BGIOSGA020813

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Revision as of 12:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020813| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020813, complete gene.| tag = P0523F0...")
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Gene Name

BGIOSGA020813

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020813, complete gene.

LocusTag

P0523F01.34

Ensembl Transcript ID

BGIOSGA020813-TA

Ensembl Protein ID

BGIOSGA020813-PA

Length

3193

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27178841..27182033

Sequence Coding Region

27181711..27182033,27181482..27181507,27181345..27181375,27181120..27181207,27180867..27181012
,27180706..27180750,27180522..27180613,27180080..27180189,27179841..27179996
,27178841..27179140

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27178841..27182033 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27178841..27182033 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAACCTTCTACGGCGTCGGCAGCATTGCACTCGCCATGCACGAGGACGATGAGGAGGAAGGGTCTGGGAGGGTCTTTGGGTTCGCCGCCGGCGATCTTGTCCGGCCGGCGGTCGTCACCCAGCAGTTGTTCCCGATGACGGCGGCGGCGGCGGCGGTGGTGCCGGAGTCGACGGAGCAGCGCCACGTTGCCGCCGCCGCCGAGCAGTGGGCCCGGCCGCCATCGAGGAAGACGCGGCGGGGCCCCCGGTCCAGGAGCTCGCAGTATCGCGGTGTCACCTTCTACCGCCGGACCGGCCGCTGGGAGTCCCACATTTGGGATTGTGGGAAGCAGGTGTACTTGGGTGGATTCGATACGGCACAGGCTGCTGCAAGGGCTTATGACCAGGCTGCAATCAAGTTCCGTGGAGTGGAGGCAGACATCAACTTCACCCTGGATGACTACAAGGAGGACATAAAGAAGATGAACAACTTCAGCAAGGAGGAGTTCGTTCAGGTTCTCCGGCGACAGGGCGTCGGCTTCGTCAGGGGGAGCTCGCGGTTCAGAGGTGTCACCCTGCACAAGTGCGGCAAATGGGAGGCCAGGATCGGCCAGCTCATGGGCAAGAAGTACGTGTACCTTGGCCTGTATGACACGGAGATGGAGGCTGCCAAGGCTTATGACAAAGCGGCGATCAAGTGCTGTGGCAAGGAGGCTGTGACCAACTTTGACACCCAATCGTACGAGGACGAGCTCAACCTGCAATCTTGGGACAGCGAGCTTGATCTTGAGCTCAGCCTCGGGTGCTCCGGTGGCGAACGGGCCGCCGGCGAGGTCCTCCACTCTGCACCAAGCAACCAGAGGACGAGCCTGACGTTCATGCTGCCGGAGGAGGAGGAGATGACCGCCTGCCACCGTCAGAGGAGCATCTGGGCTAGGCCTTCCTTGGCTCCGGCGATGCCGGACGGCGGCGCGGTCATCTGTCCTGATCAGCATCAGCATCACCCCAGTAGCCGGAACATGCTCCTGATGAGCCAGGTCATCAGCAGTGGCGGAGGAGGAGGAAGCGGCAGGCAGGGCGCAGCAGAGCTACACATGCGTCCGCGCCATGGCTGGTCCAGCGGCGGCAATAATTGGGCGCCGCCGTACGCCGCCCGGCCCCGGCTGCCCGGCGCCGAAGACGACGACGACGACGACAGCGCCGCTGCAGCATCATCAGGATTCCCCATGGGGCAGGTGGCCACGGCGTCGTCCTCGTCCAGGCCCAGCAGCAGCAGCTGCAGCAGCAGGAGGAGCAGCACTGCCGCTGCCACTGCAACTACTGGCCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAATFYGVGSIALAMHEDDEEEGSGRVFGFAAGDLVRPAVVTQQLFPMTAAAAAVVPESTEQRHVAAAAEQWARPPSRKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDQAAIKFRGVEADINFTLDDYKEDIKKMNNFSKEEFVQVLRRQGVGFVRGSSRFRGVTLHKCGKWEARIGQLMGKKYVYLGLYDTEMEAAKAYDKAAIKCCGKEAVTNFDTQSYEDELNLQSWDSELDLELSLGCSGGERAAGEVLHSAPSNQRTSLTFMLPEEEEMTACHRQRSIWARPSLAPAMPDGGAVICPDQHQHHPSSRNMLLMSQVISSGGGGGSGRQGAAELHMRPRHGWSSGGNNWAPPYAARPRLPGAEDDDDDDSAAAASSGFPMGQVATASSSSRPSSSSCSSRRSSTAAATATTGR</aaseq>

