Os11g0552100

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0552100| Description = Protein of unknown function DUF724 family protein| Version = NM_001074615.1 GI:115485878 GeneID:4350713| Length = 49...")
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Gene Name

Os11g0552100

Description

Protein of unknown function DUF724 family protein

Version

NM_001074615.1 GI:115485878 GeneID:4350713

Length

4951 bp

Definition

Oryza sativa Japonica Group Os11g0552100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22375730..22380680

Sequence Coding Region

22375917..22376893,22376984..22377122,22377190..22377311,22377386..22377440,22377532..22377648
,22377742..22378437,22380214..22380543

Expression

GEO Profiles:Os11g0552100

Genome Context

<gbrowseImage1> name=NC_008404:22375730..22380680 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22375730..22380680 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctacctcgtcgagtactccgatctggagaagggggaaggggaggccgtggccaaggcggtggagtacctgcactggcggttcatcaggccgtccgaggagcgctcgccgcgggattgcgatttccggattggccccggcgccgccgtcgaggcctactgcgacggggcatggtcgcccggcgtggtgcggagcgtcgtcggcgagggtgagtatgaggtaagtgtcaatggaaagaccaaggaggttgtggtgaccaaggtgcgggagctgcttcagcctcagtacaagtggaatggcaagaactggaggattgtctctgctaagagacacttgaggcagcagtctatgtctggaaaaagcccaagctcaccagttgatgtgttctccagtgatgatgaacatagacatgatactgaatcttctgcccggagaaggtcaataaaaaggtcaaggaaggagttcaatgcaacgcagcaacctgaaggcatgttacctgaagattctgaggatgtttcacattctgagatgaacactcctttatctgaattatgcaagtcatcgggaagcaatcattctccaaagtcttgctctgacccatctggaatgaaaaaaattcaagtgctttcgaagaagatagtgagtaactgtttggtaccagtgaaggggattcttgatgcttcgacaggacatagaatacctcagaatgaatcaagagaagatggtattgggaagacaatggttaatcaagaaattatatctgacatgatgcttacgaatggtcaggctaatacatctgcttgtggaacaagtatgaatgaaggctatgctatgctttcaactaaaaagtttggaaaacagaaaatggcattatctcgcagatacaatcctgtacggaaggcacggggagggctgctctctgtccagcaactacacactaaaaaaatcatgccttccgagctcaaacggggtaaaatgagacttattcatgcacttcaggacatgaacgatccctctgataatattcagttaaagggaaacagtacttctccaagcagagaaattatttgtgctttgagtgtctcttcacaatgcaataccccatctcctctgggtaaacaaataaaggcttttgacttcgtgtcaagagaggctgatagtggttcaaatactaagtttcttatcttgaagaaatttgctagaaagaagggctccaaagaatcagatagcccacataactcattggatgcaaccagtactgtccagccaatacgtagaaagaaagctgcagggcgactgaaaggatcttctgtggagagacagttggagggtgaaactcatattcagcagcagcttaataaggctttggaggataacctgaatgcaaatgaagtaacaaatcaagaactgttgccactaacacctccaggctttgaatcagttgtcaatggaaaacgttctcgtgattggaacactgatggtttctctgaagttaacttaaattctagtctgttcgatgaagagctgactgctacaatcaatagcatttgtcaagataatcataatagagatgcagaatctgacaatgtggctaccgaagtagctgaaatcagccatcttatggagaaatctatgttacctcttgactgttcagttgggcatgaggtgggtgggaaagtgggacagggatcaatccaattacatattgggaacagtgggagtttgccgtgcaccagtgacaatgccatattaaggcgctgctcatttggtgggaattctatggtctcagatatatctaagtgtcaactcactggtcagcaggccccattcaccaagaggtcccatgtttggtctttatttgaagagatggatgtgtttcgaaagatgccacagcagccacatttccttccactcaagcaccatccactagggctgcgtgaaggaacggctttaggtctaatgtggtcatatactgatgcagtggataatataagtaaattatgcataacggacagcatggaaatatttgaagaccacatcaaaacacttaccattttagaagaaaatggattcagtgttcagtctttgcagcagattctgaccaaattgctccagatcagatcagattacaccaattctctcagagacggggagaaactgaaagaacagatagcggataaggcctttgctgtgtcccgtgttgatgctctgcttgatgaaaatgatagtgctatagccaagcttgaacaggaacttgggaaactccgatggaaaggccagaagatgtcaaagaaaaaggaggatgaagatgcagagctgtcaagactgaaggcggagaataacaatgctgaggaagcacacggtgatgctaaacgacagtttgacagcatccgggctgagctgcggcaacacttagcaattgatagtcagtaa</cdnaseq>

