BGIOSGA020827

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Revision as of 12:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020827| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020827, complete gene.| tag = OsI_238...")
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Gene Name

BGIOSGA020827

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020827, complete gene.

LocusTag

OsI_23810

Ensembl Transcript ID

BGIOSGA020827-TA

Ensembl Protein ID

BGIOSGA020827-PA

Length

2572

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26922909..26925480

Sequence Coding Region

26925402..26925480,26924026..26925299,26922909..26923808

Genome Context

<gbrowseImage1> name=IndicaChromosome06:26922909..26925480 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:26922909..26925480 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTTCCTGGCGCCCGGACGCGGCCGCCTCCTTCGGGTGCTCCCCACAAGGCGGCACCGTCTTCCGCCTCCCCAAGGGTCAGGAGGCTACGCGGCGTGCTTCCGGCGGTGCAAGGCGCACTTCTTGCTCGATGGAGTCGAGGATGCGGTGGAGGGAGCCGCCGAGCCGCAGCAGCCACCGGTGTCACTTGCGAAGAGCCTGGCCTCTCTCACCGAGGAGTCGGCCGTGGCCGCTCAGAGGCAGAGGAAGCCCCTGCTGCGGATGGAGCGGAAGAGGCTGGCTGAGCTCAGGATCAAGAAGAGGGTCAAGGCGCAGTATTTGAACGGCAAGTTTCATGATCTCATGGCTAACGTGGTGGCTAGCACTGATACTTTGGAGGATGCTTATGACATTGTTCGGCTCAATTCAAATATTGACATGTCATCGGTGAGGGATGATGTTTGCTTTGCTACATTGGCGGAGCTGCTCAGGACTGGTGAGTTCGATGTCAGAGCGAATGTTTATGCGGTGGTTGCAAAGAGGCGAGATGGAGGGAGGCTTGTTCTCCCACGGTTGAACTTGAGAATTATTCAGGAAGCAGTAAGGGTGGTGCTTGAGGTTGTTTACAGACCCCATTTCTCAAAGATATCACATGGCTGTCGGAGCGGCCGAGGGCATCAGTCGGCTCTGAGGTTCATTTCCAATGAAATTGGGATTCCAGATTGGTGCTTTACTATCCCCATGCATAAAGAAATAGATAGAAATGTTCTCTCTAAGATTATCTGTCTAATACAGGAAAAGATCGATGACAATCAGTTAGTTACATTCATGCAACACATGTTTGATGCAGAGGTGATCAATTTGGTATTTGGAGGATTTCCTAAAGGCCATGGGCTTCCTCAAGAAGGAGTACTTGCGCCAATCCTAATGAACATATACCTCGACAGTTTTGACCACGAGGTGTTCAGGATTTGCATGAGGCATGAAGGCCTTGGTTCAGAGGCAGCAGATGTTTCAGACAACCAGGAGTCAAATTTGCGCCACTGGTTTCGAAGTCAAATTTCAGGCTTGAAGGATAGGGAGGAAAACAGTGACAATCAAACAGACTATCCACTAAAAACAAAACTATATGCTTGTAGATACATGGACGAGATCTTTGTTGCAGTTGTTGGATCCAGAGATATTGCAGAAGATATAAAATCGGAAATGATTACTTACTTAAGAAAAACACTATTCTTGGAAGTTGATGACAGGTTGTATCTTATGCCGGTCAGAAGTAATTCCCGGGGCTTACAGTTTGCTGGCTCTATGGTAAGAGTTACAACAAAGGAAAGTGCTGCACTGAAAGCTGTGCATAAGCTGAAGGAAAAGGATATCAATGCTAAACGCGAAGCTGATGAGAGCATACTCCTGTCAAAATACATTGCTGAACCATCACTTCCGCAGGACCTCAAAGATGCGTTCAACAACTTTCAGAAGCAAGCCAAAGATTACATCTCATCAGAAACTGCTGCCACAGAAGCATTATTGTCCAGCTTAAAGAATAAAGAATCAGCTATTACCTGCACTGATGGTGCTGTCATTAAGATCCATGCTCCTATTAGCTATATCCATAAGTGCCTTAATCGTTATGGTCTAATTAATCTTGAAGGTTTCCCTAAGCACGTTTCAGCCCTTGTTTTGCAAGACGATGAGCTAATCATAAGTTGGTTTGCAGGAATAATTCAACGTTGGATGAGATGGTTCTCAGAGGTTGACAATTTTAAAGAACTTAAGCTTATGTTGGTTGAATGTGTCAGGAAATCCTGCATCAGGACATTATCGGCAAAGTACCGAATGTATGAGAAAATAACAGAAAAGCGATTTGAACTTGATGATTATGGTATTCCAATGGCCGAGGACTTTGAGGCAATAATGGCACCTTTAGAATCTAGTTCGTCGGTTTGCACTGATGAAGCTCTGATGTATGGCATTTCTAGTAGTGGATTGTTTGTGCTCACCCTCTCAAGAGTTAGAGTTCCTTCTCGGCAATTTGACTGTTTTGTCATGGGATGCCAATCTGCATCGCTGAGTATGTATGTTCTTCATGTCAAAGAGAGACAGCGGTTTCCAGGATTTAGGACAGGTTTCTCATCATCAATTCATGGCAGTTTGGATGGTAGACGGGTTGGGTTGTGCACTCAACATGTTAAGGATTTATATCTAGGACACATCTCCCTTCAGTCAGTTGATTTTGGTGTGCTGATAGATGACTCTAATAAAATACCTTAA</cdnaseq>

