BGIOSGA020909

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Revision as of 12:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020909| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020909, complete gene.| tag = P0556B0...")
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Gene Name

BGIOSGA020909

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020909, complete gene.

LocusTag

P0556B08.19-1

Ensembl Transcript ID

BGIOSGA020909-TA

Ensembl Protein ID

BGIOSGA020909-PA

Length

3986

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25295259..25299244

Sequence Coding Region

25299017..25299244,25298240..25298324,25297467..25297607,25297243..25297356,25297001..25297098
,25296771..25296850,25296567..25296672,25296346..25296473,25296014..25296239
,25295425..25295481,25295259..25295339

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25295259..25299244 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25295259..25299244 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGCAAAGGACTCCAAGCCCTCATACAGCTATTCTTCTTCATATGATTATGGGAATTCATCATCGGGATATAACTCGAGATACCCTGCATACCCTGCAAATGCATCTTCCAGTCAGAACACAAGGTATGCTCCTTCTATGGAGAACTATGTGCAGCCAGAAACGCATGCCAGGTTGCAGAGGAAGTACTCGAGGATTGGTGATGACTACCGCTCTCTGAATCAAGTGACTGAAGCTTTGGCACAAGCAGGTCTTGAATCATCAAATCTTATTGTAGGCATTGATTTTACAAAGAGCAATGAATGGACAGGTAAACTTTCCTTCAATCGCCGATGTCTGCATGATATTGGAAACACTCCAAATCCATATGAGCAAGCAATATCTATTATTGGAAGGACACTTTCAGCTTTTGATGAAGATAATTTGATTCCTTGCTTTGGATTTGGTGACGCATCAACTCATGATCAGGAGGTATTCAGCTTTTATCCAGAGAACCGCCCATGCAACGGATTTGAAGAGGCATTAGAAAGATACAGAGAAATTGTTCCGACTCTTCGATTAGCTGGACCAACATCTTTTGCCCCGATGATTGAAACAGCAATTGGTATTGTAGACAGCACTGGTGGTCAGTATCATGTTCTTCTGATAATAGCCGATGGACAGGTTACTCGAAGTGTTGATACACAGTCTGGGCAGTTAAGCCCGCAGGAGCGTGATACGATTGATGCTATAGTAAAAGCTAGCCAGTTCCCCTTGTCTATTGTTCTTGTTGGGGTGGGTGATGGACCATGGGACATGATGCATCAGTTTGATGACAATATACCTGCTCGCTCATTTGACAATTTCCAGTTTGTGAATTTCACGGACATCATGTCAAAGAGCATAGCAGCTGACAGGAAGGAGGCAGAATTTGCACTATCCGCCTTGATGGAAATCCCAACACAATACAAGGCAACACTTGATCTCCAACTTCTAGGCCGTCGCCAAAGAATACAGCCAAGAATTCCTCTGCCGCCACCTATGAGGAATGCTTATTCGAGGTCTACTAGCTTTGACCAACATTCTGGTGTTTATTCACGATCTAGTAGCTTCGGCCCACAAACAAGTGGCTTTCAGCAATCTGAAAGCTTCAAACAGAGACAGCCTGTGGCTACCACTGCACCTGACACTTATACCTCGGAAAGTTCTTTAGAAGGAAGACTTTTGTGCGCTATCTGTATGGATAAATCAAAGGATCTTGCATTTGGATGTGGACATCAGACCTGTTATGAATGCGGGAAGAATTTGGTGCGCTGCCCTATGTGCCAGCAGCATATAACCACAAGGATCAGGCTGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MGAKDSKPSYSYSSSYDYGNSSSGYNSRYPAYPANASSSQNTRYAPSMENYVQPETHARLQRKYSRIGDDYRSLNQVTEALAQAGLESSNLIVGIDFTKSNEWTGKLSFNRRCLHDIGNTPNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYREIVPTLRLAGPTSFAPMIETAIGIVDSTGGQYHVLLIIADGQVTRSVDTQSGQLSPQERDTIDAIVKASQFPLSIVLVGVGDGPWDMMHQFDDNIPARSFDNFQFVNFTDIMSKSIAADRKEAEFALSALMEIPTQYKATLDLQLLGRRQRIQPRIPLPPPMRNAYSRSTSFDQHSGVYSRSSSFGPQTSGFQQSESFKQRQPVATTAPDTYTSESSLEGRLLCAICMDKSKDLAFGCGHQTCYECGKNLVRCPMCQQHITTRIRLY</aaseq>