Gene Sequence

<dnaseqindica>1..323#527..552#659..689#827..914#1022..1167#1284..1328#1421..1512#1845..1954#2038..2193#2894..3193#ATGGCGGCAACCTTCTACGGCGTCGGCAGCATTGCACTCGCCATGCACGAGGACGATGAGGAGGAAGGGTCTGGGAGGGTCTTTGGGTTCGCCGCCGGCGATCTTGTCCGGCCGGCGGTCGTCACCCAGCAGTTGTTCCCGATGACGGCGGCGGCGGCGGCGGTGGTGCCGGAGTCGACGGAGCAGCGCCACGTTGCCGCCGCCGCCGAGCAGTGGGCCCGGCCGCCATCGAGGAAGACGCGGCGGGGCCCCCGGTCCAGGAGCTCGCAGTATCGCGGTGTCACCTTCTACCGCCGGACCGGCCGCTGGGAGTCCCACATTTGGTCAGTTCGTCTCTTGTCTTCTTCTTGTATTTATACATGTGCATATTTACGTACATTTGCTTTGCCTTCATATACTTGGCAATTGTATTCTGTAAAATGATTCTGACTGACCCATTTCAATCTCGCTTGCAATGTGCCAGCAATTTAAAAATTTTGCTTCTGTTATTTATCTTTGCTTGTGCTCTGTGTTTTTGAATGTGCAGGGATTGTGGGAAGCAGGTGTACTTGGGTGAGTGCTTTTGTCTTGTGGAAATGTCTCAGTTATATGGTCTGTCAATGCTTAATCAATTACGTGTCAGAATTTGTTCATGTGTGCATTGTGTGATTGTTTCTAGGTGGATTCGATACGGCACAGGCTGCTGCAAGGTAAAGCAGTTTATAACAGAGTTCTGCACATTGTCTTGTTTTTATCTGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAGGTGGGTTAGAAAACTATCTGAATTGTTCGTCTTCTATGATCTGTTCCAGGGCTTATGACCAGGCTGCAATCAAGTTCCGTGGAGTGGAGGCAGACATCAACTTCACCCTGGATGACTACAAGGAGGACATAAAGAAGGTGATCAGATTAAGCCAGAGCAGAACAGATGCTACCCAAGAAAGAACTGTTCTGTTCACATGCATCTTTCTGAATTTTTTTTTTTGTCATGGCATTTGCATTGGCAGATGAACAACTTCAGCAAGGAGGAGTTCGTTCAGGTTCTCCGGCGACAGGGCGTCGGCTTCGTCAGGGGGAGCTCGCGGTTCAGAGGTGTCACCCTGCACAAGTGCGGCAAATGGGAGGCCAGGATCGGCCAGCTCATGGGCAAGAAGTAAATCAATCCACTCATTTCAGAAAAAAAAAAGAAGATGAAATTTTGTTAGTTTTAAAAAGTGAATGATTCAATTTTGTTCTGATTCGGTTTCGTTTCCTCCCCGATCGTCGCAGGTACGTGTACCTTGGCCTGTATGACACGGAGATGGAGGCTGCCAAGTATGTGACATCATCGTCGCTGTCTGCTGGAGTATTGCTTGTGATCATCACCTTGATGATTTGTTCTTAATTTATTTTTACTATGATATCAGGGCTTATGACAAAGCGGCGATCAAGTGCTGTGGCAAGGAGGCTGTGACCAACTTTGACACCCAATCGTACGAGGACGAGCTCAACCTGCAATGTAATCTGTCTCCCTGTTTGTATTACAAAACGCTTTGATTTTCTTGGGTCAATTTTTTTTATCAAATTTATAGAAAAACATAGTAACATTTCCAACACAAAACAAACATATTATCAGAATATACATTTAACAAAATTAGTTTAGTATTGTCAATGTTGTTAATTTTTTCTATAAATTTGACTAAAATTAGAAAAAAATTTGAAAGATAAATATCTTGAGGAAGTATCTCAGTTCTCTGATGAATGATCACGACAAAAATAAGTTGCCTGACAATTGGCAACTGGTATGCGCCTCGCATTTTCCTGACCGCAGTAGTGTTTTTGTTGTTGCAGCTTGGGACAGCGAGCTTGATCTTGAGCTCAGCCTCGGGTGCTCCGGTGGCGAACGGGCCGCCGGCGAGGTCCTCCACTCTGCACCAAGCAACCAGAGGACGAGCCTGACGGTGAGACTCGCATGTCCATTGCTAGATGACACTGTCGGTGACATTGACGATGAGCTGTTCCATGCCCGGGAAAAAAAAAACAGTTCATGCTGCCGGAGGAGGAGGAGATGACCGCCTGCCACCGTCAGAGGAGCATCTGGGCTAGGCCTTCCTTGGCTCCGGCGATGCCGGACGGCGGCGCGGTCATCTGTCCTGATCAGCATCAGCATCACCCCAGTAGCCGGAACATGCTCCTGATGGTATGTATGCTTACTGACAGTGGTGTTCCTACATTGATCTTCCTGAGATCACGGGCCCTGAGTAGATTATCTAATTCTAACTAATGTGTATCGTGTTAATTAGAAGTAAAAATTAGATAATTAGTACTACCTCTCCATTTCATATTAGGCTTAACAGTATAAAAGTGGCTTATGACTTTAAAAAAAGTCAAATGAAAAAGTTATTTATTTGTTTAAGCTTAGACTTTTCAACTCATAAGCTGGCCTATAAGCTTAAATAAAGAAGTCCTAAGTCGTTTGACTTTTTTTAAAATTAAATTTCTTAAGCTTTGATCAAGTTTATAGAAAAATACATCAATATTTTTAACATGAAACAAAGAAACTATCAAAATACATTTAGTTCTATAAGTGTTGCTGTATGTTTCTATATGTTCCTATAAACTTAGTTAAACTTTCTAAAAGATTGATTTAAAAAATACTAAAATAATTTATAATATGAAACGAAAGAAGTATATATAGAACTCCAGGCAGTTTTAATTCTGAGTTCGCAACTTGTCGCTGATCAGTTGATCACCTCACTAAAAGATGCATCATGCATGCTAAAAATTGCTAACCACGGGCTACAGGAGTACAAGGACGTGTCGTTTTGCTTTGATTATTTTTTGGCTTTGTGACGCAGTGATGAGTAAGTGTAACCCAACAGTATCTGACTGATGAACAGAGCCAGGTCATCAGCAGTGGCGGAGGAGGAGGAAGCGGCAGGCAGGGCGCAGCAGAGCTACACATGCGTCCGCGCCATGGCTGGTCCAGCGGCGGCAATAATTGGGCGCCGCCGTACGCCGCCCGGCCCCGGCTGCCCGGCGCCGAAGACGACGACGACGACGACAGCGCCGCTGCAGCATCATCAGGATTCCCCATGGGGCAGGTGGCCACGGCGTCGTCCTCGTCCAGGCCCAGCAGCAGCAGCTGCAGCAGCAGGAGGAGCAGCACTGCCGCTGCCACTGCAACTACTGGCCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020813

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020813&oldid=43338"