Protein Sequence

<aaseq>MSFLAPGRGRLLRVLPTRRHRLPPPQGSGGYAACFRRCKAHFLLDGVEDAVEGAAEPQQPPVSLAKSLASLTEESAVAAQRQRKPLLRMERKRLAELRIKKRVKAQYLNGKFHDLMANVVASTDTLEDAYDIVRLNSNIDMSSVRDDVCFATLAELLRTGEFDVRANVYAVVAKRRDGGRLVLPRLNLRIIQEAVRVVLEVVYRPHFSKISHGCRSGRGHQSALRFISNEIGIPDWCFTIPMHKEIDRNVLSKIICLIQEKIDDNQLVTFMQHMFDAEVINLVFGGFPKGHGLPQEGVLAPILMNIYLDSFDHEVFRICMRHEGLGSEAADVSDNQESNLRHWFRSQISGLKDREENSDNQTDYPLKTKLYACRYMDEIFVAVVGSRDIAEDIKSEMITYLRKTLFLEVDDRLYLMPVRSNSRGLQFAGSMVRVTTKESAALKAVHKLKEKDINAKREADESILLSKYIAEPSLPQDLKDAFNNFQKQAKDYISSETAATEALLSSLKNKESAITCTDGAVIKIHAPISYIHKCLNRYGLINLEGFPKHVSALVLQDDELIISWFAGIIQRWMRWFSEVDNFKELKLMLVECVRKSCIRTLSAKYRMYEKITEKRFELDDYGIPMAEDFEAIMAPLESSSSVCTDEALMYGISSSGLFVLTLSRVRVPSRQFDCFVMGCQSASLSMYVLHVKERQRFPGFRTGFSSSIHGSLDGRRVGLCTQHVKDLYLGHISLQSVDFGVLIDDSNKIP</aaseq>

