BGIOSGA020761

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Revision as of 12:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020761| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020761, complete gene.| tag = OS06G06...")
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Gene Name

BGIOSGA020761

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020761, complete gene.

LocusTag

OS06G0654000

Ensembl Transcript ID

BGIOSGA020761-TA

Ensembl Protein ID

BGIOSGA020761-PA

Length

6040

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28365387..28371426

Sequence Coding Region

28371022..28371426,28369798..28369968,28369613..28369701,28369436..28369521,28369189..28369357
,28368979..28369102,28368695..28368852,28368010..28368094,28367707..28367916
,28367556..28367617,28365387..28367067

Genome Context

<gbrowseImage1> name=IndicaChromosome06:28365387..28371426 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:28365387..28371426 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGGGGGAGGCCTCGGCGGCGGCGGGGGCGGCGGCGGTGCGGGTGGGCTGGGCCTCGACCTCTCGGCGGTGATCCAGGCGGCGGTGGTCGGCCTCGTGCTGTTCTCGGCGGCCGTCGTCGCCGTGCGCCGCGCCGCGTCGAGGTACTTCGTCGTCGACGCCGCGGGGTTCGCCGCCTCCTCGTACGACGATCACCACCACCCCCACCACCACCTCGTGATGACGCCTCGCGGGGAGGAGCAGCAGCGGCAGCAGGGCGGCGGCGCGGCGCAGGGGGCGCAAGCCGCCGCCAGTGGGGGCGGGGAGCCCTGTGCCGCGTGCGGCTACATCGCCACCAAAAAGTGCTCCGGGTGCAAGCGCGTGCGGTATTGGTGCGTCCCCTTCCTCCTCCTCCTCCTTTTCTTCTCAAGGATGTCAGTCAAAGCATTGGCAATCTGGTCACAAGTTCAAGTGCAAACAAATGAAAAAATCAGCCCTGCTGACAAGCTATCAGGTGGAGGCGATGAAGACAGAAATAAGTTATCTGGTTTTGGTCCCATCTCATTAGTACCTGCCCGTAGAAAATTAAACAAGGTCATCTTTCCATATGATGAATTTCTAAAGCTGTGCAACTGGAGGGACCTTGATTATTTACCTTGTGGCCTTTTGAATTGTGGCAACAGTTGCTTTGCCAATGTTGTTTTACAATGTCTTTCATGTACGAGGCCACTTGCAGCCTATCTCTTAGGAATGGACCATAGCAGGGAATGTTATAAGAGACATGAAGATTGGTGTTTCTTGTGCGAACTGCAATGCCATATCCAAAGGGCAAGTGAAAGTATGCATCCATTTGCGCCGAAGAACATTCTTTCTCACCTGCCAAATATAGGTGGGAACCTTGGCTTTGGTAGACAAGAGGATGCTCATGAATTCATGAGGTTTGCAATAGATAAGATGCAATCTGCTTGTCTTGATGAATTTGGAGGCGAGAAGGCTGTAGACCCTAGCACGCAAGAAACGACTCTTATTCAACACATATTTGGTGGTCGTCTGCAATCCCAGGTTCAATGTACTGCATGTGGAATGGTCTCAAATCGCTATGAGAATATGATGGACTTAACAGTTGAAATTCATGGTGATGCTGACTCCTTGGAAGAATGCTTAGATAAGTTCACTGCAGTAGAGTGGCTTGATGGTGATAATAAGTACAAATGTGATGGATGCAGCGACTATGTCAAAGCACAGAAACGTCTTACAGTTTATCAAGCTCCAAATATCCTCACAATTACTCTGAAAAGATTCCAGAGTGGTAGATTTGGGAAACTAAACAAGAGAGTTACATTCCCAATGAAGTTAGACCTAACGCCATACATGAGTAGCACTGATGGAAGTGACCAATACGATCTCTATGCTGTTGTTGTTCATCTGGATATGCTCAATGCTTCATTTTTTGGGCATTATATATGCTATATAAAAAATTACCGAGGACGCTGGTATAAAATTGATGACTGCAAGGTTATGGCTGTTGATGAGGAGGAAGTACATGCTCAAGGTGCTTATATGCTTCTATATAGCAGGAGAACAGCTCGCCCTAGGCCACTAATTGCAGTAGAAGAACTCATGAAACAGCAGCAACAGTTGAAAGTATGCCCTTTGAATGGACAAAATCATTTGATACAAGAGGATGTGCCATTAGAAGGCGTGCCATCTTTGAAACCCTCAGAAGATCTGGAAGTTGATTTTGAATCCAACAACAAATCTTTACATACTATGGACAGAGAGCCAGACCTGGATTTTCATGTGAGCTTTGATAGAGATAAGTTCACTAACAATGATATTATGCACCCACCAGTTTCAACGGTATCGCATGCCCTTGATGAAAATACTAGAGGAGATTCAGGTTTTCCATTGGAAGAATCGAACACCATGGGATCTGTGCAATTTGGCAACTCCACATATGAAACATCTTTAGTGCATTCCCCTGCAGAGCAGTGTGAAGAACCTGCGTCATGTATTGATTCAGTTGACTACATGGAAATTGACACTGAAGCTGGCGTTAAAGTTGAAAGATGGAGCAGGCCTGCCTTAGGTGATTCAGTTGGAGTGATGGGGAATGGTACATTGGTCCCGGCATTGGAGAATGGTTTGGCGGGTAAACCAATTCCTGGTTTTCCCGACAAACCCTCGAGAATAAATTCATTCTTTGCAGAAGGATGTCAAACTGGTGACAATGGTGCTGGTTCCTCGCAAGAGTTGAATGGTCATTGCAATGGAGAACCCAGTTGCCCAGAGCAAGGAGTTCTGACCAATGGTGGCAACACGCCCTCTCCAAGCACACAATGCTATGAAAATAAGTTTGCAACATCCACCAACGGCAACTATTCTATTGGGAATGGTGATACATTATCTAGCAGCAACTCATTACATGCGGGCAAACAGAATGCTGGCTTTACCTATAATGGTTTCAATCCAAAACCTTACAAAGAACCATCAGGAAGCAACACATATCTGAATAATACATGCAATGGTAAACCATCGGAAGATAATCACAATAAATGTGCCCCAAACCTGCCGGCAAAAGATTGCCAAGGGGGCATGCCATTCTTACATCGTGGCTTCCTTCTAAGGCCTTGTTCTAGGGGAAATCCAGGCAAATGTGATGATGGCTTGTCAATTAGTAATGGCACATCATCATCCTTTGTGAGTAGTAACAGCAAATCAAGTAATATTTCATCATCTCGAAATGGCGAAGGAGGCACACCATTCTTGTCTCCTAGTTTTCGCACAAATCATTGCAGAGAGTCAGCTGCCATGGACACCTCTGCAAGCTCTGTCCATGATTTGAAAACCAGCTATAACATTTCCTTGGAGCAAAAATCTATTGGTGCTGCAGTACCGTCAGTCCTGATAAAAGAAAGTTGGGGTGAAGATGGCACGACTTTTGGCACTGTTTACCAACAAAGAGCAACTTCTGTTGATAATGTAAGCAGCCGCCATGATGAAAATGGGCATGTGATTTTGGGTGCCAATAATTCCAGTTATGGAGGAGAAAACGGCAGTAATAATGGAATTCTTGATATGAATAGCAGCAGTAGCCAAAGGGACGCAGCATCTAGTACCATGATGGCTTCTGAGAAAGGCATAGGACCTAAAACAGCTGACCAAGTCAATTACATATCTGATGCACTTGAACATGATGGTTTGCGACGAAGATTAACCTCAAATTTTCCTGATCAGAATGGTATTGATGCTCAATAA</cdnaseq>

