BGIOSGA020832

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Revision as of 12:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020832| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020832, complete gene.| tag = P0505A0...")
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Gene Name

BGIOSGA020832

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020832, complete gene.

LocusTag

P0505A04.10-2

Ensembl Transcript ID

BGIOSGA020832-TA

Ensembl Protein ID

BGIOSGA020832-PA

Length

3666

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26807424..26811089

Sequence Coding Region

26811047..26811089,26809648..26809963,26808106..26808860,26807901..26807999,26807424..26807674

Genome Context

<gbrowseImage1> name=IndicaChromosome06:26807424..26811089 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:26807424..26811089 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCACCGCCTCCGTCCGACCTCCCCTGCTCCGACAAGCAGCAGGTTCAGAAAAAGCCTCACTCCTTTGCAAACCAAAGCAGAGAGCTTCTGTCAGAAGAAGAAGCTTCACTGCCAGGGCCAGCTCGAATCCTGTGAGCATCCCGAAGCAATGGTACAACCTCGTCGCCGACCTGCCGGTGAAGCCGCCGCCGCCGCTGCACCCGCAGACGCACCAGCCACTGGACCCTAGTGACCTGTCCCCTCTCTTCCCCGACGAGCTGATCAGGCAGGAGGTGACCGAGGAGCGGTTCATCGACATCCCGGAGGAGGTCGCCGAGGTTTACAAGCTCTGGCGCCCGACGCCGCTGATCAGGGCGAGGAGGCTGGAGAAGCTGCTGGGCACGCCGGCGAAGATCTACTACAAGTACGAGGGGACGAGCCCGGCGGGGTCGCACAAGCCGAACACGGCGGTGCCGCAGGCGTGGTACAACGCCGCCGCCGGGGTGAGGAGCGTGGTGACGGAGACCGGCGCCGGGCAGTGGGGCAGCGCGCTGTCGTTCGCGAGCAGCCTGTTCGGGCTCACCTGCGAGGTGTGGCAGGTGCGCGCGTCGTACGACCAGAAGCCGTACCGGCGGCTGATGATGGAGACGTGGGGCGCCACGGTGCACCCGTCGCCGTCGGCGGCGACGGAGTCGGGGAGGAGGATCCTGGAACGCGACCCGGCGAGCCCGGGCAGCCTCGGGATCGCCATCTCGGAGGCGGTGGAGGTGGCGGCGAGGGACGCCGACACCAAGTACTGCCTCGGCAGCGTGCTCAACCACGTGCTGCTCCACCAGACGGTGATTGGGGAGGAGTGCCTGGAGCAGCTGGCGGCCGCCGGCGACGTCCCCGACGTCGTCATCGGCTGCACTGGCGGCGGGTCCAACTTCGGCGGGCTGGTGTTCCCGTTCATGCGCGAGAAGCTCGCCGGCAGGATGAGCCCGGCGTTCAAGGCCGTCGAGCCGGCGGCGTGCCCGACGCTCACCAAGGGCGTCTACGCCTACGACTTCGGCGACACCGCCGGCCTCACGCCGCTCATGAAGATGCACACCCTCGGCCATGGATTCGTCCCCGACCCCATCCATGCAGGAGGGCTTCGCTACCATGGAATGGCGCCACTAATCTCCCATGTGTATGAGCTTGGATTCATGGAAGCCATTGCCATCCAACAAACCGAATGCTTCGATGCTGCGTTGAAATTTGCGCGGACGGAGGGGATCATCCCGGCGCCGGAGCCGACGCACGCGATCGCGGCGGCGATCAGGGAGGCGATGGAGTGCAAGAGGACGGGGGAGAAGAAGGTGATCCTGATGGCCATGTGCGGGCACGGCCACTTCGACCTGGCGTCCTACGAGAAGTACCTGAGGGGCGACATGGTCGACCTCTCCCACTCCGACGAGAAGCTGCAGGAAGCCCTTGCCGCCGTCCCCAAAATCTGA</cdnaseq>

