BGIOSGA020816

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Revision as of 12:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020816| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020816, complete gene.| tag = P0523F0...")
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Gene Name

BGIOSGA020816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020816, complete gene.

LocusTag

P0523F01.29

Ensembl Transcript ID

BGIOSGA020816-TA

Ensembl Protein ID

BGIOSGA020816-PA

Length

3587

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27160611..27164197

Sequence Coding Region

27163792..27164197,27162436..27162480,27162092..27162164,27161896..27161993,27161698..27161768
,27160611..27160736

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27160611..27164197 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27160611..27164197 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCATCTCGCCACCGTCGTGCTCCTGCTCGTCGCGGCCGCGCGCCAAGCTCCCCTCGCCGCCGGCGACCACTCGGCGAACCCTCGCCTCCCCACCTGCGCAGCCGCACCGGATGTGGCTGCGCCGCAGGAGCACGGCGACGGCGGCGGCGTCGTCGGAGGGAGGCGGATCCTGGACATCACGCACGCGGTGCGGGCGGAGCTCCCGGTTCTGGGTTCGTGCGACGGGGTGGGCGCGCTGGTGCGGCTGAAGAAGTCCATGGCGAACGGCTCGCGCTCCAACCTCTCGGAGCTCCGGATGAGCGTGCACACGGGCACCCACGTCGACGCCCCCGGCCACATGTGGCAGCCGCACTTCGACGCCGGCCTCGACGTCGACACCCTCGACCTCGGCCTCCTCAATGGTCCTGCATTGCTGGTTGATGTCCCGAGACACTCAAACGTAACTGCTGAAGTAATGGAGTCCCTGAACATCCCAAGAGGAGTTCGTCGAGTTCTTTTCAGAAGAATGAACACTGACAAGAGACTGATGTGGCAAAAGGAGAGTGATCTGAGTTTTGTTGGATTTACAGAGGATGGTGCGCAATGGTTGGTTGGTTACACTGATATTAAGCTAGTCGGGGTGGACTATCTATCAGTTGCTTCGTATGAACACATGATTCCTGCACATGTAGTGTTTTTGAAAAGTAAGGAAATTGTAATTGTCGAAGCTCTGAAGTTAGATGATGTGGAACCTGGCATGTACATGTTACATTGCTTACCTCTAAGGCTGGCTGGAGCTGAGGGTTCACCCGTTAGGTGCATCCTTATAAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAHLATVVLLLVAAARQAPLAAGDHSANPRLPTCAAAPDVAAPQEHGDGGGVVGGRRILDITHAVRAELPVLGSCDGVGALVRLKKSMANGSRSNLSELRMSVHTGTHVDAPGHMWQPHFDAGLDVDTLDLGLLNGPALLVDVPRHSNVTAEVMESLNIPRGVRRVLFRRMNTDKRLMWQKESDLSFVGFTEDGAQWLVGYTDIKLVGVDYLSVASYEHMIPAHVVFLKSKEIVIVEALKLDDVEPGMYMLHCLPLRLAGAEGSPVRCILIK</aaseq>

