BGIOSGA020887

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Revision as of 12:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020887| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020887, complete gene.| tag = P0691E0...")
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Gene Name

BGIOSGA020887

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020887, complete gene.

LocusTag

P0691E09.5

Ensembl Transcript ID

BGIOSGA020887-TA

Ensembl Protein ID

BGIOSGA020887-PA

Length

6794

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25667132..25673925

Sequence Coding Region

25673864..25673925,25672873..25673003,25672344..25672402,25672143..25672253,25671653..25671796
,25671217..25671294,25670943..25670976,25670484..25670755,25667685..25667990
,25667132..25667290

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25667132..25673925 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25667132..25673925 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTATCCTTCCACCTCTGGCATGATCCAAGCTTCTTCCTCCCTCCATGGCAGCATCACAAGAAGGAACCCTGAAGGATATGACATGCCATCTGATTTGGATCAAGCTCTCCTCCTCTACTTTGATGGCCAGGAACAAGATAAGCCATCTACTCAAGAAGAACCCCACAAACCACTTAATTTTGTAAAAGAGACTCTCAACATCTTCCCCTCCCAGCCAATGGATGAAGAGCCAACTCCAACACCAAAGGCTTCGATGTCAGCGCCGCCCATCGCCGGCTTTTCCAGGAGATCGCCGGCGCCAGCGGCGGCAGATGGCAGGCCACTCACCCTAGGCAAGACCTCCAAGGCAGCATTCAAGAAAGAAGGTGGCAGTGGCAGCGGCGGCGCCATGGCAGCGTCAGCAAGTTCAGAGCTCAAGGGGCCCAAGACGCCGGACCCCAAAACGCTGAGAAGGCTGGCGCAGAATAGAGAGGCCGCAAGAAAGAGCAGGCTAAGGAAGAAGGCTTACATTCAGCAGCTAGAGACAGGCAGGATCAGGCTGGCGCATCTTGAACAGGAGATACAATTCACAAGAGCTCAGGGTGCATTCTGCGGTGCTGGAATTCTAAGCCCAGACGCTGCATTGTTCAACTTGGAGTATGAGCGGTGGCAGGAGGCACACCACCAAGTGATCAGCCGGCTCCGGGCCGCTGTGGAGGAGCACCGACCGGATGGCGAGCTGCAGCCCCATGTCGATGAAGCCATGTCACACTATGGGGTGCTGATGGCTCACAAGGCTAGGCTGGTTGGTGCTGACCCCCTCCACCTCCTCTCCGGCCTGTGGAAGGGCGCCGTAGAGCAATGCTTCCTCTGGATAGGCGGCTTCCGCCCCTCGGAGCTTATCAAGGTTGTGGTCCGGCATGTGGAGCCCCTGACGGAGCAGCAGCTCGCCGCCGTCTACAGCGCGCAGCAGGCGGCGAGGCAGGAGGAGGACGCGCTCGACGGCGGCCTGCAGGCGCTGCTCCGGTCGCTCTCCGACGTCGTCTCCTCCTCGGACGCGCCGTCGTCGTCGCAGCAGACGCCGCCGGTGATGTACCACCCCTCCGCCGCCGCCGCCATGGCTGCGGCGAGCTTCATGGGGCAGTACGGCAGCTACAGCAACCTGCAGCTCGCCATGGACAAGCTCGCCAACCTCGCCATCTTCCTACGACAGGCGGATGAGGAGAGGATGCGGACGCTGCACGCGCTGCGGCGGATGCTGACGGTGAGGCAGGCGGCGCGCTGCTTCGTCGCCGTCGACGACTACTTCGGCCGCCTCCGCGCGCTCGCCTTGTTCTGGACCACCACCCGGCCGCACCCGGCCGCCGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAYPSTSGMIQASSSLHGSITRRNPEGYDMPSDLDQALLLYFDGQEQDKPSTQEEPHKPLNFVKETLNIFPSQPMDEEPTPTPKASMSAPPIAGFSRRSPAPAAADGRPLTLGKTSKAAFKKEGGSGSGGAMAASASSELKGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLETGRIRLAHLEQEIQFTRAQGAFCGAGILSPDAALFNLEYERWQEAHHQVISRLRAAVEEHRPDGELQPHVDEAMSHYGVLMAHKARLVGADPLHLLSGLWKGAVEQCFLWIGGFRPSELIKVVVRHVEPLTEQQLAAVYSAQQAARQEEDALDGGLQALLRSLSDVVSSSDAPSSSQQTPPVMYHPSAAAAMAAASFMGQYGSYSNLQLAMDKLANLAIFLRQADEERMRTLHALRRMLTVRQAARCFVAVDDYFGRLRALALFWTTTRPHPAAG</aaseq>