Protein Sequence

<aaseq>MATTASVRPPLLRQAAGSEKASLLCKPKQRASVRRRSFTARASSNPVSIPKQWYNLVADLPVKPPPPLHPQTHQPLDPSDLSPLFPDELIRQEVTEERFIDIPEEVAEVYKLWRPTPLIRARRLEKLLGTPAKIYYKYEGTSPAGSHKPNTAVPQAWYNAAAGVRSVVTETGAGQWGSALSFASSLFGLTCEVWQVRASYDQKPYRRLMMETWGATVHPSPSAATESGRRILERDPASPGSLGIAISEAVEVAARDADTKYCLGSVLNHVLLHQTVIGEECLEQLAAAGDVPDVVIGCTGGGSNFGGLVFPFMREKLAGRMSPAFKAVEPAACPTLTKGVYAYDFGDTAGLTPLMKMHTLGHGFVPDPIHAGGLRYHGMAPLISHVYELGFMEAIAIQQTECFDAALKFARTEGIIPAPEPTHAIAAAIREAMECKRTGEKKVILMAMCGHGHFDLASYEKYLRGDMVDLSHSDEKLQEALAAVPKI</aaseq>

Gene Sequence

<dnaseqindica>1..43#1127..1442#2230..2984#3091..3189#3416..3666#ATGGCCACCACCGCCTCCGTCCGACCTCCCCTGCTCCGACAAGGTGGATCCCTGCATCTCATCGTGCCCTCTTGTGCTATTGGGTTTATAGTACTTTCTTGGATTCTTTAGATTGGGTTGATTTGATTGATGGCCCAACATAGATATCGTCTTGGAGGAGATGGGAGCAACGGGTGTGTTGTGTTTTGCTGCTGTTCTTGGATTGGATTGGATTGGTTTATGTTTCTTGTTACTCCTGTAGAGCAACCCAAGAACTCAACCCATTACTTTATTTATTTTACACTTGTGTTTCTGTGCACTTGGATCTCAATGAATTTATTATGTTATCAGTTGTTAGTTGTGATCCTGTTCTGTCTGCTATCCGGCCCAAACCCATCAACAGTAGTATGACCTCCTAGCATAAAATTAAATTAAATTAATCAGTAGCATGCTCTCCTTAGAGAAAAACAAAGTGGGATAAAGTAAACTAACCAGTAGAATACCCCAGTTGGGCACTTCTGATTGATTTTCATTCCTTCTAAATGTGCAATAGTTGATTACAGATGAACATAATAGATGATGATGATGTTGGTACAGATTATGTAAGTTCAGTATTTTCTCTCCCTTCTAACAGTCCTGCAGAATTGGGAATCTTAAACCAAATTGCAGTACTGTGGGGGCAAGGCAAAACATAAATGTTTCAGTTAGGAGTAGACATCATCTTGGTAGTACATGTCCAAATTAAATATTAATCAGTGTACCACACTCCTAGCACTCAGTTTCTATGCAACAATTTCAACACTTTGAGATATCAGATATGTGGCTGAAAAATGCTTATCTAGATCTTATGGCAATTAATAGTAGTATATCTTTTTTTTTCGGGCCTGTTCACTTTAATGCCAAAAAAACCTTATCAAATTTTGGCATTGCTAAAATTTTAGTATAGTTGCCAAAATTTTGGCAGGATTTTTTATATAGTTATCAAAATTTAGCAGCAAATTAAATGTAGCCACTTTTTTAGCAACCTTACTAAAAATAAGGTTGAAAATGGCATCAAAGTGAACAGGCCTTCAATCTAATTTCTGAATTCTGGAGCTGCAAATCTGCACACACACTAACCTGATGAACACTACTACCTGTATTGCAGCAGCAGGTTCAGAAAAAGCCTCACTCCTTTGCAAACCAAAGCAGAGAGCTTCTGTCAGAAGAAGAAGCTTCACTGCCAGGGCCAGCTCGAATCCTGTGAGCATCCCGAAGCAATGGTACAACCTCGTCGCCGACCTGCCGGTGAAGCCGCCGCCGCCGCTGCACCCGCAGACGCACCAGCCACTGGACCCTAGTGACCTGTCCCCTCTCTTCCCCGACGAGCTGATCAGGCAGGAGGTGACCGAGGAGCGGTTCATCGACATCCCGGAGGAGGTCGCCGAGGTTTACAAGCTCTGGCGCCCGACGCCGCTGATCAGGTAGAACACTAACAACTCCATCGGTAGGCCAAATAAACCAAAGTTAAAACCAAAATGTGAATTTTCAAGCTTAATTTTGAAACTGATTTTGAAATATTTTTAACGTAGTTTTTATTGGATATTGGCTTTTAAATCATTAAGGCTGTGTTTGAGAAAGGGGAGATAGAGAAGATTGGGAAGATACGCAAAACGAGGTGAGCTATTAGTGTATGATTAATTAAATATTAATTATTTCAAATTTTAAAAATGGACTAATATGATTTTTTAAAGCAACTTTCCTATAGAAAATTTTTACAAAAAACACACTATTTAATAGTTTGGGAAGCGTGCACGCGAAAAACGATGTGCATTCTATCTCCAATCTCCCAGAACGAACGCTGCCTAAGAATACACATACAAAAGGTTCACCTATAAATCATTATCTCCATCTCATAATTATTGTATTTATTAGATTCAGATTTGTCCCAAAATAGTTATCACAATGAAGTACTGGTTGTCTTGTCAATCATATTTCATTAAGTTTTTTTTCCTATTCTACTTTTAACCACCCTTCCAGACTTCCACTCTTACCTATACGGTCACTATAGTTTCTTTTTCCTCAAACATTAATTTAATTTATGTTAAACAATTTGAGGCAGTAATTTTTATTCGTGGATAAGCCATTAGGAAATGTGGTCAACCAATGAGCCTCTAGAACTTCGTCTGCATTGTTGCCAATCTCAGCGCTGGAATTCAGAAGAGTTCTTTGTTAAAAGTTGTTGCAATGGCGGATATATTGGTGATGCAGGGCGAGGAGGCTGGAGAAGCTGCTGGGCACGCCGGCGAAGATCTACTACAAGTACGAGGGGACGAGCCCGGCGGGGTCGCACAAGCCGAACACGGCGGTGCCGCAGGCGTGGTACAACGCCGCCGCCGGGGTGAGGAGCGTGGTGACGGAGACCGGCGCCGGGCAGTGGGGCAGCGCGCTGTCGTTCGCGAGCAGCCTGTTCGGGCTCACCTGCGAGGTGTGGCAGGTGCGCGCGTCGTACGACCAGAAGCCGTACCGGCGGCTGATGATGGAGACGTGGGGCGCCACGGTGCACCCGTCGCCGTCGGCGGCGACGGAGTCGGGGAGGAGGATCCTGGAACGCGACCCGGCGAGCCCGGGCAGCCTCGGGATCGCCATCTCGGAGGCGGTGGAGGTGGCGGCGAGGGACGCCGACACCAAGTACTGCCTCGGCAGCGTGCTCAACCACGTGCTGCTCCACCAGACGGTGATTGGGGAGGAGTGCCTGGAGCAGCTGGCGGCCGCCGGCGACGTCCCCGACGTCGTCATCGGCTGCACTGGCGGCGGGTCCAACTTCGGCGGGCTGGTGTTCCCGTTCATGCGCGAGAAGCTCGCCGGCAGGATGAGCCCGGCGTTCAAGGCCGTCGAGCCGGCGGCGTGCCCGACGCTCACCAAGGGCGTCTACGCCTACGACTTCGGCGACACCGCCGGCCTCACGCCGCTCATGAAGATGCACACCCTCGGCCATGGATTCGTCCCCGACCCCATCCATGCAGGTCTCGAATTCTTTTATCGATCTCAACAATGCACACTTCTTCAGTTCTTGCCCCAATTTGAAGTTCTTGGTTGCTAATAAACCCAAGCCATTGTTTGCAATTGCAGGAGGGCTTCGCTACCATGGAATGGCGCCACTAATCTCCCATGTGTATGAGCTTGGATTCATGGAAGCCATTGCCATCCAACAAACCGAATGCTTCGATGGTACTCCGTACTACTATCTCCGTTTTATATTATAAAACTTTCTATCATTGTCCACATTCATATATATATGCCAATGAATCTAGACATATATGTGTGTCTAAATTCATTAATATTTATATAAATGTGGGTAATACTAGAAAGTCTTATAACCTAAAATTATCCATGATTTCGTTCTCCCGAAAGCTGATGTATGTGATTGCATAATTTTTTTTGCTTTGAACTCCAGCTGCGTTGAAATTTGCGCGGACGGAGGGGATCATCCCGGCGCCGGAGCCGACGCACGCGATCGCGGCGGCGATCAGGGAGGCGATGGAGTGCAAGAGGACGGGGGAGAAGAAGGTGATCCTGATGGCCATGTGCGGGCACGGCCACTTCGACCTGGCGTCCTACGAGAAGTACCTGAGGGGCGACATGGTCGACCTCTCCCACTCCGACGAGAAGCTGCAGGAAGCCCTTGCCGCCGTCCCCAAAATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020832