BGIOSGA020812

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Revision as of 12:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020812| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020812, complete gene.| tag = OsI_238...")
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Gene Name

BGIOSGA020812

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020812, complete gene.

LocusTag

OsI_23841

Ensembl Transcript ID

BGIOSGA020812-TA

Ensembl Protein ID

BGIOSGA020812-PA

Length

2808

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27189491..27192298

Sequence Coding Region

27191976..27192298,27191747..27191772,27191610..27191640,27191386..27191473,27191179..27191279
,27190973..27191017,27190789..27190880,27190346..27190455,27190107..27190262
,27189491..27189730

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27189491..27192298 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27189491..27192298 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAACCTTCTACGGCGTCGGCAGCATTGCACTCGCCATGCACGAGGACGATGAGGAGGAAGGGTCTGGGAGGGTCTTTGGGTTCGCCGCCGGCGATCTTGTCCGGCCGGCGGTCGTCACCCAGCAGTTGTTCCCGATGACGGCGGCGGCGGCGGCGGTGGTGCCGGAGTCGACGGAGCAGCGCCACGTTGCCGCCGCCGCCGAGCAGTGGGCCCGGCCGCCATCGAGGAAGACGCGGCGGGGCCCCCGGTCCAGGAGCTCGCAGTATCGCGGTGTCACCTTCTACCGCCGCACCGGCCGCTGGGAGTCCCACATTTGGGATTGTGGGAAGCAGGTGTACTTGGGTGGATTCGATACGGCACAGGCTGCTGCAAGGGCTTATGACCAGGCTGCAATCAAGTTCCGTGGAGTGGAGGCAGACATCAACTTCACCCTGGATGACTACAAGGAGGACATAAAGAAGATGAACAACTTCAGCAAGGAGGAGTTCGTTCAGGTTCTCCGGCGACAGGGCGCCGGCTTCGTCAGGGGGAGCTCGCGGTTCAGAGGTGTCACCCTGCACAAGTACGTGTACCTTGGCCTGTATGACACGGAGATGGAGGCTGCCAAGGCTTATGACAAAGCGGCGATCAAGTGCTGTGGCAAGGAGGCTGTGACCAACTTTGACACCCAAGCGTACGAGGACGAGCTCAACCTGCAATCTTGGGATAGCGAGCTTGATCTTGAGCTCAGCCTCGGGTGCTCCGGTGGCGAACGGGCCGCCGGCGAGGTCCTCCACTCTGCACCAAGCAACCAGAGGACGAGCCTGACGTTCATGCTGCCGGAGGAGGAGGAGATGACCGCCTGCCACCGTCAGAGGAGCATCTGGGCTAGGCCTTCCTTGGCTCCGGCGATGCCGGACGGCGGCGCGGTCATCCGCCCTGATCAGCATCAGCATCACCCCAGTAGCCGGAACATGCTCCTGATGAGATTCCATGTTTGGTTCACCAATCTCCACAATTCCATTAGGGATGACCGTTATCTGATTGGGCGGAGGCTGCACAACTTTGGTGAGGACTCACTCCATTCAAGTGAACCTGGAACAACTACAGCGTCTGACGATGATGAACACGAGCAAGCACTCATTCCTCGCGATCAGGAAGGAGAGTTGGGGCTGAGGTTCAGGCGCCATATCATGCGTGGAAACCAACCGAGAATGGCTGCATAA</cdnaseq>

Protein Sequence

<aaseq>MAATFYGVGSIALAMHEDDEEEGSGRVFGFAAGDLVRPAVVTQQLFPMTAAAAAVVPESTEQRHVAAAAEQWARPPSRKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDQAAIKFRGVEADINFTLDDYKEDIKKMNNFSKEEFVQVLRRQGAGFVRGSSRFRGVTLHKYVYLGLYDTEMEAAKAYDKAAIKCCGKEAVTNFDTQAYEDELNLQSWDSELDLELSLGCSGGERAAGEVLHSAPSNQRTSLTFMLPEEEEMTACHRQRSIWARPSLAPAMPDGGAVIRPDQHQHHPSSRNMLLMRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDSLHSSEPGTTTASDDDEHEQALIPRDQEGELGLRFRRHIMRGNQPRMAA</aaseq>