Protein Sequence

<aaseq>MSYLVEYSDLEKGEGEAVAKAVEYLHWRFIRPSEERSPRDCDFR IGPGAAVEAYCDGAWSPGVVRSVVGEGEYEVSVNGKTKEVVVTKVRELLQPQYKWNGK NWRIVSAKRHLRQQSMSGKSPSSPVDVFSSDDEHRHDTESSARRRSIKRSRKEFNATQ QPEGMLPEDSEDVSHSEMNTPLSELCKSSGSNHSPKSCSDPSGMKKIQVLSKKIVSNC LVPVKGILDASTGHRIPQNESREDGIGKTMVNQEIISDMMLTNGQANTSACGTSMNEG YAMLSTKKFGKQKMALSRRYNPVRKARGGLLSVQQLHTKKIMPSELKRGKMRLIHALQ DMNDPSDNIQLKGNSTSPSREIICALSVSSQCNTPSPLGKQIKAFDFVSREADSGSNT KFLILKKFARKKGSKESDSPHNSLDATSTVQPIRRKKAAGRLKGSSVERQLEGETHIQ QQLNKALEDNLNANEVTNQELLPLTPPGFESVVNGKRSRDWNTDGFSEVNLNSSLFDE ELTATINSICQDNHNRDAESDNVATEVAEISHLMEKSMLPLDCSVGHEVGGKVGQGSI QLHIGNSGSLPCTSDNAILRRCSFGGNSMVSDISKCQLTGQQAPFTKRSHVWSLFEEM DVFRKMPQQPHFLPLKHHPLGLREGTALGLMWSYTDAVDNISKLCITDSMEIFEDHIK TLTILEENGFSVQSLQQILTKLLQIRSDYTNSLRDGEKLKEQIADKAFAVSRVDALLD ENDSAIAKLEQELGKLRWKGQKMSKKKEDEDAELSRLKAENNNAEEAHGDAKRQFDSI RAELRQHLAIDSQ</aaseq>

