Os11g0557300

From RiceWiki
Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0557300| Description = BSD domain containing protein| Version = NM_001074623.2 GI:297612025 GeneID:4350721| Length = 4622 bp| Definition =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0557300

Description

BSD domain containing protein

Version

NM_001074623.2 GI:297612025 GeneID:4350721

Length

4622 bp

Definition

Oryza sativa Japonica Group Os11g0557300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22552076..22556697

Sequence Coding Region

22552465..22553103,22555912..22556099,22556180..22556645

Expression

GEO Profiles:Os11g0557300

Genome Context

<gbrowseImage1> name=NC_008404:22552076..22556697 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22552076..22556697 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtggctcgcgcgctctatcgccaactccctcctcgcccccgaggagccggacgacggcgaagacctccccccgtccgccgcctccgcctccgcctcggcatccgcgtccccgcctcgcggcgtccgcgaggacctctcggagctcaccgacgccctcgccaaccgcttccatggcctcgcctccttcctcgcgccgccgccccacgccggaggcgggagagggatcccgcgcgcgcctgacccggccgagatcgccggccggttccgcgccggcctcgcgcggctccccgggcgtcaggccgtcgcggatctcgccaagatcgcctcctcgcttcttccccccgaggcggcggaggccgaggcggccgggttcaccgaggaggcggtcgccttcgcgcgggacgccgccacgcggcccgagctctggctcgacttccccctcctccccgacgacgacgacgatttcgacatgaccgacgcgcagcaggaccacgcgctcgccgtcgagagcgtggcgccggagctggccgatctgcggatcgagctctgcccgagccacatgagcgagggatgcttctggaagatctacttcgtgctgctccatcccaagctcagcaaggacgacgccgacctcctctccaccccacagattttggaagctagaaagaagctatcacgcaatttgcaatctgagtcaaagccagacagcaacgaagacatggtagctgcttcttccagtaatatagatggtaatgtgccttctcctgtagaggttgtgggcatattaaagaatgaagatgattctgcaagggccacatccttcagcaacgtcaactatggcgcgcctcaaccagtaattctggaaatgcaatcagatgatacactcaatgactctggaggtcttcgcgcagatgacatcaccagcagtgtacctgtacaacttgtgccagtattgaaagatgctactgagttctcacaagccaggatggaagaaaggatccaagatttcactgcacaagatacagtagcaaatgaagagcctggacagttgtctgggataaaactagaggataattctgaagaacgacagaaacagccatcgaccactaacctcagtgagcaatcaagagttgccattcagaagaacagtaacgatgacgatgatgatgacgaggatgaatggttggaagaggaggagactggtggtgcagggaacacgatgattccaatagcagatgatgaagacgtgtcttttagtgatctggaggaagatgatgccacagcgtga</cdnaseq>

Protein Sequence

<aaseq>MAWLARSIANSLLAPEEPDDGEDLPPSAASASASASASPPRGVR EDLSELTDALANRFHGLASFLAPPPHAGGGRGIPRAPDPAEIAGRFRAGLARLPGRQA VADLAKIASSLLPPEAAEAEAAGFTEEAVAFARDAATRPELWLDFPLLPDDDDDFDMT DAQQDHALAVESVAPELADLRIELCPSHMSEGCFWKIYFVLLHPKLSKDDADLLSTPQ ILEARKKLSRNLQSESKPDSNEDMVAASSSNIDGNVPSPVEVVGILKNEDDSARATSF SNVNYGAPQPVILEMQSDDTLNDSGGLRADDITSSVPVQLVPVLKDATEFSQARMEER IQDFTAQDTVANEEPGQLSGIKLEDNSEERQKQPSTTNLSEQSRVAIQKNSNDDDDDD EDEWLEEEETGGAGNTMIPIADDEDVSFSDLEEDDATA</aaseq>

