BGIOSGA020893

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Revision as of 12:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020893| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020893, complete gene.| tag = P0417G1...")
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Gene Name

BGIOSGA020893

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020893, complete gene.

LocusTag

P0417G12.14

Ensembl Transcript ID

BGIOSGA020893-TA

Ensembl Protein ID

BGIOSGA020893-PA

Length

4048

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25604633..25608680

Sequence Coding Region

25608173..25608680,25607847..25608049,25607332..25607529,25607170..25607241,25606979..25607074
,25606732..25606811,25606566..25606644,25606247..25606490,25605984..25606177
,25605764..25605869,25605594..25605680,25604633..25605462

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25604633..25608680 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25604633..25608680 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCGGAGGAGAAGCCTCGCCGGGGGTGCGGCGGCGGCTGTGGTGGTGCTCGCGGCGGCGGCGTCGGCGTTCCTGTCCCTGCTCGACGGCGCGGCGGCGCTGCACCTGTGCACGGACAGGCTGTTCAACGACACGCAGGGGAGGCACTCTGACGGGCTGCCGCACCTGAACCAGGCGGAGGAGGCGACGTGGATGGGCCTCCTGCCCCGCCGCGCCGGGCCCCGGGACGAGCTCGACTGGCTCGCGCTCTACCGGAGCATCACCCGCGGCGGCGGCGGCGAGCCGGCGGGGTTCCTCTCGCCGGCGTCGCTCCACGACGTCCGTGTCGACCCGTACGGCGCCAACATGTACTGGCAGGGGCAGCAGACCAACCTCGAGTACCTCCTCTACCTCGACCCCGACCGCCTGACATGGACGTTCCGGCAGCAAGCCAAGCTCCCCATCGTCGGCGAGCCCTACGGCGGCTGGGAGGCGCCGGACGGCCAGCTCCGCGGCCATTTCACAGGTCACTACTTGAGCGCGGCGGCGCACATGTGGGCGAGCACGCACAACGACGCGCTGAGGGAGAAGATGACCAAAGTGGTGGACATCCTCTACTCTTGCCAGAAGAAGATGAACACGGGTTACCTCTCAGCCTACCCTGAATCCATGTTCGACGCGTATGATGAGCTGGCCGAGGCATGGTCGCCCTATTACACCATCCACAAGATCATGCAAGGCCTTCTTGATCAGTATACATTGGCTGGAAACCCGAAAGGTCTTGAGATTGTGGTGTGGATGACTGATTACTTCAGTACTCGTGTGAAGAAGTTGATACAGGAGTACAGCATTCAGAGGCACTGGGAAGCGATAAACGAGGAAACTGGTGGATTCAATGATGTTATGTATCAGCTTTATGCCATAACGAAAAACCAGAAGCATTTGACGATGGCACATCTTTTCGACAAACCGTGCTTCCTTGGACCACTTGGGCTGCATGATGACGACATATCGGGATTGCATGTTAACACACATGTTCCTGTGATTGTTGGTGCACAAAAGAGATATGAAGTAGTTGGGGATCAACTTTACAAGGAAATTGCAACATTCTTCTTTGATGTTGTAAACTCCTCTCATACATTTGCAACAGGAGGCACATCTACCATGGAACACTGGCACGATCCGAAGCGGCTAGTAGATGAGATCAAAATCAGCTCAAATGAGGAGACTTGCGCCACATACAACCTGCTTAAGGTCTCACGAAACCTGTTCAGATGGACGAAGGAAGGTAAATACACCGATCACTATGAGAGGCTACTTATCAATGGGATCATGGGCAACCAGAGGGGAAAAGAGCCTGGTGTGATGATCTATTTTCTTCCCATGGGCCCGGGACGATCCAAGAGCATCAGTGGCATGCCCACCTCTGGCCTACCCCCCAAGAACCCAGGGGGCTGGGGTAATGCAAATGCTACATTTTGGTGCTGCTATGGGACAGGGATAGAGTCATTCTCAAAGTTAGGGGATTCCATCTACTTCTTGGAAGAGGGAGAAATCCCTGGGCTTTACATCATTCAGTACATACCAAGCACCTTTGATTGGAAAGCGGCAGGCCTGACTGTTAAGCAGCAGGCCAAACCACTGTCCTCAACAGATTCTCACTTTGAGGTTTCAATCTTCATTTCTTCAAAGGGAGATGCCCGACCGGCAAATGTGAATGTGAGGATCCCGTCATGGACATCCGTGGATGGAGCAATAGCAACTCTAAATGGCCAAAAACTCAACTTGACATCTGCAGGCGATTTCCTCTCGGTGACGAAACTTTGGGGCGATGACACCTTATCTCTCAAATTCCCCATCACCTTAAGAACCGAGCCGATCAAAGATGATCGGCCGGAGTATTCGTCCATCCAAGCGGTGCTGTTCGGGCCTCACCTCCTCGCCGGCCTGACGCACGGGAACCAGACCGTGAAAACCAGCAACGACTCCAACAGCGGCCTCACCCCCGGCGTCTGGGAGGTGAACGCCACCCACGCCGCCGCCGCCGTCGCCGGCTGGGTCACCCCGGTGTCGCAGTCGCTCAATTCGCAGCTCGTCACCCTCACGCAGCGCGACGGCGACGCGCAGGCGGCGGCGGCGTTCGTCCTGTCGGTGTCGATCGCCGACGGCGCGCTAACGATGCAGGAGTCCCCCGTCGCCGGGAGCGACGCGTGCGTACACGCCACTTTCCGGGCCTACCACTCCCCCTCCGGCGCCAGTGCCATCGACGCCGCCACCGGCAGGCTGCAGGGCCGCAACGTGGCGCTCGAGCCGTTCGACCGGCCGGGCATGGCCGTCACCGACGCGCTCAGCGTCGGCCGGCCGGGGCCGGCCACGCGGTTCAACGCCGTCGCCGGGCTGGACGGCCTCCCCGGCACGGTGTCCCTGGAGCTCGCCACCAGGCCGGGATGCTTCGTGGCAGCCCCCACCACGGCCTACCTCGCCGGCGCCAAGGCTCAGGTCAGCTGCCGGAAACCCACCGCCGCCGGCGGCGGCGAAGACGACGACGACACGGCGTTCCGCCGCGCCGCAAGCTTCACCCAGGCGGCACCTCTCCGTCTCTACCACCCGCTGAGCTTCTCGGCGACGGGCACCGACAGGAACTTCCTCCTGGAGCCATTGCAGAGCCTCCAGGACGAGTTCTACACCGTCTACTTCAACGTCCTCACCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MTRRRSLAGGAAAAVVVLAAAASAFLSLLDGAAALHLCTDRLFNDTQGRHSDGLPHLNQAEEATWMGLLPRRAGPRDELDWLALYRSITRGGGGEPAGFLSPASLHDVRVDPYGANMYWQGQQTNLEYLLYLDPDRLTWTFRQQAKLPIVGEPYGGWEAPDGQLRGHFTGHYLSAAAHMWASTHNDALREKMTKVVDILYSCQKKMNTGYLSAYPESMFDAYDELAEAWSPYYTIHKIMQGLLDQYTLAGNPKGLEIVVWMTDYFSTRVKKLIQEYSIQRHWEAINEETGGFNDVMYQLYAITKNQKHLTMAHLFDKPCFLGPLGLHDDDISGLHVNTHVPVIVGAQKRYEVVGDQLYKEIATFFFDVVNSSHTFATGGTSTMEHWHDPKRLVDEIKISSNEETCATYNLLKVSRNLFRWTKEGKYTDHYERLLINGIMGNQRGKEPGVMIYFLPMGPGRSKSISGMPTSGLPPKNPGGWGNANATFWCCYGTGIESFSKLGDSIYFLEEGEIPGLYIIQYIPSTFDWKAAGLTVKQQAKPLSSTDSHFEVSIFISSKGDARPANVNVRIPSWTSVDGAIATLNGQKLNLTSAGDFLSVTKLWGDDTLSLKFPITLRTEPIKDDRPEYSSIQAVLFGPHLLAGLTHGNQTVKTSNDSNSGLTPGVWEVNATHAAAAVAGWVTPVSQSLNSQLVTLTQRDGDAQAAAAFVLSVSIADGALTMQESPVAGSDACVHATFRAYHSPSGASAIDAATGRLQGRNVALEPFDRPGMAVTDALSVGRPGPATRFNAVAGLDGLPGTVSLELATRPGCFVAAPTTAYLAGAKAQVSCRKPTAAGGGEDDDDTAFRRAASFTQAAPLRLYHPLSFSATGTDRNFLLEPLQSLQDEFYTVYFNVLTK</aaseq>

