BGIOSGA020891

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Revision as of 12:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020891| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020891, complete gene.| tag = P0417G1...")
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Gene Name

BGIOSGA020891

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020891, complete gene.

LocusTag

P0417G12.19

Ensembl Transcript ID

BGIOSGA020891-TA

Ensembl Protein ID

BGIOSGA020891-PA

Length

5684

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25623775..25629458

Sequence Coding Region

25629231..25629458,25628854..25628994,25628505..25628570,25627066..25627134,25626879..25626953
,25625829..25626066,25623775..25623818

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25623775..25629458 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25623775..25629458 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCACCATTCCCCGCCGCCGCCGCCGGACCTCTCCTCCGCCGTGGGCGAGATCCACCCGCCGCTCGCCTCCGCCGCGCGCTCTTCCTCCAACGGTGGAGGCAGCGGGGGCTCCTTCACCGCGCTGCTGGGGCTCCCGACCTCCCAGGCGATGGAGCTCCTTCTCCCCACCGCCGCCGCCTCCGCGCCGCCGCCCCCGCCCGCGTTCCCCGCCGACCCGCACCTCGGGAAGGCGGCTGCGAAGAAGGGGAAGACGGCGGCGAGCGGCGAGGACGGTGGCGACGGCGGCGAGGACGAGAAGCCGGCGTACGTGCACGTGAGGGCGAGAAGAGGGCAAGCCACCGACAGCCACAGCCTCGCCGAGCGGGCGAGACGCGAGAAGATCAATGCGAGGATGGAGCTTCTCAAGGAGCTGGTCCCCGGATGCAGTAAGGTATCAGGAACAGCACTGGTACTGGATGAGATCATCAATCATGTCCAATCTCTTCAAAGGCAAGTTGAGTACTTGTCAATGAGGCTCGCAGCTGTAAATCCGAGGGTCGACTTTGGTGGGCTAGACAACTTCTTGACTACGGAGTGTGGAAGGATAACAGGCTTGAACTACAAGAATGGAATGGATTTGGAGCAGGTCACCTGGCCAGACATGGGCGTCCATGGAGCAAGGAATCTCATGCAACTACAACAGCAGTTCTGGCATGGTGATTTAGCACACCCGCTCCAGCCGCCTTCACAGTGGGAAAAGCGGACGGATACCAATCCCCCTGTCTTTAGCAATTCAAGTTCCTCCCTCTTCGGCTATGATCTAGCAAGCTCTGGAGCGCCGGCCCAGACAGGCAACAAGCTAAAGACGGAGCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MHHHSPPPPPDLSSAVGEIHPPLASAARSSSNGGGSGGSFTALLGLPTSQAMELLLPTAAASAPPPPPAFPADPHLGKAAAKKGKTAASGEDGGDGGEDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKNGMDLEQVTWPDMGVHGARNLMQLQQQFWHGDLAHPLQPPSQWEKRTDTNPPVFSNSSSSLFGYDLASSGAPAQTGNKLKTEL</aaseq>

