BGIOSGA020806

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Revision as of 12:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020806| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020806, complete gene.| tag = OsJ_221...")
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Gene Name

BGIOSGA020806

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020806, complete gene.

LocusTag

OsJ_22116

Ensembl Transcript ID

BGIOSGA020806-TA

Ensembl Protein ID

BGIOSGA020806-PA

Length

3874

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27328748..27332621

Sequence Coding Region

27331698..27332621,27328748..27328840

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27328748..27332621 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27328748..27332621 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGATTTCCAGTCTACCTGCTCTTCCTCGCTGCCCTGATCATCCTTCCCATGGCCAACCTCATCCGTTCTGCACGCCACCGGCGTCTTGCCGGCGCACGGCGGCCGCCGCCGGGGCCGTGGGCGCTCCCGGTGATCGGCCACCTCCACCACCTCGCCGGCAAGCTCCCGCACCACCACAAGCTGCGTGACCTCGCCGCGCGCCACGGCCCGCTCATGCTGCTCCGCTTCGGCGAGCTCCCCGTCGTGGTGGCCTCGTCGGCGGGCGCGGCGCGGGAGATCACGAAGACGCACGACCTCGCCTTCGCGACGCGCCCCGTCACCCGGACGGCGCGGCTGACCCTGCCGGAGGGAGCCGAGGGCATCATCTTCGCGCCCTACGGCGACGGGTGGAGGCAGCTCCGGAAGATCTGCACCCTCGAGCTCCTCAGCGCCCGCCGCGTGCAGTCCTTCCGCGCCGTCCGCGAGGAGGAGGTCCGGCGCCTCCTCCTCGCCGTGGCGTCGCCGTCGCCGGAAGGGACGACGGCGACGGCGAGTGTCGTCAACCTGAGCAGGATGATATCGTCGTGCGTCGCCGACTCGTCGGTGCGCGCCATCATCGGAAGCGGCCGGTTCAAGGACAGGGAGACGTTCCTCCGGCTGATGGAGCGAGGGATCAAGCTGTTCTCCGGCCCGAGCTTGCCTGACCTCTTCCCGTCGTCGCGGCTGGCCATGCTCGTCAGCCGAGTTCCTGGCCGCATGAGGCGGCAGAGGAAGGAGATGATGGAGTTCATGGATACCATCATCGAGGAGCATCAGGCGGCGCGCGAGGCCTCCATGGAGCTCGAGAAAGAGGACCTGGTAGACGTACTCCTAAGAGTTCAGAGAGATGGTAGCCTTCAGTTTTCCCTCACCACGGACAACATCAAAGCTGCCATTGCTAGGCCAAATCAGTATCAGCTCCACAACCTCAGGGCAGTAGGACACTCTGTTTGGCTGGGCTATAACTTTTCAGATAAACAGATAATTAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAGFPVYLLFLAALIILPMANLIRSARHRRLAGARRPPPGPWALPVIGHLHHLAGKLPHHHKLRDLAARHGPLMLLRFGELPVVVASSAGAAREITKTHDLAFATRPVTRTARLTLPEGAEGIIFAPYGDGWRQLRKICTLELLSARRVQSFRAVREEEVRRLLLAVASPSPEGTTATASVVNLSRMISSCVADSSVRAIIGSGRFKDRETFLRLMERGIKLFSGPSLPDLFPSSRLAMLVSRVPGRMRRQRKEMMEFMDTIIEEHQAAREASMELEKEDLVDVLLRVQRDGSLQFSLTTDNIKAAIARPNQYQLHNLRAVGHSVWLGYNFSDKQIIS</aaseq>