Gene Sequence

<dnaseqindica>1..323#527..552#659..689#826..913#1020..1120#1282..1326#1419..1510#1844..1953#2037..2192#2569..2808#ATGGCGGCAACCTTCTACGGCGTCGGCAGCATTGCACTCGCCATGCACGAGGACGATGAGGAGGAAGGGTCTGGGAGGGTCTTTGGGTTCGCCGCCGGCGATCTTGTCCGGCCGGCGGTCGTCACCCAGCAGTTGTTCCCGATGACGGCGGCGGCGGCGGCGGTGGTGCCGGAGTCGACGGAGCAGCGCCACGTTGCCGCCGCCGCCGAGCAGTGGGCCCGGCCGCCATCGAGGAAGACGCGGCGGGGCCCCCGGTCCAGGAGCTCGCAGTATCGCGGTGTCACCTTCTACCGCCGCACCGGCCGCTGGGAGTCCCACATTTGGTCAGTTCATCTCTTGTCTTCTTCTTGTATTTATACATGTGCATATTTACGTACATTTGCTTTGCTTTCATATACTTGGCAATTGTATTCTGTAAAATGATTCTGACTGACCCATTTCAATCTCGCTTGCAATGTGCCAGCAATTTAAAAATTTTGCTTCTGTTATTTATCTTTGCTTGTGCTCTGTGTTTTTGAATGTGCAGGGATTGTGGGAAGCAGGTGTACTTGGGTGAGTGCTTTTGTCTTGTGGAAATGTCTCAGTTATATGGTCTGTCAATGCTTAATCAATTACGTGTCAGAATTTGTTCATGTGTGCATTGTGTGATTGTTTCTAGGTGGATTCGATACGGCACAGGCTGCTGCAAGGTAAAGCAGTTTATAACAGAGTTCTGCACATTGTCTTGTTTTTATCTGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAGGTGGGTTAGAAAAACTATCTGAATTGTTCGTCTTCTATGATCTGTTCCAGGGCTTATGACCAGGCTGCAATCAAGTTCCGTGGAGTGGAGGCAGACATCAACTTCACCCTGGATGACTACAAGGAGGACATAAAGAAGGTGATCAGATTAAGCCAGAGCAGAACAGATGCTACCCAAGAAAGAACTGTTCTGTTCACATGCATCTTTCTGAATTTTTTTTTTGTCATGGCATTTGCATTGGCAGATGAACAACTTCAGCAAGGAGGAGTTCGTTCAGGTTCTCCGGCGACAGGGCGCCGGCTTCGTCAGGGGGAGCTCGCGGTTCAGAGGTGTCACCCTGCACAAGTGCGGCAAATGGGAGGCCAGGATCGGCCAGCTCATGGGCAGAAGTAAATCAATCCACTCATTTCAGAAAAAAAAAAAGAAGATGAAATTTTGTTAGTTTTAAAAAGTGAATGATTCAATTTTGTTCTGATTCGGTTTCGTTTCCTCCCCGATCGTCGCAGGTACGTGTACCTTGGCCTGTATGACACGGAGATGGAGGCTGCCAAGTATGTGACATCATCGTCGCTGTCTGCTGGAGAATTGCTTGTGATCATCACCTTCATGATTTGTTCTTAATTTATTTTTACTATGATATCAGGGCTTATGACAAAGCGGCGATCAAGTGCTGTGGCAAGGAGGCTGTGACCAACTTTGACACCCAAGCGTACGAGGACGAGCTCAACCTGCAATGTAATCTATCTCCCTGTTTGTACTACAAAACGCTTTGATTTTCTTAGGTCAATTTTTTTTTATCAAATTTATAGAAAAACATAGTAACATTTCCAACACAAAACAAACATACTATCAGAATATACATTTAATAAAATTAGTTTAGTATTGTCAATGTTGTTAATTTATTTTATAAATTTGACTAAAATTAGAAAAAAAATTGAAAGATAAATATCTTGAGGAAGTATCTCAGTTCTCTGATGAATGATCACGACAAAAATAAGTTGCCTGACAATTGGCAACTGGTATGCGCCTCGCATTTTCCTGACCGCAGTAGTGTTTTTGTTGTTGCAGCTTGGGATAGCGAGCTTGATCTTGAGCTCAGCCTCGGGTGCTCCGGTGGCGAACGGGCCGCCGGCGAGGTCCTCCACTCTGCACCAAGCAACCAGAGGACGAGCCTGACGGTGAGACTCGCATGTCCATTGCTAGATGACACTGTCGGTGACATTGACGATGAGCTGTTCCATGCCCGGGAAAAAAAAAACAGTTCATGCTGCCGGAGGAGGAGGAGATGACCGCCTGCCACCGTCAGAGGAGCATCTGGGCTAGGCCTTCCTTGGCTCCGGCGATGCCGGACGGCGGCGCGGTCATCCGCCCTGATCAGCATCAGCATCACCCCAGTAGCCGGAACATGCTCCTGATGGTATGTATGCTTACTGACAGTGGTGTTCCTACATTGATCTTCCTGAGATCACGGGCCCTGAGTAGATTATCTTATTCTAACTAATGTGTATCGTGTTAATTAGAAGTAAAAATTGGATAATTAGTACTACCTCTCCATTTCATATTAGGCTTAACAGTATAAAAGTGGCTTATGACTTTAAAAAAAGTCAAATGAAAAAGTTATTTATTTGTTTAAGCTTAGACTTTTCAACTCATAAGCTGGCCTATAAGCTTAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTCAGCGGTCTACCGTTTCGCGTGGCTTGGCTGCTGATATTCAGCGCGCTGTTCTTCTGTGGCAAGAGATTCCATGTTTGGTTCACCAATCTCCACAATTCCATTAGGGATGACCGTTATCTGATTGGGCGGAGGCTGCACAACTTTGGTGAGGACTCACTCCATTCAAGTGAACCTGGAACAACTACAGCGTCTGACGATGATGAACACGAGCAAGCACTCATTCCTCGCGATCAGGAAGGAGAGTTGGGGCTGAGGTTCAGGCGCCATATCATGCGTGGAAACCAACCGAGAATGGCTGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020812