Gene Sequence

<dnaseqindica>1..406#1718..1762#2034..2106#2205..2302#2430..2500#3462..3587#ATGGCTCATCTCGCCACCGTCGTGCTCCTGCTCGTCGCGGCCGCGCGCCAAGCTCCCCTCGCCGCCGGCGACCACTCGGCGAACCCTCGCCTCCCCACCTGCGCAGCCGCACCGGATGTGGCTGCGCCGCAGGAGCACGGCGACGGCGGCGGCGTCGTCGGAGGGAGGCGGATCCTGGACATCACGCACGCGGTGCGGGCGGAGCTCCCGGTTCTGGGTTCGTGCGACGGGGTGGGCGCGCTGGTGCGGCTGAAGAAGTCCATGGCGAACGGCTCGCGCTCCAACCTCTCGGAGCTCCGGATGAGCGTGCACACGGGCACCCACGTCGACGCCCCCGGCCACATGTGGCAGCCGCACTTCGACGCCGGCCTCGACGTCGACACCCTCGACCTCGGCCTCCTCAATGGTATCGATCGATTATCGAAGCTTACTTTTGGCGTGGTTTTCTAATTCTCCTTTGCACGAGGCCACGCGCTCGAATTTTGTTGGTCCTTCTGATGAACTGATATTCAAACTGAACTCTTTTAGAATCCACGGAGAAATTGGATATTCTGCCACTGCGGGCTTCGCCACAATGCCATTCCGCGGAATGGCGTGTTAAAATGCGAGTCCAACCGATGATAAACCGTTGTTTCGCTATATTCACCATTTCACAAGATTTTCACCATTTTCCACACTTCAACTGACCAAAATACCCCTCTCTCCGGTGAACATGTGGGAGTTGTGGGCGAGGAGAAGGGGAAGGGGCGACGTTGTTCCGGACGCCGTCGCCGGCGAGAGAAGGACGAGGCGGTGACCGTCGCCGGTGACCGTCCCAGGGGCGCGGTGGGCGCGCTGCTTCGCGGCGGAAGGGAGGCGGAAGAAGCCTGCGGCTCGCGTAGCTAGCGACGAACCACGCCGCGAGCAACGGGAACATGGCGCCAGCGGCGAAGGACAGCGCCGACGTGGCCGCGGCCTGGGAGGATGGCGACACCGCCGCCGCTTGCAGTCGCAAGCCAGCCGACACCGGAGTAGGGCCGCGCGCTTGATTTCGGCCAGCTAGACATCGAGCTGCGCGTGGCCGGCGACGAGGCCGGTTAGCCCGGACAGGAGGACGGCTTGCCGATGGCCAGGCGACGGCGACGAGGCCGGCCAGCCCGGACAGGAGGACGGCACGCTCGTCGGCGGGGCACGCCGCGCCGATGCCGAGCATGAGCGACGCAGTGGAGACGAGGTCGTCGCTGGCACCTAGCACCGCGGCGCGCAGCCACTGGAAGTGCATGCCGCCGCCGTCGTGGACCGCCGCCGTCGTGGGTGGCTTCCTCTTCCTCCTTGGCCTCTGCCACGGTTAGCTCGGTGTCGCCATTGGCAACCACCACTCAGATCGAAGGGCATTTTGGGTAACCCGGGTGAAAAATTAGGTGAAAATGGAGTGAAATGGTCCAAATGGCAAAATAAATGTAAGCCCAGTCTTGGCAGTGGCATTTTAACGACGCCATTCCGTATAATGGCATTGTGGCGAATCCCACTCTTGATAGTGGCGTAATGTCCAATTTCTCGAATCCATGTGAGTAGTCATGATTATGAGATATGTGAGGCGCATATTCATCTATACTTTTGGTAGTTTTTGTTGTCAATTTTTTAATTATGGTGATCAGGTGAAATGCGTGTGATTTTGATTTTAAAGTTAATTATTCCTATAAAGTTGTAATAATCAATTTCTGATTGTAATGGACAGGTCCTGCATTGCTGGTTGATGTCCCGAGACACTCAAACGTAACTGGTACACAATGTTGTAGTTTCTGAAATTTGTTGAGCACTTTATCCATTAAATGTTGGACTAAATTATCTTCCATCCATGTCAACATAAATCTAAATTTTTATTCCGGGGCTGTAGAGATAAGTGACCTGATGCATGGTTCACATCATTATTCAGTTATCTCTAACTCAGCCCAATTTAGCACTTTGGTTCTATACTTCTTTAAGAAGCTTAAGTTAGCATGTCTGTTCTCATGTGTTTGGGTTTTTAGTACTAAGAAAATTGCGTTATGCAGCTGAAGTAATGGAGTCCCTGAACATCCCAAGAGGAGTTCGTCGAGTTCTTTTCAGAAGAATGAACACTGACAAGTAATTAATAAATAGCCGACTTAGGTGTACTGCATGATTTTTATCATTTAAGCTCCATGCGATGAAAGCTTAATAGATAGGGAATTTTTAATTTCCAGGAGACTGATGTGGCAAAAGGAGAGTGATCTGAGTTTTGTTGGATTTACAGAGGATGGTGCGCAATGGTTGGTTGGTTACACTGATATTAAGCTAGTCGGTAAGTAATTGCTATGCTGACATCCTGTCCTATGGAACATCGGTCAGTTGGTGTATATGGTTCTGATAGGTTGATGTGTTTACCTTTTACAACCTGGACTTAACATGTTTGCTTGATAATCCTGTAGGGGTGGACTATCTATCAGTTGCTTCGTATGAACACATGATTCCTGCACATGTAGTGTTTTTGAAAAGTAAGGTAAGAAACTTGACTTCCTGTATGAAATATTGAAATCTATGGATCAGCTTTAGTACTCTCACCACCTGTAATAAGATCTATTAGTCTCTTACTGTTGAATTTGTTGCCTGTACTGCACAAATTTTCTGTATCAGGCATTGTTGATCGAATTACTCTGAGAATGCTGATGCTAGATCCAAAATAGTACTTCCAAAACTAATCAGCATATTTCTCCTTTCTATTTATTGAACTACAGCTAGCTCCCCCTCCTTTTCTTTAAATCTTTGGAGTACAATTAGGAGGCATAGAAATTCAATAATGGTGTGTTCCTGGGTCCTGAGCTTCAAGATCTATCAGGGGACATTTACGAAACAAAAATAGCTGCACAAATTACAGGGTCTCATACTCCAATGGTGATACCAAGAGGGCAAGAAGTTCCTTGACACTAGTGGTGGATTTAGTCTTGACTTATATGTTGAATACTTTTTTTTTCTTTTGCCAATTTAGCTTTCGAAATGACCATCTAACACAAGATGTGTTACTAAATATGCATTGTCAAAGATCCATGCTCAATCTCTTGTACACCAATGAAAAGAAATTCAGATAATCAGAATTAGAGGACTTTCTTGGACAAAGCAACTCAATGATTCATCATTTGTATACTCATTGGTTGACAAAAGAAAAGGATTTGTGTTTTATAAAGAAGCATCTTTTGGCTAGTGCTGGCGGGGGCTTTGGGCTTTATATTGGAAAGGCGATGGTAATAATAGAGTTAAACTGACAAGGTTGGAGATGATGATTTTACGCACTTTACTCTTCACTTTTTGTAATGTGTACTTCCCTTTTGTCTAGTGCTCCTCTGAAGAACATTACACTATGTGTGTCGGTGATTCGAGAATGGTGCATGCTGCTTTTTATGTCAGTCAGATATTTCTTTACTAGTTTATGTGCCACTTATTTATTTGGCTATTTTTTCATGAAGGAAATTGTAATTGTCGAAGCTCTGAAGTTAGATGATGTGGAACCTGGCATGTACATGTTACATTGCTTACCTCTAAGGCTGGCTGGAGCTGAGGGTTCACCCGTTAGGTGCATCCTTATAAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020816