Gene Sequence

<dnaseqindica>1..924#3782..3874#ATGGCTGGATTTCCAGTCTACCTGCTCTTCCTCGCTGCCCTGATCATCCTTCCCATGGCCAACCTCATCCGTTCTGCACGCCACCGGCGTCTTGCCGGCGCACGGCGGCCGCCGCCGGGGCCGTGGGCGCTCCCGGTGATCGGCCACCTCCACCACCTCGCCGGCAAGCTCCCGCACCACCACAAGCTGCGTGACCTCGCCGCGCGCCACGGCCCGCTCATGCTGCTCCGCTTCGGCGAGCTCCCCGTCGTGGTGGCCTCGTCGGCGGGCGCGGCGCGGGAGATCACGAAGACGCACGACCTCGCCTTCGCGACGCGCCCCGTCACCCGGACGGCGCGGCTGACCCTGCCGGAGGGAGCCGAGGGCATCATCTTCGCGCCCTACGGCGACGGGTGGAGGCAGCTCCGGAAGATCTGCACCCTCGAGCTCCTCAGCGCCCGCCGCGTGCAGTCCTTCCGCGCCGTCCGCGAGGAGGAGGTCCGGCGCCTCCTCCTCGCCGTGGCGTCGCCGTCGCCGGAAGGGACGACGGCGACGGCGAGTGTCGTCAACCTGAGCAGGATGATATCGTCGTGCGTCGCCGACTCGTCGGTGCGCGCCATCATCGGAAGCGGCCGGTTCAAGGACAGGGAGACGTTCCTCCGGCTGATGGAGCGAGGGATCAAGCTGTTCTCCGGCCCGAGCTTGCCTGACCTCTTCCCGTCGTCGCGGCTGGCCATGCTCGTCAGCCGAGTTCCTGGCCGCATGAGGCGGCAGAGGAAGGAGATGATGGAGTTCATGGATACCATCATCGAGGAGCATCAGGCGGCGCGCGAGGCCTCCATGGAGCTCGAGAAAGAGGACCTGGTAGACGTACTCCTAAGAGTTCAGAGAGATGGTAGCCTTCAGTTTTCCCTCACCACGGACAACATCAAAGCTGCCATTGCTGTGAGTTACAATCTAAAACTTACATGGATGCTTTTATTTTTTTTCCGGGTTTTCTAATTAACATTCAATACTCCATCCGTTTCATATTATAAGACTTTTTAGCATTGCCCACATTCATATAGATGTTATATGTATAGATTCATTAACATCGATCTATATAAATATGGACAATGCTAGAAAGTCTTATAATATGAAATGGAGGAAGTAGTAAATAGGAGGAGAAATCTTACATATTTTGTTAAATCCGATTCACTAGAAGATTCATGCGCCACGCCTCCTCTAATTTTACTGACTCCAGCAACTCCAACGGTGAAAATTGGTGGTGGCCTGACCTGTTAGGGTTCGGGTATGTGGTCGAGGTAGGGGAGAGGGGAGAGTGGAGATAGGGGCATTCCCCACCTTAGATGGATGCTGGGGGAAGGGGGGAGGGAGGGCAGCGATATGATAGCGAGGCGGTGGCGGCATCGCCAAAGCCGTGGGGTCAACAATGGGCAGTGAGCAGGGTAGGCGATAGGGCAAATTAAGGTTGTGTTTAGTTCACACTGAAGTTTAAAAGTTTAGTTGAAATTGAAACGATGTGACTGAAAAGTTGTATATGTATGAAAGGTTTGATGTGATGGAAAGTTGGAAGTTTGAAAAAAAAACTTTGGAACTAAACAAGGCCTAAAAAGATAGCTGGATCATAAGATAGTGAGCGACCATAGCTTATCCGCCTGCGATAACCACTGGAGATAGGGAGAAGGTAGAGCATGGCAAGGGAGACGACAAAGATGTTAGGTGGTGGTAGACAAAGAAGCCGATGGAGGATGGTAGTATAGAGGGTTCGTCGGCGAGCCTCGCCGGTGTTGGAGGTGACGTTAGCGATGTGAATAGGCAGCAGTGAGAGGGTTGGGGGGGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGGGGCCTTTCCAGAGGGCCTCAGGCCCACCTAAGATTTCATATACAGCGTTCCTCCTGGATGGGGGAGAACGTTGCGTATATGGCTCAAAACTCTAAGTATTGAAGTAGCTTGCGGCCTGGTTTGGGTCACAAATAAACCGTAAACGTGCCTTAAGAATATAGCTTAGGGTCAGCCTCGGGCATGGCCATGTTCTGGGCCTCGGGCTCGCCCTAACCCTTGCAGTTTCTATGGTCCTCGGCAAGAGGGGCATGGCAACATGCAAGTCCTATATCTTAAGAAGATGAGCTAAGATCTGCCTCGGATGCGATCTAACTCTAGGCCCCGGGCTCGCCTTAGCCCATACAGGTCGCACATTTCTCGAGGAAGAAAAGCAACGAGGCTTGCCAAACATAAATGCGTGATCCCATGTGTGCTTTTGGCCTGGCCTTGCCTCGGGCCCTAGGCTCCCCCGAGATCTTGTATAGCTCACGTCCCCTGCTTAGAGGGGCGTGAGAAGGTACAAGACGCACAATCTCAAAATATTCTTCCATCGACGATGTCTTCAAGAAGCTCATCAAGAAATAATAAACATTCTTTAAGCGCGGCAGGGCGCGACCTCAAAAACTCTCAGGAAGTGGGGCATGCTCCCCACCATAAATGAAACAGTTTACAGGGGGATCCCCGCCAGTCTGAATTGAAAGGACGTGACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCACAAGACGAGATACGACAAGGTGCTTTATGGACAAGAAAGAATAACCGTAGGAGACCATAAGTAGTCTGCATTATCTTACACTTAGTCATCAAGGAGACGCTTCGGCTACACCCTCCAGCGCCACTACTTCTACCAAGGGAATGTCGTGAACCATGCCAAATATTAGGATTCGACGTGCCTAAAGGGGCTATGGTACTCATCAATGCATGGTCTATTGGTAGGGACCCAAGCAACTGGCATGCACCCAAAAAATTCATGCCAGAGAGGTTCGAGCAAAACAATATTGACTTTAAGAGAACAAGCTTTAAGTACATACCTTTTGGAGCAGGACGAAGAATCTGCCCAGGTATGACATTTGGGCTAGCAAACATCGAGCTTTTACTCGCTAGCCTTCTGTATCACTTTGACTGGGAGCTTCCACATGGGATGCAAGCAGGCGACCTCGATATGACTGAAACTCTGGCGGTTACCGCACGGCGAAAAGCAGACCTGTTGGTAGTTCCAGTTGTGCGTGTTCCCATCGTGGGTTAATTAGCCATCCACATTTCAGTTGACCGTTATTCATATCGATCAGTGTCTCGCTGTCCTTTGTCCAAATGTCAAATTAATCAGCCCCAATAATGATCATATATATGTTTTGTTTGACTTTTAGTTTGTTCGAGCAGCAGTAAGTAGATAGGCTAAGCTTTGAACAAACATTCAATGTCGTTCATGAAATGTATCTGCGAGTGATCTCCAATGGTATCTTGACAGTGATGTTTTCCAACCTGTTCAGACAATATTTTTCAACATGTTCAGACAATTTTTGTCCCTGCTTAGAAACTTATCAAGATCAGAATTCAGATTATTAGAACCAACTTACAACAATGAACAAACTGCAAATGATCTGAAGTCCAAAAAAACAACTATGCCTATGCTGAATTAGCAACGACTGAATGAGAACATGCAAAGCGAGAGCTCATCTGCTCACCTTCCTGGATACTCACACGTCGTATGCATCCATTCTCCTCCCGTTTCATCCCCCCCTCAAAAACTTCTTGTCAACATTTGGCAGAGCAGCAGTGATTTCACCGTGCCATGTTTTGGAATTTCGACATCCTGTCTCAGTGTCTCCACACAAAATGTTTTTATTTTTGTTTTTGTTTGTTTTGCAGAGGCCAAATCAGTATCAGCTCCACAACCTCAGGGCAGTAGGACACTCTGTTTGGCTGGGCTATAACTTTTCAGATAAACAGATAATTAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020806