Protein Sequence

<aaseq>MLGGGLGGGGGGGGAGGLGLDLSAVIQAAVVGLVLFSAAVVAVRRAASRYFVVDAAGFAASSYDDHHHPHHHLVMTPRGEEQQRQQGGGAAQGAQAAASGGGEPCAACGYIATKKCSGCKRVRYWCVPFLLLLLFFSRMSVKALAIWSQVQVQTNEKISPADKLSGGGDEDRNKLSGFGPISLVPARRKLNKVIFPYDEFLKLCNWRDLDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRASESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPYMSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARPRPLIAVEELMKQQQQLKVCPLNGQNHLIQEDVPLEGVPSLKPSEDLEVDFESNNKSLHTMDREPDLDFHVSFDRDKFTNNDIMHPPVSTVSHALDENTRGDSGFPLEESNTMGSVQFGNSTYETSLVHSPAEQCEEPASCIDSVDYMEIDTEAGVKVERWSRPALGDSVGVMGNGTLVPALENGLAGKPIPGFPDKPSRINSFFAEGCQTGDNGAGSSQELNGHCNGEPSCPEQGVLTNGGNTPSPSTQCYENKFATSTNGNYSIGNGDTLSSSNSLHAGKQNAGFTYNGFNPKPYKEPSGSNTYLNNTCNGKPSEDNHNKCAPNLPAKDCQGGMPFLHRGFLLRPCSRGNPGKCDDGLSISNGTSSSFVSSNSKSSNISSSRNGEGGTPFLSPSFRTNHCRESAAMDTSASSVHDLKTSYNISLEQKSIGAAVPSVLIKESWGEDGTTFGTVYQQRATSVDNVSSRHDENGHVILGANNSSYGGENGSNNGILDMNSSSSQRDAASSTMMASEKGIGPKTADQVNYISDALEHDGLRRRLTSNFPDQNGIDAQ</aaseq>