Gene Sequence

<dnaseqindica>3595..4233#599..786#53..518#acacaagcaaaccaattcccccttcgccgccgccgccgcctcgccgccggcaatggcgtggctcgcgcgctctatcgccaactccctcctcgcccccgaggagccggacgacggcgaagacctccccccgtccgccgcctccgcctccgcctcggcatccgcgtccccgcctcgcggcgtccgcgaggacctctcggagctcaccgacgccctcgccaaccgcttccatggcctcgcctccttcctcgcgccgccgccccacgccggaggcgggagagggatcccgcgcgcgcctgacccggccgagatcgccggccggttccgcgccggcctcgcgcggctccccgggcgtcaggccgtcgcggatctcgccaagatcgcctcctcgcttcttccccccgaggcggcggaggccgaggcggccgggttcaccgaggaggcggtcgccttcgcgcgggacgccgccacgcggcccgagctctggctcgacttccccctcctccccgacgacgacgacggttcgtgccatcgtgctccactcgctcgctccgccttgttaatggcgtttgcattgatccatggatgtggggaatcgcagatttcgacatgaccgacgcgcagcaggaccacgcgctcgccgtcgagagcgtggcgccggagctggccgatctgcggatcgagctctgcccgagccacatgagcgagggatgcttctggaagatctacttcgtgctgctccatcccaagctcagcaaggacgacgccgacctcctctccaccccacaggtagtcattcccctcctcctcctcctcctccaccacattgcctccacgaatccgaatcgggaaggattcctcctcttccaatccgattgggaatccatgtccatgtagccgactgaaatccccacttcccaactataaacctcacggcttcgcttgcccgggttggagaaacatagcaagagaaggaggagaaggagatgagagtcatggaggatgaggaatttctgcggctgtgtccgccgacacacccacggcgcaacgatgacgatgacgatgcccttccggcgacgtgcctacttgacttgctgacctacattgccgactgccgcaacgcgaccaccgccacttgcaggctcagctgcggcatggaggtgcaggtcaccatctgcgccgcgccaccgccgctcgtctcccatgtctgtgtatattgccctggctacgatcacaccgtctttacgtgtgtgcccaaggtcgtcgccacgcagggcgacgtccttgtcctctgcatcgcgctaggtcctcgcggcaccatctacaggcctagcaggagcaactactacctctaccaggttcaggctggctggccttcgctcaagttgctcccgcaccctggcccttgctttgatcctaatgatccctatgccccgttattcgatgaccacagtgttggcatcatacgctaccaaccccacatcgaccatcctgccttgtacgtcatccccgccctcactaacggatcagtgcctgggcgttacgacctccacctattacactcgaatgccgagagctggatcagcaaacggggcttgccacgtccacattcaatgtctcacggcgaccacagttttgccaaggtcatcactgttggaggagaagctggcaccataggctgggttgacctctggaagggcatcctcttctgtgacgtgctcaaggacaacccagtgttcctctatgtctcgctcccaccccccctcatggcaaccaggaagctgcgaggctgcccaagaaatactcgtgacgttagtgtcatcaaaggtcttatcaggtatgttgagctgcagattcacatcaagccaggctcgtttacccgaggcaactacatttccaatggctggacagttgccacatggagcaggatcagctctaatccttttgaggattggcaccagaactgtaaacttgatgcttctcaggtctcttttgaaaataacccagtgcattatgaaaagctgcctgagctgctagacgaccaaggcatacctcagctaaccatggtgcggctccacacaggtcatcctgttctcagcatgcacgaccatgacattgtttacctcatgactaaggtcaactacttagatgacaaagcatgggttcttgccattgacatgaggaacagcacattacaaggtgttgctgaattcaatgcggaaagagtgatcgccttaaggtacgcctttacgcaaagtgggatctctgaatatctgaacatgcttccaggtataaagggaaaccgaaaaagataaaggatgttgttgctggaaccctcttgcaaggaggagtgtaaaatccgcatggtacataatatggtggatggtatgaatgttgattaatggataaggtaaaggtctgaaggctgggatgaaggcaagtttgctctcctcaatgttcgtatcaagaaagagagctaaagctcgcaagcagctcccctcgtatgctgtatccatcactgcctaccatgctggcttgctgcttggagccgccttcctcacctcttgcctcgtgtccttgtctgcaccttggtcagattttgtcagcgccagagcttggaggagccgccttccttgccacatggaactgcctgcgttgtatccttgtctatgctcggagtgggagagttcacttgaacctgcgctggagctctgaggaggtggatcttgccattcgctcccgttggggcttactggtcactgcgtgagaatacatgaaggtccaggctctagtttggggcaattaatctggatagatatggtccagactccagatggataaggtagactattaggtgcgggattatgttagtgttctgagtaggcattcttgctaatgtgggaattgtagctgtacgacatggaaaatgtagtcccaaatgtatgggaattttgcatcattttcaataagttatgaatgagtgagattcagtgaggtactttttcccttcagttgaatctgtattactgctttgagaagatgttctctagaagcatagtgtaatcttgtcaaaatatcgagtctgggatttttaggcagttgtaaaatatgattgcatcctcacaaaccatgattgtctaatcgtagaaatatcatataatgcacaaatgatatgttccaactttgcaggtccgtgcccaggtggaacttctcacctatctagtctgtgttgcattatgctaatcaactcttatatttcatataagtctatcaagaaatgcatcctccaacattctcttcctctttttgatggtgtgatcctgagttctgctataagttatgaataaagttagcgactatttcactgttaccgctgttggatgaattacttttggcctaattacaaagttttgtaatggtttctctggaaattcctagttgctatttgataataagtaacgggctttttcattctttttctttccctgttgcttgatggttttgctttctcacaaatcaagacaatcagttgctgccattccatttcattgattgatagtaccatacttactcttactgctgattgacttgaaacagattttggaagctagaaagaagctatcacgcaatttgcaatctgagtcaaagccagacagcaacgaagacatggtagctgcttcttccagtaatatagatggtaatgtgccttctcctgtagaggttgtgggcatattaaagaatgaagatgattctgcaagggccacatccttcagcaacgtcaactatggcgcgcctcaaccagtaattctggaaatgcaatcagatgatacactcaatgactctggaggtcttcgcgcagatgacatcaccagcagtgtacctgtacaacttgtgccagtattgaaagatgctactgagttctcacaagccaggatggaagaaaggatccaagatttcactgcacaagatacagtagcaaatgaagagcctggacagttgtctgggataaaactagaggataattctgaagaacgacagaaacagccatcgaccactaacctcagtgagcaatcaagagttgccattcagaagaacagtaacgatgacgatgatgatgacgaggatgaatggttggaagaggaggagactggtggtgcagggaacacgatgattccaatagcagatgatgaagacgtgtcttttagtgatctggaggaagatgatgccacagcgtgacaacgttagctggtttggatactctagcttcctgcatctgatgttctggttccatgacacggcaaaatacaatgggcttggctgagttttcgactacatgctgctgttgcaaaatttacctcctctcttctctgtacgaagtgaatgcaaatatcagctttgcaacttgctatgcaagaccccattttcttctctttttttggggaagttactgaagtgagccagctagtggtgtgattagcagttgtacagtgtgtagagactagatcatctgaggaatttgatcaatattatctgattcctccaacgtgtatcaaaatgatgaaattcaattcgtcctctttcagtgaaagaaatatacagtccatgtttatattattatacatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0557300, RefSeq:Os11g0557300