Gene Sequence

<dnaseqindica>3788..4764#3559..3697#3370..3491#3241..3295#3033..3149#2244..2939#138..467#cggaggcggcgatcgcgctccagcccaagcaggcggttagggtttaccaggtcggggacaaggtggaggtgaggagggaccgggaggtgtacggccactcgtggttccacgccaaggtggccaaggtgatcgacaggatgagctacctcgtcgagtactccgatctggagaagggggaaggggaggccgtggccaaggcggtggagtacctgcactggcggttcatcaggccgtccgaggagcgctcgccgcgggattgcgatttccggattggccccggcgccgccgtcgaggcctactgcgacggggcatggtcgcccggcgtggtgcggagcgtcgtcggcgagggtgagtatgaggtaagtgtcaatggaaagaccaaggaggttgtggtgaccaaggtgcgggagctgcttcagcctcagtacaagtggaatggcaagaactggaggattgtctctgctaaggtaatgctaaaatctatatgtaacctgtgcttgctagttttctttgtttcagtttgcttgctgttgtgagcttgtggctgatgttgatactgtgtgcttcactgctaatgcatggatcaggatgaattatgattggttttgtaatttttggagttaaataaatgaaaagaatcgcatgtgagttacatgccatctaaatattctgtgttagttcatttaaatgggatgattaaaataacttactatgtgttcctttaattacatcaaaccttcagcccactattcttgaaatatgtatcttttgagttttaggacatgaaactctctggcttctaagctatttattgaagaactgttgagtaggtatatgtaggtttgcttgaatattgaaccatcaatttgatcagggtgattattggatttttttcccacttgttgacttgttccatgtttattcactaggagtcctgctaaatacgttttcacattcttgactagatacttttaagaaaaattcatggtacagcccccccccccccacttttttctttttttttttttgaaaaaaaatcaccctctttgaacaatgctcataacctcttgaaaacatgatgccttgttgttttaggcctgacatagtgcagcaagaagtttcaagcaaacttatgtttaacgagtgattgaacagcaagcattttgtcgaatgcttcacccttgtactgaaaaacatgctcaatttttgttgtattgtctccacaactttgttcttcaccattgtaattttcatctgggatagttggggtacgatgggtctgtgtaccatatggctaaggtcagcgcgatgttttgtgggctgttgttaaagtcctggatacttgtgaaatctgctttggtatatcggattaagcaagctgttgttttcatatttcagaattatttttaaattgtacctggtagttgtgcagaattcccacatagtttggagacgttttgtctgaacttaggaaacaatatctcttgtatgcatgcatgattgaattcagacaattgttggtttcacagttggtttgaaatgtttggtccatcgttatcttgtagatatttgtttttgcattaattttctgtattcgtaaactaaaataatttcagctaaaaccggaaaacctattatacagagaaaatcatatagaactgaaaaactctcatctacatatcaagaaaatttcacaataagacaaaactttcaacagagatacaaatgggcaacttttaaaataatagtaaaactttctatcagcaataaaattcttccttttaacaaaaacgaatctgtggatattgccattcaatgatctaaaaaattgtaccagtgggcccatagccaaacaagtaacagaaaaaacataaaaactgggatcatatgctaaacatgggaaaaggggggaaaaaagaaagctgcatttaatggggaaaatgggattgcatgtcacggtggaatgtgaaaagctcatttcgatgtaatggtgagagcagaagaaaggaaacacatataggctagagaactgtttgttggccacgaatgtgcagccatgacatattatgattatgtttacagtacccaaatacatggattagcagtcatacacattgatctgttcattcatgttcatatttttgctattgttcttacatgcattggtttctctatgattgttgtttcaatagcttgtacgtcaacttgcatgatccactcatgatgtttctttacctgtacagagacacttgaggcagcagtctatgtctggaaaaagcccaagctcaccagttgatgtgttctccagtgatgatgaacatagacatgatactgaatcttctgcccggagaaggtcaataaaaaggtcaaggaaggagttcaatgcaacgcagcaacctgaaggcatgttacctgaagattctgaggatgtttcacattctgagatgaacactcctttatctgaattatgcaagtcatcgggaagcaatcattctccaaagtcttgctctgacccatctggaatgaaaaaaattcaagtgctttcgaagaagatagtgagtaactgtttggtaccagtgaaggggattcttgatgcttcgacaggacatagaatacctcagaatgaatcaagagaagatggtattgggaagacaatggttaatcaagaaattatatctgacatgatgcttacgaatggtcaggctaatacatctgcttgtggaacaagtatgaatgaaggctatgctatgctttcaactaaaaagtttggaaaacagaaaatggcattatctcgcagatacaatcctgtacggaaggcacggggagggctgctctctgtccagcaactacacactaaaaaaatcatgccttccgagctcaaacggggtaaaatgagacttattcatgcacttcaggacatgaacgatccctctgataatgtgagtcccatctgttgtgttttgtacttgaattacttcttacatgcagataatttttaatttatggccatttgaatctttttgctggtccagattcagttaaagggaaacagtacttctccaagcagagaaattatttgtgctttgagtgtctcttcacaatgcaataccccatctcctctgggtaaacaaataaaggcttttgacttcgtaagtcttgtgctgttgacttttacgaacttatccatcctgaatccatattcatgagcagtttttgtgctgcttgtcaatctgtttgcaggtgtcaagagaggctgatagtggttcaaatactaagtttcttatcttgaagaaatgtaagtagtttgtctagtactgttctatcaacaagatgatgcatcaaatctaacaactgatgtacaatctgcagttgctagaaagaagggctccaaagaatcagatagcccacataactcattggatgcaaccagtactgtccagccaatacgtagaaagaaagctgcagggcgactgaaaggatcttctgtggaggtatgaaacttgtcttgatcacatatttccatcgactgccacattctcactctggtatcctgttcagagacagttggagggtgaaactcatattcagcagcagcttaataaggctttggaggataacctgaatgcaaatgaagtaacaaatcaagaactgttgccactaacacctccaggctttgaatcagttgtcaatggaaaacgtatgttctgggaactctatctttgctgtaaatgttcacttattttgttgcattcaatgtagcagttttctaatgatgttttttttgcaggttctcgtgattggaacactgatggtttctctgaagttaacttaaattctagtctgttcgatgaagagctgactgctacaatcaatagcatttgtcaagataatcataatagagatgcagaatctgacaatgtggctaccgaagtagctgaaatcagccatcttatggagaaatctatgttacctcttgactgttcagttgggcatgaggtgggtgggaaagtgggacagggatcaatccaattacatattgggaacagtgggagtttgccgtgcaccagtgacaatgccatattaaggcgctgctcatttggtgggaattctatggtctcagatatatctaagtgtcaactcactggtcagcaggccccattcaccaagaggtcccatgtttggtctttatttgaagagatggatgtgtttcgaaagatgccacagcagccacatttccttccactcaagcaccatccactagggctgcgtgaaggaacggctttaggtctaatgtggtcatatactgatgcagtggataatataagtaaattatgcataacggacagcatggaaatatttgaagaccacatcaaaacacttaccattttagaagaaaatggattcagtgttcagtctttgcagcagattctgaccaaattgctccagatcagatcagattacaccaattctctcagagacggggagaaactgaaagaacagatagcggataaggcctttgctgtgtcccgtgttgatgctctgcttgatgaaaatgatagtgctatagccaagcttgaacaggaacttgggaaactccgatggaaaggccagaagatgtcaaagaaaaaggaggatgaagatgcagagctgtcaagactgaaggcggagaataacaatgctgaggaagcacacggtgatgctaaacgacagtttgacagcatccgggctgagctgcggcaacacttagcaattgatagtcagtaaccatcctgatgagtcccaacttaggcactgtatgctgggtgcttatctaagactaggaaccctgcctgttgaatgtgtcagtcctgacctattatttctagaccatctatctgtgctaatctgatctacctatctctgtacttatttcttcctaaaatttgccagctatctgctgttattagttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0552100, RefSeq:Os11g0552100