Gene Sequence

<dnaseqindica>1..228#465..605#889..954#2325..2393#2506..2580#3393..3630#5641..5684#ATGCACCACCATTCCCCGCCGCCGCCGCCGGACCTCTCCTCCGCCGTGGGCGAGATCCACCCGCCGCTCGCCTCCGCCGCGCGCTCTTCCTCCAACGGTGGAGGCAGCGGGGGCTCCTTCACCGCGCTGCTGGGGCTCCCGACCTCCCAGGCGATGGAGCTCCTTCTCCCCACCGCCGCCGCCTCCGCGCCGCCGCCCCCGCCCGCGTTCCCCGCCGACCCGCACCTCGTCGACCGCGCAGCCCGGTTCTCCGCGTTCGCCTCCCCTTCGCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGTTCCTCCTCCTCCAAGCGCAAGCCCGACCCCGCCTCCAAGGTATCTCGTCTCGTCGCGTCGCGCGCGCGCGCGCACTCCGCTGCTTTCCCCTCGGCTTCGTTTCTCATTTCGTCTCTCCTTTGGATTCCGCTGCAGGGGAAGGCGGCTGCGAAGAAGGGGAAGACGGCGGCGAGCGGCGAGGACGGTGGCGACGGCGGCGAGGACGAGAAGCCGGCGTACGTGCACGTGAGGGCGAGAAGAGGGCAAGCCACCGACAGCCACAGCCTCGCCGAGCGGGTGAGTTCGTGAGTTCGCCGTCGCCGGCAGGCTCGCCGCTAATCACCCACTTAATTAATCACTCGCTAAACCTTAAGCCAATCTCCTCGCGGGATTAGATTTGTGGGGTTTAATTTAATTTAACGAGCTGTGGATTAGGCAATGATTGGGTAATTAGGACGTGGCGACGTCGCTGTTTTAGTGCCTTTTCAGGGGTTGCTTTCCTCGTTAATTACTTAATTATTCGTTTCCTCTTGGATTTTTTATGACATTATTATTATCATTTTTTTTGGGTGATAAACAGGCGAGACGCGAGAAGATCAATGCGAGGATGGAGCTTCTCAAGGAGCTGGTCCCCGGATGCAGTAAGGTCAGCAATATCTTCTTGGCTTCGAATTTCTTCTACAAATTTATTTTGCTGAGTTTTTCTAAGAGATAAACTTCTTCCAGCTTTTGCCTTTGGAAGGATACAATTGCCAAGGAGTTTTGTGCAAAGTACACTCCTTTTTTTTCCTGCTTTCGGTGGTCTTTTTACTGCTTTTGATGGCTTAGTGAAATTTGTCATCGCATAGCTGTTTCTGTTCGGTCCAAAGGCACACTAGGAGTCCAACAAAGAGTAATGCCAAGCGTTGGTGTGCAGCAGCAGCAGCATGGTCAGTCTGCTTGGCTCACTTCTTGCAAATTCACAGCTCGATCCAATACAATGCGATCTTAAACGTGGTGGTGCGGAGTTTATCCTTCGCTCTGGCAGGCATGGCGACATGTCCATATGGGCGAGTTGCATTGCACGACGGAGGAGAAGTGGGCGTGTGGATAATATGGCATTTGGTTTGGTTCCCTTGGCCCTTGTGGATGATAAGGGAGACACCTTGATCCGGTGTACCTAACTCGAGAGGGTGAGGGGATGGGGTTTGGCCCTTGGTGGTGGGTTGTCTGGGCAGAATGTGGCAGCCACTTTAAAAGACACCGGAGGACGGTAGCTTAATGGAGGGGGGCTTGTATGTTTGGTCGCTGTAATGCTGCAATGAGTCCATCTCCATATCTCCATCTCTCTCTCTCTCACTTTGGAATGTTGCTATCCCTATTGCACACGCAATAATGTGTGCTTATGGGTTGGCATCTCTGGGTGTTGGATTGTGGAAGTAAGGCTGTGAGGGTAGTTTACCATTGGGGAGTATTGGTTGGTCTTCATTAACTATGAATTCATGTGGAAGTGATTAGCCTGTTGTATTGGTGCGGTAGTTTGACTATTATTTTTACTGAAAGGACAGCAGCCTTTGGGCTGGAGGTGTCCATCACTGTGAATGATTGTATTGGTCAATCCGCTGTGGGATTTATGAGGGCCATTGTCTTAAACAAACCAGTACATTACTGCCAATATAAGCTGGTGGTTTTGTTGTATATGCTTAGAGCTTCTCTAACTAATTAACTTAACAGTCGTAAACAGGCCTATTTTAAGATCACATTTCAAACTTTGAAAAAAATGAAGAGTAGTACTATGCACCAACTTCTGCACTTGGATTCTGCAACCAAACTGCTGCTGCTATTTTGTTTCATGTTCTTGTTTTATAGTGGTAGCTCCATTCTTTATATCCAAAACTGAGGTTAAACTTTATGTGGTTTTGTCATAGTTTTGAATTGTTTTTTTTTTCCATCATGAGATTCATTGTTTTATTGTAGTAACTCAGGAAAAGTAATTACTTTATCGACAACAGTTGTTTGATCTGTTTTTTGTAGCAGGTATCAGGAACAGCACTGGTACTGGATGAGATCATCAATCATGTCCAATCTCTTCAAAGGCAAGTTGAGGTAACTGTTCTTTTTTTTTTTTTTTGCTTATGATACCTTAAGTCCCAAATAACCCATTTACCTTAAGATGTTCACTCATGTCATTGTTGTTTGGTAATTTTGATTGTTTCAGTACTTGTCAATGAGGCTCGCAGCTGTAAATCCGAGGGTCGACTTTGGTGGGCTAGACAACTTCTTGACTACGGAGGTACCATTATGACAAATACTGTTTCTTGAAGATTTCTGCAAGTTTAGCTTGCGTGGATTTACAACAACAATTTCCTGTGTATATGTATTGCTCCCTTCTTGCCCACATATCGACCTTTTTTTTTAATACTGGAAAATGCTTTGATACTTCGCCAATACGCATATATCCGTATCAGTTGCCTATTGGATACTGAGATGGCAGTTTAGGGAAGTATCAGTGATTCATAGACCATAGCTGATTTCTTTGGCCCAGAACTCTCCTTTAAATTATTTTGTAACTGAGTAGTTTGGCCTCTGCTGAAAACTGAAATTTATCTCTTCCCATCATTTATTTGCACTATTTTGTACTAGTAAGGAGAGTGTGCATTTCTGTGAAACTTATTGTTCGTGCTTTTGACTTTGCCTTGACAGCCAACAGTCTACAATTATTCCATATAAATTTTGCCTTTGACCTCTTAAAGAGAAAGAATGCCTACTACTATTAGTACAATAAGTAGTATCTAGATGGCTAGCACTTGAACAATGGTTACCTTAGAATGCCTAGAACTAGTTACTTTTACAATTAAGGCATCATTGATAATGATAATATTGCTCTTGGAGATATATGCATGATTAGACCATTGTAGCTGGATCACATGTTTTCTGCAGAATTTTGCATTTGTGAAATTCCATGTAAATTTTCTATTATGCATGTCGTGTAATTCTGTAAATCTCTCAGAAATAACAAATTCAATTAAAGTTGATCATGATTCACATTTTAGGTTCATTGATTATGCTATTGGGCATATACTCTGCTTACTATGGTATTTATAGTGTGGAAGGATAACAGGCTTGAACTACAAGAATGGAATGGATTTGGAGCAGGTCACCTGGCCAGACATGGGCGTCCATGGAGCAAGGAATCTCATGCAACTACAACAGCAGTTCTGGCATGGTGATTTAGCACACCCGCTCCAGCCGCCTTCACAGTGGGAAAAGCGGACGGATACCAATCCCCCTGTCTTTAGCAATTCAAGTTCCTCCCTCTTCGGCTATGATCTAGCAAGCTCTGGTAAAACTTGCAACCAAACCTATATCTCATTGAATTTAGTTGTTTGTCATTTACTTTTAAAATTTTTCAGCCTTGATTGGACCACAACTTTTGTCTCTTTCGTTGTTCCAGAGTGTTTAGAAGTACATAGGTAAATGGGAAATTGTGGTAAAATATGTGAAAAACCAGTTTCTTCCAGGGAAAACTACTACTACATCTTTAGGAAAGATTATCATACCTTATCTCATGCACATGCTAATAAAAGTACTTGTTATAAATTCTACATAAATAAATAATATTTACCTTCTGATTTGGATGTGATGGAGATGACTATCCTAATTGGGCCCGCTTCTATTTGATAGTGAATGTTTATTAGCAACTAGGGGGTTTAAGGAAGCAGGAACTTGTAACTTTCTAGAAAGATTAGAGAATGCTTTGTTTGTTCTTCTTCCCTTTGTTTGTTCACTCAATCATTATTGCCATCATCGCCACCATTTTGGATGGTAAGGGGCCATAGATGTGTTCGTCTGGTGGATCTGTTCTCTCTGGCACCAGCGGACCCAACTGGTTGGTGTGGCTGGGCCCGAATCAATAAATGCATGTCTAGAAACCATATCGCTCCCGGCTTTCCGTTTGGGCTTGGCTGCATAAGGCCTGTAGATGCAGATCTGGTCCCTTTGGCCCTTCTGATCACTTGTACAACTGTGAAGGGTCCACTTTTTCTGTAAGTTGTCCAGTGCCTGTCTAGGGATCCCCTTTCTTGCAATGGAGGGAGCTAGCTAAAACAACTTTAATCTCAGTGCTACTATTTGTACGCTGTACTGTAGTATTGTTTTCTATTCAACTAGTTGAATAGCAAATACATAAGCGAATCTAAGGGTTTGGATCTTAATTTGACATATCTAACGACGATAATTTCATTCGATTATGGCAATTCATGTGGGCTAGATTTACGTTTGCATTGCATGACATACATTTTGCGTGCCATTTGACTGTCCTTGTAACTAGAGATGTAGTTTTATCACTGGGTAGCTGGGTACTGAAGTTTGTAGTGGATCCTATATATTTATCAAGGAATACACCGTAGCACATGGTTCAGTTTAAGAGGTCGATTATATAGCTTGGCTAAGAGAGTGGATTGGATAACTAGTACAGATATTGTGAGAGCCAAATGAGCCAGCTCCATTGTCTAAGAATCATGTTTTAGCACTATCATGAAGTTATACTCTTGCATTTGCTAATGAGTAAGATGGAAGAAAAGGTGTGTAGTAGAGGTGATCTGCCGTTTGGATCTGGTTAACTGATCTGCAGCTCTGGATCCAAGCAGAGCTCTTGGAGGGACAAATGCTATTGGAGGTACAGACCCAATCATGCAAAGCGTTCAAGGATCATTAAACCTTTAGGGCCCTCCCCTGAGGCCCTGACTACATGATATCTGTACTGCATTACGGCTGGCAGAATCTGTTTTTGCCAGAAATTATTGCAGCTTCTTCGTGTACCGGTGTCTGCGCTCAAAGCTGAGTGGTATACAGCAAGCTTTGTCCAGTCCTCCCCAGCCATCATCTTTATCACGCGGCCCATCCCCTTGCAGCTCTGTCTTAGCAGGGCAGATCTCAACCTCATGGCTTCACATTGAAATGGACCCAACTTGGTGTCGTTCTAATCTCTGTGGTTCAGCTCATTCGCTTTGCATTCCTCGAAAATAGACGGTCTTGCTGAATTCCCCTTGCTACTGACAATGTTATCCTATGCATGCATTTTTGGACCTTTCTTTTTTGGCTTTCGTATATAATTTCAAGAAACTACTGAATAGGACTATAGGAGTACTCAATTAACTTATGCAAGACTGGTTTTGGCAAATTCTTGGAATTTGACTGATCTGAACTGAACCCCCTTTTTACCTGTTACCAGCTGGTCACTTGATGCTGTCCTAGCTACTATTGTCCTCCCCTCTTGAAATCATTGTACCCCAGGAACCCTACCACTAACTTTGACCTCTTCTACTTTTTTTTTCCCCATGTGTTTGTGCAGGAGCGCCGGCCCAGACAGGCAACAAGCTAAAGACGGAGCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020891