Gene Sequence

<dnaseqindica>1..508#632..834#1152..1349#1440..1511#1607..1702#1870..1949#2037..2115#2191..2434#2504..2697#2812..2917#3001..3087#3219..4048#ATGACGCGGAGGAGAAGCCTCGCCGGGGGTGCGGCGGCGGCTGTGGTGGTGCTCGCGGCGGCGGCGTCGGCGTTCCTGTCCCTGCTCGACGGCGCGGCGGCGCTGCACCTGTGCACGGACAGGCTGTTCAACGACACGCAGGGGAGGCACTCTGACGGGCTGCCGCACCTGAACCAGGCGGAGGAGGCGACGTGGATGGGCCTCCTGCCCCGCCGCGCCGGGCCCCGGGACGAGCTCGACTGGCTCGCGCTCTACCGGAGCATCACCCGCGGCGGCGGCGGCGAGCCGGCGGGGTTCCTCTCGCCGGCGTCGCTCCACGACGTCCGTGTCGACCCGTACGGCGCCAACATGTACTGGCAGGGGCAGCAGACCAACCTCGAGTACCTCCTCTACCTCGACCCCGACCGCCTGACATGGACGTTCCGGCAGCAAGCCAAGCTCCCCATCGTCGGCGAGCCCTACGGCGGCTGGGAGGCGCCGGACGGCCAGCTCCGCGGCCATTTCACAGGTCTGTATCACCGTATGCCATTCTTGATCTCATCTTGCGGCGATCAATTTTGTTCACCGTTTTTGTGGTCACTTCACTTCGATCGATCTCTACTCCATCTGAGGTGTTTGTGTTGATTTGCAGGTCACTACTTGAGCGCGGCGGCGCACATGTGGGCGAGCACGCACAACGACGCGCTGAGGGAGAAGATGACCAAAGTGGTGGACATCCTCTACTCTTGCCAGAAGAAGATGAACACGGGTTACCTCTCAGCCTACCCTGAATCCATGTTCGACGCGTATGATGAGCTGGCCGAGGCATGGTCGCCCTATTACACCATCCACAAGGTACATTGTGATGAAAACTTAGATCTGTTCTGTAATTACTCTGCATGATCTGATTCTGATTACATAAACAGAGTGGTGAACTTAGATCAGCTCTTTACTCTGCATGATCTGATTCTGATTACATTACATAGGGATGAAGTTAGATCAGTTCTTTACTCTGCATGCTCTGATTCTGATTACACTACATAGTGATGAACTTAGATCAGTTATTTAATTGCTCTGTATGCTCTGATTCTGATTACATAACTTGTCCATCTGGTGGTCTGTCATCTGGTGTTGTGTGTTGCTGTGGGTTGTGACTCTTGATGTTTTGACAGATCATGCAAGGCCTTCTTGATCAGTATACATTGGCTGGAAACCCGAAAGGTCTTGAGATTGTGGTGTGGATGACTGATTACTTCAGTACTCGTGTGAAGAAGTTGATACAGGAGTACAGCATTCAGAGGCACTGGGAAGCGATAAACGAGGAAACTGGTGGATTCAATGATGTTATGTATCAGCTTTATGCCATAACGGTAATTGCAATTCTGTTGCATCTAGTATTTGGTAATTTGTGTGGAAGATGTGTTTCTTACAAATTAAAGTCGTTCCTGTCTTTTGTGCAGAAAAACCAGAAGCATTTGACGATGGCACATCTTTTCGACAAACCGTGCTTCCTTGGACCACTTGGGCTGCATGTGAGAACTTGAGTTTCATTTATGGTATTTTGTTTTCTTTTGCGAATCGAGTCTTTTGCAGCAAAGACAGGTGATATCTTTTGTTTGCTTTTCAGGATGACGACATATCGGGATTGCATGTTAACACACATGTTCCTGTGATTGTTGGTGCACAAAAGAGATATGAAGTAGTTGGGGATCAACTTTACAAGGTAAACTGATAGTAATTTGGGATTTGCACCAAAAGTCCTCACCTTGATGGGCTTATAATTGTGCCCTACCATATCGGCTTACTCGTCAGGCAATAAAAAAATGATGCAGCATTTAAAACTTTTTTCAACTTGAGTTAGCTGACTTTGAAACAAAATATATGGCACAGGAAATTGCAACATTCTTCTTTGATGTTGTAAACTCCTCTCATACATTTGCAACAGGAGGCACATCTACCATGGAACACTGGTGAGTGATAATCCATAGCCATATCACCATTTTACTTTCTTAGGCTCTCTTACCATTGTCCCTACTTAAGTTCATCCTACACGTCAGGCACGATCCGAAGCGGCTAGTAGATGAGATCAAAATCAGCTCAAATGAGGAGACTTGCGCCACATACAACCTGCTTAAGGTGAGCCATCCCTTCCATCAAACGCGATAATTCTACAGAAGGAAGCTCTGAATTTGCCCCCGTCTACAATTGCAGGTCTCACGAAACCTGTTCAGATGGACGAAGGAAGGTAAATACACCGATCACTATGAGAGGCTACTTATCAATGGGATCATGGGCAACCAGAGGGGAAAAGAGCCTGGTGTGATGATCTATTTTCTTCCCATGGGCCCGGGACGATCCAAGAGCATCAGTGGCATGCCCACCTCTGGCCTACCCCCCAAGAACCCAGGGGGCTGGGGTAATGCAAATGCTACATTTTGGTGCTGCTATGGGACAGGTAATTCCTGAATATTTGTGCAAGTGATCTTCCATCCTTGTGTCTGAATCTTCTAATTTGCATTGGCAGGGATAGAGTCATTCTCAAAGTTAGGGGATTCCATCTACTTCTTGGAAGAGGGAGAAATCCCTGGGCTTTACATCATTCAGTACATACCAAGCACCTTTGATTGGAAAGCGGCAGGCCTGACTGTTAAGCAGCAGGCCAAACCACTGTCCTCAACAGATTCTCACTTTGAGGTTTCAATCTTCATTTCTTCAAAGGTAACTTAATTCTAAATCACATCTTCAGCCATGACGTAATTAAAGGTGACATATTTTTCCTTCTTAAAGAATGCTTGATACTTTGTTTTTTCTTCAATTTTCTCATATATGCAGGGAGATGCCCGACCGGCAAATGTGAATGTGAGGATCCCGTCATGGACATCCGTGGATGGAGCAATAGCAACTCTAAATGGCCAAAAACTCAACTTGACATCTGCAGGTAACTTCTGTTGTTGATTTGATGTGCTATTTCTTCTGCTCCCATGGGTGTGATTCCTGCCTCAATGTTTGTTTCATGTTCAGGCGATTTCCTCTCGGTGACGAAACTTTGGGGCGATGACACCTTATCTCTCAAATTCCCCATCACCTTAAGAACCGAGCCGATCAAAGGTATGAAATTTACACGATCAACATCTTTTTTGGCCCAAGTTAATGAAATTTATATGATCATCAGAACTCTTTTTCACGGCAAGTTAAAAGTCTCTGAAATATAGTCTGAAATGGTAGATGAAATTTTTCAGATGATCGGCCGGAGTATTCGTCCATCCAAGCGGTGCTGTTCGGGCCTCACCTCCTCGCCGGCCTGACGCACGGGAACCAGACCGTGAAAACCAGCAACGACTCCAACAGCGGCCTCACCCCCGGCGTCTGGGAGGTGAACGCCACCCACGCCGCCGCCGCCGTCGCCGGCTGGGTCACCCCGGTGTCGCAGTCGCTCAATTCGCAGCTCGTCACCCTCACGCAGCGCGACGGCGACGCGCAGGCGGCGGCGGCGTTCGTCCTGTCGGTGTCGATCGCCGACGGCGCGCTAACGATGCAGGAGTCCCCCGTCGCCGGGAGCGACGCGTGCGTACACGCCACTTTCCGGGCCTACCACTCCCCCTCCGGCGCCAGTGCCATCGACGCCGCCACCGGCAGGCTGCAGGGCCGCAACGTGGCGCTCGAGCCGTTCGACCGGCCGGGCATGGCCGTCACCGACGCGCTCAGCGTCGGCCGGCCGGGGCCGGCCACGCGGTTCAACGCCGTCGCCGGGCTGGACGGCCTCCCCGGCACGGTGTCCCTGGAGCTCGCCACCAGGCCGGGATGCTTCGTGGCAGCCCCCACCACGGCCTACCTCGCCGGCGCCAAGGCTCAGGTCAGCTGCCGGAAACCCACCGCCGCCGGCGGCGGCGAAGACGACGACGACACGGCGTTCCGCCGCGCCGCAAGCTTCACCCAGGCGGCACCTCTCCGTCTCTACCACCCGCTGAGCTTCTCGGCGACGGGCACCGACAGGAACTTCCTCCTGGAGCCATTGCAGAGCCTCCAGGACGAGTTCTACACCGTCTACTTCAACGTCCTCACCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020893