Gene Sequence

<dnaseqindica>1..405#1459..1629#1726..1814#1906..1991#2070..2238#2325..2448#2575..2732#3333..3417#3511..3720#3810..3871#4360..6040#ATGCTGGGGGGAGGCCTCGGCGGCGGCGGGGGCGGCGGCGGTGCGGGTGGGCTGGGCCTCGACCTCTCGGCGGTGATCCAGGCGGCGGTGGTCGGCCTCGTGCTGTTCTCGGCGGCCGTCGTCGCCGTGCGCCGCGCCGCGTCGAGGTACTTCGTCGTCGACGCCGCGGGGTTCGCCGCCTCCTCGTACGACGATCACCACCACCCCCACCACCACCTCGTGATGACGCCTCGCGGGGAGGAGCAGCAGCGGCAGCAGGGCGGCGGCGCGGCGCAGGGGGCGCAAGCCGCCGCCAGTGGGGGCGGGGAGCCCTGTGCCGCGTGCGGCTACATCGCCACCAAAAAGTGCTCCGGGTGCAAGCGCGTGCGGTATTGGTGCGTCCCCTTCCTCCTCCTCCTCCTTTTCGTGTGTAACTTGTAGTGGTCTTGTACCGCATATACGATCTTAGAGTCTCACCTAGTTCCTTCCCCGCGAAATTCGTCACTTCGTGTGTGCAATTGGGGGTGGCGTCTGGCGCAGGCAACGGTACCAGGATCTTGCACGGGGTTCTTGGTCAAGCTATGGTTGTCCTGGCTGTGAATTGTGATTTTATTACTGCTGTTTCTTTAAGTTCTTGGGGGAATTGGTGTTTCGGAGTCTTGTGGTTCGTGTGAGCGGATATGCGTAATTGTTGGGCTACTGCGGTTTGAATGCTATGACGAGGGCGCTTGAATTTGGATGGAATATGCGGAGAGATGATCTTGTCTCTTATGTGATCTTGTGCCTAATTTGCGTGATTGGATTGGTTGTTTGTGTTGTAATGGCTGTTAGTATTAGGAGAAACTTTGGGTTCTTGTTTGTCGCGTTGAATGTGGTTCACAACTTCACCCTGCAGTGAAGTTTTTAGTTTCTCATTTACTGGTTTTTGAATGAGTAAGCATCACAGCAGATAGTCCACGATTAATCTGTTATTTTGGCCAATGTGTGCAGTCACACCAGAAGAAAGTGTTTCTTGGTGTATAGTATGTTTTGTTTGTTGCCATTTACAAACTTGTGAAATTTTGGTGTCACCAAATTTTGGTAAGGCGATAAACCCAACATACTCCAACATCACAGCCACACCAAACTTAGGTAATTCCGGAAGATTACACTCTTGATAACTACACCCAATTTAATATGGCTTCAGATGAAACACTCCCCCACATTGCTCTTCCTCACAAAAAAATGGGTAATGGTTAGGTTTATTTTGTCAATAAGTAAAACATGCCCAACATTTGGATGATCCTATTATTGCAAAACATTGTATAATCTGATCTTTCAAGGTTCTACTGCACTGGAATAGACTTGCATTGTTTTGCCACATAATAAGGGTTACATGACTCCATGATTCACAATTACCGAACCCTGTTTCCCTAGTATCTTTGATAACCATGCTCACCATATTTCTGGACCTGAACATCAGTTTGTGCACTTATTCAGTTCTCAAGGATGTCAGTCAAAGCATTGGCAATCTGGTCACAAGTTCAAGTGCAAACAAATGAAAAAATCAGCCCTGCTGACAAGCTATCAGGTGGAGGCGATGAAGACAGAAATAAGTTATCTGGTTTTGGTCCCATCTCATTAGTACCTGCCCGTAGAAAATTAAACAAGGTGAATGATTGTGCTCTTAATCCAAAACCGTGTGTGTGACATGCCAAAATGTATATTTATGTAGTTTAACATTTTTCACTAATGTTTCATATGCAGGTCATCTTTCCATATGATGAATTTCTAAAGCTGTGCAACTGGAGGGACCTTGATTATTTACCTTGTGGCCTTTTGAATTGTGGCAACAGGTATAATAGAATAGTACTATATTGCACTTATGTCTGTTTGCTTTGCAAATACCTCCTTAAATCCATAATATATCGTGTTTTATCTGTGCAGTTGCTTTGCCAATGTTGTTTTACAATGTCTTTCATGTACGAGGCCACTTGCAGCCTATCTCTTAGGAATGGACCATAGCAGGGAATGTAAGTGCTATCTTCCCATGACTATGTAAGGAAGTCTAGTTTTACACTTAAACAATGTTCAACATCTCTACCTTTCAGGTTATAAGAGACATGAAGATTGGTGTTTCTTGTGCGAACTGCAATGCCATATCCAAAGGGCAAGTGAAAGTATGCATCCATTTGCGCCGAAGAACATTCTTTCTCACCTGCCAAATATAGGTGGGAACCTTGGCTTTGGTAGACAAGAGGATGCTCATGAATTCATGAGGTGAATTTTCTTATCTCTTAATCTTTTGTCAGCTTGGCCTCTTTTGAACCGCCTTCCCAATGTTGAATAATTCATTGTACCCATAGGTTTGCAATAGATAAGATGCAATCTGCTTGTCTTGATGAATTTGGAGGCGAGAAGGCTGTAGACCCTAGCACGCAAGAAACGACTCTTATTCAACACATATTTGGTGGTCGTCTGCAATCCCAGGTTTCTTCTGTTTCTGTTAGATATAGGGTTTCAATCTACAGTGTTTGAGTTTGGCTTTTTTGGCACCCTATTTTCAATCCGCTCTAAACTCCCATGAATATGGCCTAACTGAAAGGACATGTGTAGGTTCAATGTACTGCATGTGGAATGGTCTCAAATCGCTATGAGAATATGATGGACTTAACAGTTGAAATTCATGGTGATGCTGACTCCTTGGAAGAATGCTTAGATAAGTTCACTGCAGTAGAGTGGCTTGATGGTGATAATAAGTACAAATGTGATGGGTAAGTGAACAATATTTTCTGCAATTTTGTGCGTCAATGGTATCTACACACGTCCAAATCCTGCAGGGGCATAATAGTTTTAATCATGCCCATCAGTGAAAGCAATGGTTTGACCATCCGTTGAAATTAGCTTTTCCTCTTCTTTTTGGAGAGATTAGTTTTTCCTTACTATTGATCACTACAGAATGATCTCATTTTGGTCCACTTAAGTCTCATCTAAAATTCATTAATATGAATTACTTTGACGATAATATATAGGAAGGAATAGTTGAACTTGGGTCTAGTATTTGAATCAATATAAATAGCTTGTGAGTTTGTGGCCACATTCTTAGTCTAAATTCTATTAGTTGGTTTAAGATGGAGTGTTTTTAATATGATAGCTGTCTGGAATCACCCAAGCGTTGTCATTCTCACGAATTCAACCCGAGGAAGATTTTATGGTAATAGTGCCATCTCCCATCAATATATGGACTAGGACATTGGTTAATACACCACTTATATTTTGTCTGCTATTGAGCTCCTCTCTCTCTCTCTCCCTCTGTCTATATACATCAAATGTTCCTTTTTTTTCGCTCTAATGCATTGGTTGCTTTTATACAGATGCAGCGACTATGTCAAAGCACAGAAACGTCTTACAGTTTATCAAGCTCCAAATATCCTCACAATTACTCTGAAAAGATTCCAGGTTAGGACAGCAGCTTGTTGTAACTATATCAATGCAATTGTATACTTGTATTATGACATACTTGGATAACAAGCTTTCATATGGTTATCACAGAGTGGTAGATTTGGGAAACTAAACAAGAGAGTTACATTCCCAATGAAGTTAGACCTAACGCCATACATGAGTAGCACTGATGGAAGTGACCAATACGATCTCTATGCTGTTGTTGTTCATCTGGATATGCTCAATGCTTCATTTTTTGGGCATTATATATGCTATATAAAAAATTACCGAGGACGCTGGTATAAAATTGATGACTGCAAGGTACGTGTTCACCTTTTTATGTTATTAGTATATGACCATATGAATACTTGTCATAGTCAGTGATACTACTTGCCTACTTTTGTTTGTAGGTTATGGCTGTTGATGAGGAGGAAGTACATGCTCAAGGTGCTTATATGCTTCTATATAGCAGGTAATTTTTATTAGAATGATTATGTTAATGCCTGTTGCCATCATATGTCCATTGTATTGGGAAATTCTACCTTCTAAATTTGCCGTACTCTTTGAATCTTGTGATATTCTTTATATCAACAAGACAACAGTAGCAATCAAGATAGTGGAAGTACATTATTAAAGCAACCTAACCTAAATCATCAAGTATGAACTGTTTAATTACCAATGAGACAGGCTCATAACTCAGACTTGCTTCCCATATTGCTCTGTTGTTGACTTATCTGTTTTAGGCTTGTTAGCTTAACAGCTGTATGACAGAACTTTCATAATCACTTTTTTTTTTATCTTACCATGTTTGCATTTTTCTTCTTATGCTCAATATTTTGTTTTCTCCAACTAATGAACCTCTTCACAGGAATCTAACAAATATTACTTGTCTGATGTTGAGAGCAATGCTTATTGTTCTGGATCTGACATTCTCTGCTTTGTCTTTATGATCATCTGCAGGAGAACAGCTCGCCCTAGGCCACTAATTGCAGTAGAAGAACTCATGAAACAGCAGCAACAGTTGAAAGTATGCCCTTTGAATGGACAAAATCATTTGATACAAGAGGATGTGCCATTAGAAGGCGTGCCATCTTTGAAACCCTCAGAAGATCTGGAAGTTGATTTTGAATCCAACAACAAATCTTTACATACTATGGACAGAGAGCCAGACCTGGATTTTCATGTGAGCTTTGATAGAGATAAGTTCACTAACAATGATATTATGCACCCACCAGTTTCAACGGTATCGCATGCCCTTGATGAAAATACTAGAGGAGATTCAGGTTTTCCATTGGAAGAATCGAACACCATGGGATCTGTGCAATTTGGCAACTCCACATATGAAACATCTTTAGTGCATTCCCCTGCAGAGCAGTGTGAAGAACCTGCGTCATGTATTGATTCAGTTGACTACATGGAAATTGACACTGAAGCTGGCGTTAAAGTTGAAAGATGGAGCAGGCCTGCCTTAGGTGATTCAGTTGGAGTGATGGGGAATGGTACATTGGTCCCGGCATTGGAGAATGGTTTGGCGGGTAAACCAATTCCTGGTTTTCCCGACAAACCCTCGAGAATAAATTCATTCTTTGCAGAAGGATGTCAAACTGGTGACAATGGTGCTGGTTCCTCGCAAGAGTTGAATGGTCATTGCAATGGAGAACCCAGTTGCCCAGAGCAAGGAGTTCTGACCAATGGTGGCAACACGCCCTCTCCAAGCACACAATGCTATGAAAATAAGTTTGCAACATCCACCAACGGCAACTATTCTATTGGGAATGGTGATACATTATCTAGCAGCAACTCATTACATGCGGGCAAACAGAATGCTGGCTTTACCTATAATGGTTTCAATCCAAAACCTTACAAAGAACCATCAGGAAGCAACACATATCTGAATAATACATGCAATGGTAAACCATCGGAAGATAATCACAATAAATGTGCCCCAAACCTGCCGGCAAAAGATTGCCAAGGGGGCATGCCATTCTTACATCGTGGCTTCCTTCTAAGGCCTTGTTCTAGGGGAAATCCAGGCAAATGTGATGATGGCTTGTCAATTAGTAATGGCACATCATCATCCTTTGTGAGTAGTAACAGCAAATCAAGTAATATTTCATCATCTCGAAATGGCGAAGGAGGCACACCATTCTTGTCTCCTAGTTTTCGCACAAATCATTGCAGAGAGTCAGCTGCCATGGACACCTCTGCAAGCTCTGTCCATGATTTGAAAACCAGCTATAACATTTCCTTGGAGCAAAAATCTATTGGTGCTGCAGTACCGTCAGTCCTGATAAAAGAAAGTTGGGGTGAAGATGGCACGACTTTTGGCACTGTTTACCAACAAAGAGCAACTTCTGTTGATAATGTAAGCAGCCGCCATGATGAAAATGGGCATGTGATTTTGGGTGCCAATAATTCCAGTTATGGAGGAGAAAACGGCAGTAATAATGGAATTCTTGATATGAATAGCAGCAGTAGCCAAAGGGACGCAGCATCTAGTACCATGATGGCTTCTGAGAAAGGCATAGGACCTAAAACAGCTGACCAAGTCAATTACATATCTGATGCACTTGAACATGATGGTTTGCGACGAAGATTAACCTCAAATTTTCCTGATCAGAATGGTATTGATGCTCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020761