Gene Sequence

<dnaseqindica>1..228#921..1005#1638..1778#1889..2002#2147..2244#2395..2474#2573..2678#2772..2899#3006..3231#3764..3820#3906..3986#ATGGGGGCAAAGGACTCCAAGCCCTCATACAGCTATTCTTCTTCATATGATTATGGGAATTCATCATCGGGATATAACTCGAGATACCCTGCATACCCTGCAAATGCATCTTCCAGTCAGAACACAAGGTATGCTCCTTCTATGGAGAACTATGTGCAGCCAGAAACGCATGCCAGGTTGCAGAGGAAGTACTCGAGGATTGGTGATGACTACCGCTCTCTGAATCAAGTATGTTTTTGATGACATGACCTTGTTTAACCCATGAATTTTGATATTTGCTTTGCGGGCGTTTGGTATGCGTGCTATCGATTACTAGTAGCTTAGTTGAATGGCATCAGTATCATTCATCTTTGATGATATGGCATAGGGAAATGTTTGAATAAGCTATCCTTTTCTAGGATATTTTCGAGGAGGGTTCCAAACAAGAGTTGTATTCTCTTATGGAAACCACTATATATATTGCATTAACAAAGAAACCACTATAGATTCTCAATGGAGCTTTCTTTGACTATGGTATTCATCTCAGTCAGTTTTTTGTACGCTGGAATTCACCCTTTTTAGTACACACTTTTAAATGATTTATAAGATATCCAGCTGCTATTTATTTTCCAGTACATTTTCAGTTAATGGCTTGCCATCTTTAATCATATATGTGTTGTTTGAGCCAAAGACTATAACAAGCTTTCCATTTCCTGTTATGTCTCCTACAAAAGATAATTCCTTGCTATAATATTTATGTGCTGTTGATGTGCTTATCATTGTGTTCAATTTATGTATTTTTCTTAGTTTCATTTCCTTCATAGTGCACCAGAGTATACGTACTACTTTACTAGAGTCTTGAACAATCTCTTCCTTTTGAGTACTGTGAACTTGAGATTGGAAGTACACGTTTTCATTTTTATCGATATGTACTGTTACAGGTGACTGAAGCTTTGGCACAAGCAGGTCTTGAATCATCAAATCTTATTGTAGGCATTGATTTTACAAAGAGCAATGAATGGACAGGTTAACAGACCACTTCTTGTTTTGAATTCTGTTTCTTTATATTTGCTTTGTGCTGTGCTGGTAGCCTATTACTTGCGAATTAGTAGTGTTATTATATACATCTTGATTTACCTATTATTAGGACAAACATCCTTTTCTACCTTAGTTGCGTATGATGCAAATGAGAAATGGCATGTCAACTTCTCTTAATTCTTTGTTATAAATGAGCTCTCACTAGGGCTGCTGTCTGGAAGGAGGTTGGACTTTCTTGAAAAAAGTTTATTGAGGGAGTTAGCTACTCCTAATAAGCTGGTTATTTTTCTGTATCTGAAGTGCCTGTGATGCAAATGGCATGTCAACTTCTCTTAATTCTTTGTTATAAACCCCTAATAAGCTGGTTATTTTTCTGTATCTGAAGTTTATGTGAACTACCTGTTATCTTTTGACATAAGGAGTGAACCTGATTCCGTAACTTCACAACAAATGCAATGTGCAATCTTTTGCCAAACAAAACCATTTAAAGTAAAGAAATGTGAAATGGGGCAATTATGCATGTAGCAAGGATGCCTCTCATGTTGCTTGCATATCCTACAGTCATGCTATGTCACAAATCATAGCACTCTCATTTAACCTGCTGAGCTTTTCTCCATTAGGTAAACTTTCCTTCAATCGCCGATGTCTGCATGATATTGGAAACACTCCAAATCCATATGAGCAAGCAATATCTATTATTGGAAGGACACTTTCAGCTTTTGATGAAGATAATTTGATTCCTTGCTTTGGATTTGGTGACGGTAAGTTCATTGTTCCCATTTTCCATTTTGATCACTTGGTGTGTGCTCAGTAGCATATTTAAAGAACAATGCTGATCTAATGCCTCCTTTGTGGCTTTGTCTACTGGCAGCATCAACTCATGATCAGGAGGTATTCAGCTTTTATCCAGAGAACCGCCCATGCAACGGATTTGAAGAGGCATTAGAAAGATACAGAGAAATTGTTCCGACTCTTCGATTAGCTGGTTCGTTTCAGTAATTTCACAATTTAGATGTTTATTCTTCCTTTATTTTTTTAAAGAAGGATCTTGAATTTAGCTGGTTATATATAAGATTGCAGTAGTAACTACAGATCTTCAGAAAAATAATGTATGCAAAAATTGCAACAGGACCAACATCTTTTGCCCCGATGATTGAAACAGCAATTGGTATTGTAGACAGCACTGGTGGTCAGTATCATGTTCTTCTGATAATAGCCGATGGACAGGTCTGTCACCATTTTCTCTTGTTTTATCCCTTTTCTTTATTTCTTGTCTTTCTAAGTAATTGTGATCAGCAGAACTCTTCTCTAGATTATAGTTGATTATTTTTTTTGTTCAAATCATATTTTTACAGTGGCTAAAACTTCTGCTAACAGGTTACTCGAAGTGTTGATACACAGTCTGGGCAGTTAAGCCCGCAGGAGCGTGATACGATTGATGCTATAGTAAAAGCTAGGTACTTGATCGAGTCCCTAATTTAATATCGGTATATTCTGCCCAAATCAAATGTCCCGAATCACACGTGTTAACATTTTTTTCGAAATAAATTTCCAGCCAGTTCCCCTTGTCTATTGTTCTTGTTGGGGTGGGTGATGGACCATGGGACATGATGCATCAGTTTGATGACAATATACCTGCTCGCTCATTTGACAATTTCCAGGTGACTGTTCTACATTTAATTTCCAGTCATTGGCTTATTTTTGTGTGGTTTTCACAATAATAGAGACATGTAAAAATGTTTGCTTTCATGCAGTTTGTGAATTTCACGGACATCATGTCAAAGAGCATAGCAGCTGACAGGAAGGAGGCAGAATTTGCACTATCCGCCTTGATGGAAATCCCAACACAATACAAGGCAACACTTGATCTCCAACTTCTAGGGTAATCCATGTTTTCCCAGGACTGCACTGGGTCAAATGTACTAGAGTTTGTGCTTGCAGCAATTGTATCCATTTGAACATTTTCTTCACGTTTTCTTTCGTTTCAGCCGTCGCCAAAGAATACAGCCAAGAATTCCTCTGCCGCCACCTATGAGGAATGCTTATTCGAGGTCTACTAGCTTTGACCAACATTCTGGTGTTTATTCACGATCTAGTAGCTTCGGCCCACAAACAAGTGGCTTTCAGCAATCTGAAAGCTTCAAACAGAGACAGCCTGTGGCTACCACTGCACCTGACACTTATACCTCGGAAAGTTCTTTAGAAGGAAGACTTGTAAGTATTTTTGTTTATATTCACACCATGTTGAATAGATAAAGTTTAAGATATATACTGCAACACTGTAGCATTGGTAAAATAAAGTTTAAGCTATATACTGCAAGACTACATTGGTGTCATTATCGTACACCACCAACAAATAGTCTCCCTTTTATTTTGTTCGTACTGTGGCATTTCGGGAGGCTAATTGAAACAGGGGAAGTTGCATTGCATTGCTCTATCTGTTCTGACCACCCTGCCTGCGTTCATTTGGCTTATTACTTATTTCACGGATGCCCTTTATGAAAAAAAAAATATCGTGCCTTCAAATGGCCCATTTGATCTTGATCTGATAACTACATTATGCTGAATATTGCTATTGCATTTCACATTCTTATGTCATTTGGGCATACTGTTAATCCGCAGATCATGGAAAGTTCCTACACCTCTAGTGTTAAGTTTTTATGTACCATCAAATTTCGTGCTAAACCCTGAGAATCTTACTGGATTACAAACTAAATGCAGCTTTTTTTTTTGTGTGTGGTTTCAGTTGTGCGCTATCTGTATGGATAAATCAAAGGATCTTGCATTTGGATGTGGACATCAGGTGCAGAAAATTTCCCCTTATTGTTCTCTATTTCTACATAATTTCTTGTTATAAATGGCAGCATGCATGATAAAATGATTCGCAGACCTGTTATGAATGCGGGAAGAATTTGGTGCGCTGCCCTATGTGCCAGCAGCATATAACCACAAGGATCAGGCTGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020909

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020909&oldid=43434"