Gene Sequence

<dnaseqindica>1..62#923..1053#1524..1582#1673..1783#2130..2273#2632..2709#2950..2983#3171..3442#5936..6241#6636..6794#ATGGCTTATCCTTCCACCTCTGGCATGATCCAAGCTTCTTCCTCCCTCCATGGCAGCATCACGTAAAACCAACAATTTCTTCCCTCAACCTTTGTCTTGATTAATTATCTATTTCATCTAGTCTTGATTCTCTATTTCACTAAAACAAAGGACTTGTGTATGTCCATATTTGTAAAATTTAATCTATTTCCCTACTGACAATACTGCTTTTAATCATGATTACCCTGAAATGGATCTCTATTTCATTAAAATAATGGACTTTGTGTACGTTATTGTTTGAAAAATTAATTTATTTCCCTTCTGACAATCATGCTTGTTTCCTCAAATGGATTAATTGTGATCAATCTACGCCCTTTTTCACCTTAGCTACTTGGAGTACTTCTGTTTTTGTTTTCTCATGCATATGATGATTTTCTCAGACTAAGGTGGCATTTTATATAATGATTGAGATCGCGAAGATCGCTTAAGAAGTTTTACCCTTCCCCCACATGTTTAATTCTTCTCTGTTTTTAGTTGTTTAGGGGGGATTAATTGATTGACTAAAAGTTTTTTTTCCTGCAGAAAAGAACCCATATTACCCCCTCCCTTTTTTTTTTTGTTTTTAAGCAATTAGTATGTTTAACTTTTGCACCCTTTTCCAACATCAATTTGTTCATTTCTAATTCTGTGGACCACATTCAGATAATCAACTTAATTGTTCCTTTCTAATTCCATCCCCCCCCCCCCTCTTTTTTTTAAAGCAATGAGTATGTTTAACTTTTTGCACCCTTTTCCAACATCAATTTGTTCCTTTCTAATTCCATGGACCACATTCGGACAATATACCATTAAGAAAAATCAAGCTCTAAATCAGTCGCAGTAGAGCTACGTACTAAATGCAAAATAGAGACTAATGGTATATTGTCATAATGTGTAAATGCAGAAGAAGGAACCCTGAAGGATATGACATGCCATCTGATTTGGATCAAGCTCTCCTCCTCTACTTTGATGGCCAGGAACAAGATAAGCCATCTACTCAAGAAGAACCCCACAAACCACTTAATTTTGTAAAAGGTCAATCTACTGTTAAGAGTATTTTGTCATAGTATATTACAAACATGGCTTGAAGAAAATCACAAAGAATGTCATGCATACATTGATTTCTGTGATTTGACTTGCTTTAGCTTATAGCTAGATGTGTAAGATTAGGAATGGCTACCAATCTTCTCATTCCCTTTCTTTTCCTTTTGGTCATTATAGTCATACATGATTTTATTAGCTAATTGGAGAAGAGTGACACGTAACAAACATAGCTGATATGGTCGCAGGATCTTGCTAGAAGATTGCAACCAAAAAGAACATATTTTTTGCCCCACTTTTTTGAAGATCTTGGCCACACGCATTTGAAAAATTAGCACAGATATATATCTGGGAGACACATCAGTTGCATGTGTGCATGAAAGCATGCAAGCACCTGCCTACAAACTATGTAAATTACTAAGTCATAATGCATAATTACTGAACTTGTTCATGTGTGCATGCAGAGACTCTCAACATCTTCCCCTCCCAGCCAATGGATGAAGAGCCAACTCCAACACCAAAGGTATATATGTTAATATGTGCACATATGTATCTCTAGCTAGCTATCACAATTTAAGCGTGTTGTTCACAAGGTGCCAGTTCTCCTCTTAAGGCTTCGATGTCAGCGCCGCCCATCGCCGGCTTTTCCAGGAGATCGCCGGCGCCAGCGGCGGCAGATGGCAGGCCACTCACCCTAGGCAAGACCTCCAAGGCAGCATTCAAGGTTTTAACTTTTTTACACACGTACGCCTCTGTAGTTGTCCGGATTTTTTCTCGGTTAGACAGTTGTATCATTTTTTTACCCCATCATATGGGTGGCGTTCTAGTCTTTGGATAGATGGCTTTTGATCAATCTTGTGTTCCCTTTTAGTTGTGTATGTTGGGTGTTTTGGCTGTGTGCACTTTCGTGGTACAGAGGCTATGAGTATACTCAGACTTTTGAGTTCAATAAACCTTCCATTATCTAATTAAAAAAGGATAGTTGTATCACATTGGTATAACTGGGTGAGTTAAATAAAGTTTCCATTATCTTAGATGTTACTATAATTTTGTATCCATATGGCAACTAGAAAGAAGGTGGCAGTGGCAGCGGCGGCGCCATGGCAGCGTCAGCAAGTTCAGAGCTCAAGGGGCCCAAGACGCCGGACCCCAAAACGCTGAGAAGGCTGGCGCAGAATAGAGAGGCCGCAAGAAAGAGCAGGCTAAGGAAGAAGGTGATTACTTACTATAGTTACTACTATTACTATATACCCCATTGATTAACCAGCTCAATAGCAAGCTAAGCTAGTTAATTAGTACTAGTACTCTTGTACTAATATCAGTCAACAAATGAACAAGTAGTCAGCCCTCAGAAGCCTAAATAAACAAAAATCTTTGGAGCTAGCAAGAAAAGCAAAGAGATGGTGGAAGTAGCTAGTGAAGTTAACCTACCACCTAATGGGAGTTGTGTGTTAGACACATGCATGGGCTTTGCATTTGTTTTTTCTTTGCAAAATCTGATACCTTCGCTTCATATTATCATGTGTAATTAATCCTTAATTTGTTCTCTTTTTATTTTTGTCTGTGTGACAGGCTTACATTCAGCAGCTAGAGACAGGCAGGATCAGGCTGGCGCATCTTGAACAGGAGATACAATTCACAAGAGCTCAGGTGAAAATTAATAAGCAGCAAAGAACTGAATCATCTCACAGAGGACGGATTTGGTTTGGGAAATATTAATTACTACTCGCAATTTATAAACCACCAATATTTGTAGGAGAATCGAAGTTTCTACTACTAGGCAAATAATCAATATCTAAAATTAAGAACAAATTATCTCGAACGAACAATTTGTGTTTGTAAAAAAAACAATTTATAAGTTATATGATGTGTTTCTGTATCTCCCTGCAGGGTGCATTCTGCGGTGCTGGAATTCTAAGCCCAGGTTAACACTTTCGAACTAGCATTTAATCATAATAAAGAGATTTACACTGCTCCATCTCACGTTAAACTTAACACGCCTAGCAACAATAGTTATTTGCATGTCTTGGTGCAAAGACCATAAGTATTTATATATGTCATATCATCTAACAAAAATGCATTTATATATACATTATGTGAGGGCGTTTCAGACGCTGCATTGTTCAACTTGGAGTATGAGCGGTGGCAGGAGGCACACCACCAAGTGATCAGCCGGCTCCGGGCCGCTGTGGAGGAGCACCGACCGGATGGCGAGCTGCAGCCCCATGTCGATGAAGCCATGTCACACTATGGGGTGCTGATGGCTCACAAGGCTAGGCTGGTTGGTGCTGACCCCCTCCACCTCCTCTCCGGCCTGTGGAAGGGCGCCGTAGAGCAATGCTTCCTCTGGATAGGCGGCTTCCGCCCCTCGGAGCTTATCAAGGTAGGCTACTTCTCTTCTGTGAATGTTTGAATTTTTTATAGTTTTATATCAGATTCATGCTTTCTTTTTAAAATAGTATGAAAGTTTTGCTGGATCAATCAGACGGTCCAAATCCCTTACAAAGTACCGTACATGACATCTTTTACAATGGTCTATACTGATAACACCCCACCAACAAGTAACATACCACCTCACGTGCTACCTTGATCCATCTCACCAACATCGCTCATGGGCCTTCCTCTACTGCAACCAGTTTTCTCCTTTGCTGCTTACGAAAATTGATTTTTCATAAGTGGTACAGTACTTTAAGAGTATCCCTGTTTTTATAGTCAGCTGCCATAAAACTACCGTTTCCACAAGCAGTCACAGAGCAGGATTTTTTTAAGTCCACCTGTAAAAATAAATAATATGTAATGCCCGCGAAAATGGTTTTTAGTAGTGAGCTTCCTCCCCTCTCCTGTTCATATATTTTTTTAAAAGAGACATTAATTTGCTAAATTATATTAGGAGGCAAGCATCTTTTTATGTACAAGACGTGGCACACCCATAGAGGTGTGCCTTGAAAAATGGAAGAATTTTCTTAAGCAGCTGTCCCGATAAAATAAAATGTTAGCTGGAGATGAATCTATACCCACGTCTTAATGTCCAAATTCATTAAAATTCCACATACGCTTTTCAATCTACCTGTCATGTTCTAGATGAAGGTCAAAATTTACTCAATACTTTGCCTCCATATATTTTCCTCGTTACAAAAGCCTGATTGAAACTTGAAAGGGGCAGCAAAAGAATTTGCCGTTAATTTGAAATTTCACAATTTCTTTGTTAATTTTGCAATTTCGGTCCATACCTGTATTGTGAAGCAAAATTTAAAACCTTGATTCTTTAAAGAAGCAAGAGCAGGCTAAGAAAGGTATAACGCATAAATGAGCTTGAATACTCTTAGAAAAATAATTACATTCAAGTAAATATATTTATTTGTGCTAGTTTGGATATTGAGAGCAGTGTACTATAAATCAGTCAGCACCTTCTTCTATTTTTCTTTTTTTTTTCCCATGAGTTAGACACATTAGGTACCTAAGCTGACAACTAATGCAAAAATAGCAGAAATACAGTTTAGGTACCCAAAGTTTCTTTTTGCTGGGATTACCCAAAGTTTTACGGGATATTATAGGAAAGCACAAATTTAAGAGCACGTTATATTTACGGGATTTTACCCAAAATTGTACAAAATCCATACGTTCCAAATTAAGCTAGGAGCCCTATATATATATGTCTTGGAGCACGGAAAACTATTGTTCTGGAGGAGGATATATAGATGCTTTGTTCGACTGATTAAATGCTACAGATAGCATATATACGAAATCACGAAATAAAATTGTGCACTGGAGACATATATATGTTCCAATCATCAACCCAAACAAAACATTTTTAAGATTATGTGGCACTCTTGAAATCGACAAAATAAAACTAACTCCCAATGGCAATGGTAATGGCCCTTGCCACCTGCCGCTCAGCTACCAAAGTAAGTACTAGTAGCTACTCCCACTGTCCCATAATATAGCAATCTAGTATCGGATGAGATATTTTATAGTACAATTAATCTAGATAGGAAGGTGTCTAGATTTATTATACTATGAAATGTCACATCCAGTACTAGGACGAAGGGAGTAGTTAGGTAGGTGATGGGCAGTTAGGCTTTGGAATTCTTCATGGATTGAGAAGTAGAGATGTGTACATGCGCAAGCGTCGATCACCAGATGGCCGGGGTTGGTGGAGATCGATATATCGAGCAGGTAGAGGTAGCCGATCGATCTAGCTACGTTTGTGTCACATTCTCGATGGAGACATCGTCTGGAACCGTTGATAGAGATGCATTTTAGTTAGGACCCCTGAACATGCGTGTTGTCGCTCGTTAATTTCTTTCGTCTAATAATCTAATTTTGTTGTTAAAATAACTGAATTAAATAACGATGTTGCGAGCATTCCATATTTTACCATGCGAAAAGATAAAATTTTCATTTGATTAGATGAACGAGAACAGATAAGTAGTACAGCTACATGATTACAGCTACATGATTATGTTTTTCTTTCTCTTTTTTAAGATATAAATTGAACTTGAACTTACACATATCTATGGAATGACATGTGGTAGAGGAATCTATAAATATTCAAAATATTTCCTGACTTTAATTTTGTCATGATTAATTAGTTTGAAGATATATTTTACTTTTCTTCTTAGCAATTTCATAAAAGAGCGTGGTGCGCAACAAATTAATATAACTCGATAAAAAGCCCTTAACATTAGTCCTATAATCAAATTCAAAATGGATCATACATAGCATTTGGCGCAATTCATATGTTGAATTACATAGCATCTCGCACAATTCATATGTTGAATTAATTTTTAGGTATAGCTTATTAGATACTTCCTCCATTTTAAAATAAGCAAACCTTGTAAATCTTTTCTGAATCAATTACTGCATTTATGCACAGGTTGTGGTCCGGCATGTGGAGCCCCTGACGGAGCAGCAGCTCGCCGCCGTCTACAGCGCGCAGCAGGCGGCGAGGCAGGAGGAGGACGCGCTCGACGGCGGCCTGCAGGCGCTGCTCCGGTCGCTCTCCGACGTCGTCTCCTCCTCGGACGCGCCGTCGTCGTCGCAGCAGACGCCGCCGGTGATGTACCACCCCTCCGCCGCCGCCGCCATGGCTGCGGCGAGCTTCATGGGGCAGTACGGCAGCTACAGCAACCTGCAGCTCGCCATGGACAAGCTCGCCAACCTCGCCATCTTCCTACGACAGGTAAATCAACAATCCTTTCTTCTAGACTTTTTAAGTTAATTTCTCTGAGCACTGAAGCTGATTTGGGTTGGGAAATTATTCTAAAACTCTCGAGGGATGTCCTCTCGTTTTTTACATGGTCTTACATAGTTATAAAAAAAATTAAAAAGATAATTTGTTTACAAGAAAATTAAGAAGATAGATTAATATGTGATATATTACTCCACAAATTTTAAGTTGTATGTTTGTAGAGTGATAGCATACTACATATCTTCTTAAAAAAAATTAAAATCTTTTATAGCTATTTAAGTGACATGCAAACAATAAGATAACATCCATTCAAGAGTTTCAAATCCACCCTCGATTTGGGTTGCAAGTTTTCGCATCGGTGACGACGTTGTGCGTGTATGTGTAGGCGGATGAGGAGAGGATGCGGACGCTGCACGCGCTGCGGCGGATGCTGACGGTGAGGCAGGCGGCGCGCTGCTTCGTCGCCGTCGACGACTACTTCGGCCGCCTCCGCGCGCTCGCCTTGTTCTGGACCACCACCCGGCCGCACCCGGCCGCCGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020887