Gene Sequence

<dnaseqindica>1..79#182..1455#1673..2572#ATGTCCTTCCTGGCGCCCGGACGCGGCCGCCTCCTTCGGGTGCTCCCCACAAGGCGGCACCGTCTTCCGCCTCCCCAAGGTACACCACCTTCTCTCACCAACGCGTCGGTTCCCCGTCACGGCCTCACGGGGTAAGAATGCCACTAACGATGGTGTTCTGTTGTTGTTTCTGTTCCTGGAGGGTCAGGAGGCTACGCGGCGTGCTTCCGGCGGTGCAAGGCGCACTTCTTGCTCGATGGAGTCGAGGATGCGGTGGAGGGAGCCGCCGAGCCGCAGCAGCCACCGGTGTCACTTGCGAAGAGCCTGGCCTCTCTCACCGAGGAGTCGGCCGTGGCCGCTCAGAGGCAGAGGAAGCCCCTGCTGCGGATGGAGCGGAAGAGGCTGGCTGAGCTCAGGATCAAGAAGAGGGTCAAGGCGCAGTATTTGAACGGCAAGTTTCATGATCTCATGGCTAACGTGGTGGCTAGCACTGATACTTTGGAGGATGCTTATGACATTGTTCGGCTCAATTCAAATATTGACATGTCATCGGTGAGGGATGATGTTTGCTTTGCTACATTGGCGGAGCTGCTCAGGACTGGTGAGTTCGATGTCAGAGCGAATGTTTATGCGGTGGTTGCAAAGAGGCGAGATGGAGGGAGGCTTGTTCTCCCACGGTTGAACTTGAGAATTATTCAGGAAGCAGTAAGGGTGGTGCTTGAGGTTGTTTACAGACCCCATTTCTCAAAGATATCACATGGCTGTCGGAGCGGCCGAGGGCATCAGTCGGCTCTGAGGTTCATTTCCAATGAAATTGGGATTCCAGATTGGTGCTTTACTATCCCCATGCATAAAGAAATAGATAGAAATGTTCTCTCTAAGATTATCTGTCTAATACAGGAAAAGATCGATGACAATCAGTTAGTTACATTCATGCAACACATGTTTGATGCAGAGGTGATCAATTTGGTATTTGGAGGATTTCCTAAAGGCCATGGGCTTCCTCAAGAAGGAGTACTTGCGCCAATCCTAATGAACATATACCTCGACAGTTTTGACCACGAGGTGTTCAGGATTTGCATGAGGCATGAAGGCCTTGGTTCAGAGGCAGCAGATGTTTCAGACAACCAGGAGTCAAATTTGCGCCACTGGTTTCGAAGTCAAATTTCAGGCTTGAAGGATAGGGAGGAAAACAGTGACAATCAAACAGACTATCCACTAAAAACAAAACTATATGCTTGTAGATACATGGACGAGATCTTTGTTGCAGTTGTTGGATCCAGAGATATTGCAGAAGATATAAAATCGGAAATGATTACTTACTTAAGAAAAACACTATTCTTGGAAGTTGATGACAGGTTGTATCTTATGCCGGTCAGAAGTAATTCCCGGGGCTTACAGTTTGCTGGCTCTATGGTAAGAGTTACAACAAAGGAAAGTGCTGCACTGAAAGCTGTGCATAAGCTGAAGGAAAAGGTTCATTTATTTGCTTCTCAGAAGCACAGAGATATGGGATGCTATGAATCTTAGGTTAGGAAAGAAGTGGTTGGCATATGGTTTGAGAAGAGTAAAGGAGTCTGAGATCAAGTCACTTGGTCTTAGCACGCCTTTGTTGGATCACATTGCACAGTTTAGGAAAGACGGTATGAAGACAGATCATTGGTTCAAAACTTTACTCAAGGTATGGATGCAGGATATCAATGCTAAACGCGAAGCTGATGAGAGCATACTCCTGTCAAAATACATTGCTGAACCATCACTTCCGCAGGACCTCAAAGATGCGTTCAACAACTTTCAGAAGCAAGCCAAAGATTACATCTCATCAGAAACTGCTGCCACAGAAGCATTATTGTCCAGCTTAAAGAATAAAGAATCAGCTATTACCTGCACTGATGGTGCTGTCATTAAGATCCATGCTCCTATTAGCTATATCCATAAGTGCCTTAATCGTTATGGTCTAATTAATCTTGAAGGTTTCCCTAAGCACGTTTCAGCCCTTGTTTTGCAAGACGATGAGCTAATCATAAGTTGGTTTGCAGGAATAATTCAACGTTGGATGAGATGGTTCTCAGAGGTTGACAATTTTAAAGAACTTAAGCTTATGTTGGTTGAATGTGTCAGGAAATCCTGCATCAGGACATTATCGGCAAAGTACCGAATGTATGAGAAAATAACAGAAAAGCGATTTGAACTTGATGATTATGGTATTCCAATGGCCGAGGACTTTGAGGCAATAATGGCACCTTTAGAATCTAGTTCGTCGGTTTGCACTGATGAAGCTCTGATGTATGGCATTTCTAGTAGTGGATTGTTTGTGCTCACCCTCTCAAGAGTTAGAGTTCCTTCTCGGCAATTTGACTGTTTTGTCATGGGATGCCAATCTGCATCGCTGAGTATGTATGTTCTTCATGTCAAAGAGAGACAGCGGTTTCCAGGATTTAGGACAGGTTTCTCATCATCAATTCATGGCAGTTTGGATGGTAGACGGGTTGGGTTGTGCACTCAACATGTTAAGGATTTATATCTAGGACACATCTCCCTTCAGTCAGTTGATTTTGGTGTGCTGATAGATGACTCTAATAAAATACCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020827

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020827&oldid=43352"