGGTCCCTCCTTGCCCTGCACTACCACCACCAGCAGCAGCAGCAGCAGTTTCCTGCTTCTGCATTTGACACCTACGGCTGCTCCTCCGGCGTGAACGTGGACTTCACAATGGGGACAAGCAGCCACAGCGGCAGCAACAGCAACAGCAGCAGCAGCAGCGCCATATGGGGCACAGCCGCCGGCGCAGCGATGGGGAGGCAGCAAAACGGCGGCAGCAGCAACAGGCAGAGCAACAGCTACTCCGGTAACAACATTTCTTATGCTGCTGCAGCAGCTATGGCTTCTGGATCAGCACTCTACGGGGGCTCCACCGGTAGCAACGGGACATGGGTGGCGAGTAACACGAGCACGGCTCCCCACTTCTACAACTATTTGTTTGGGATGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020753