BGIOSGA020914

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Revision as of 12:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020914| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020914, complete gene.| tag = OsI_236...")
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Gene Name

BGIOSGA020914

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020914, complete gene.

LocusTag

OsI_23645

Ensembl Transcript ID

BGIOSGA020914-TA

Ensembl Protein ID

BGIOSGA020914-PA

Length

3762

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25153494..25157255

Sequence Coding Region

25157031..25157255,25156756..25156947,25156567..25156626,25155832..25155903,25155607..25155717
,25155267..25155452,25153494..25153802

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25153494..25157255 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25153494..25157255 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGAAGTTGCTGAGATTGCTGATGCTATGGGTACGGTTGGCATTGATAATGGGGCAAGCCGGAAGTTGTTGTCGAACGAGAGTTTAGAGGAGCGAGGAGAAGAGCATGATGTGCAGGCTGATGGGGCGCACTCGGGTGAGAGTGAGGTGATCAACCCCGCTGAGGAGGTGGGTGGAGAAGCCACCTCACAGCCAGAAGACGTAAAGCCGCGTGTTTCCAAGGGAAGCCAAAGTCATTCCCCTAAGGTTACTACCAAATCTCAGCGCCAGAGCCCACGAAGTGGAGATAAGAGTCAAGCTAGGAAAAACAGTCCCGGTTCTACTTATCCCAAGGCACCCATTGCACGAGTGTCTGACCCAGATTTGGTTGATAGCTCTTCATGCAATGATGGTGCTGATATTAAGAAAGTAAAGAAGGCTGAAAAGAGCAGTTCCGTCCAGTGCCAGGGCGAGTCAATCACTGGAGGACTCAAATTCTACTCAAAGCTTGAGGAGAAGATTCATGCACAGGAATTGGAGAAAAGCAACATGCAGGCGAAATCAAAGGAAACAGAAGAAGCTGAACTCAAAAAGCTAAGGAAGAGTTTGAATTTTAGGGCAAATCCAATGCCCAGCTTTTATAAGGAACCACCTCCTCCCAAGGTTGAGTTGAAAAAGTTATATGTACAAGTACACAGCAGGGGTAGGCCTCCAACTCCAAAATTTAACTCCAGCTGGGTCTGGAGTGGAGTTGTGGAGCAGCCTGAACCATGCTCCTCCTCCCTAGTTCATTTTCTTATAGCACTCCAGCCCACTCCGCTTCCTTTTGGGGTGCAGCTGAAACCAGCTCCAGCTCCAAGAGAGATCCCTACCACCAGAGCTAGATCACCAAAGCTTGGCCGCTCAAAGAACACAAGCTCAGTAAGCACTGAAGAAAGTACCGTTCCTTCAAGCCGCCCAGCTCGTCTGAGCCTGGATGAAAGGGCCTCCCAGAATGGTGTGAAGAAGGTGCCTGCTGCGAACACGCTGAGGAAGCCCCAACGGAAGTCTCTCCCCAAACTGCCATCAGAGCAAACAGTCACTGAACAGGTAGATAACAACACGTCGGCTACAGATCCCGTTCGGGAGCTGATCCGTGCCCAAGTTACCCCGGATGATCAATTTGGTGGATAG</cdnaseq>

Protein Sequence

<aaseq>MDEVAEIADAMGTVGIDNGASRKLLSNESLEERGEEHDVQADGAHSGESEVINPAEEVGGEATSQPEDVKPRVSKGSQSHSPKVTTKSQRQSPRSGDKSQARKNSPGSTYPKAPIARVSDPDLVDSSSCNDGADIKKVKKAEKSSSVQCQGESITGGLKFYSKLEEKIHAQELEKSNMQAKSKETEEAELKKLRKSLNFRANPMPSFYKEPPPPKVELKKLYVQVHSRGRPPTPKFNSSWVWSGVVEQPEPCSSSLVHFLIALQPTPLPFGVQLKPAPAPREIPTTRARSPKLGRSKNTSSVSTEESTVPSSRPARLSLDERASQNGVKKVPAANTLRKPQRKSLPKLPSEQTVTEQVDNNTSATDPVRELIRAQVTPDDQFGG</aaseq>

Gene Sequence

<dnaseqindica>1..225#309..500#630..689#1353..1424#1539..1649#1804..1989#3454..3762#ATGGATGAAGTTGCTGAGATTGCTGATGCTATGGGTACGGTTGGCATTGATAATGGGGCAAGCCGGAAGTTGTTGTCGAACGAGAGTTTAGAGGAGCGAGGAGAAGAGCATGATGTGCAGGCTGATGGGGCGCACTCGGGTGAGAGTGAGGTGATCAACCCCGCTGAGGAGGTGGGTGGAGAAGCCACCTCACAGCCAGAAGACGTAAAGCCGCGTGTTTCCAAGGTAAAGAGTTGACACATTTTGCAGTTGCTGAGGTCTTCTATGAAGGTTTTTGGTGACAGTTATGGTAATTTTGTGTTTTGTAGGGAAGCCAAAGTCATTCCCCTAAGGTTACTACCAAATCTCAGCGCCAGAGCCCACGAAGTGGAGATAAGAGTCAAGCTAGGAAAAACAGTCCCGGTTCTACTTATCCCAAGGCACCCATTGCACGAGTGTCTGACCCAGATTTGGTTGATAGCTCTTCATGCAATGATGGTGCTGATATTAAGAAAGTAAAGGTCTTTTCCATTATGTTGTATTATATAGTGCTGAAATGCTTAGATCCTGCTATGTGCAGTTTTAGGAGACATCTTTATGCCCAATAATTTAATATAACATGAAATTGCTTTTTTGATGTTTTGATCCAGAAGGCTGAAAAGAGCAGTTCCGTCCAGTGCCAGGGCGAGTCAATCACTGGAGGACTCAAAGTATGCTGTTGTTTGTTGACAGTATTTTTGTGGCTTAGCTGTTTCTGTTTTCTCAAGAAAAAATAACTGTTTGGTGATGGTCTACATATCCAATTAAGCTATTCTGCTTTAACCCATTGATTAAGAAAAAGCAGGGCATTTTTTTTGAGTGAAAGCGACTAAGCAAGGGGGCCTTATGATTGTTGCATTTCTGATGTTCTGCCCCCTCAAATTATGCCAAAAGAATTTTCTTGCTTACTATTCTCTTATTTTTGCAACCATAAGCTTTTCCATCTTGTGAGACCTCAGTCAGTTTAAGCTTGTTTGAATACTCTTTGCTTATAGGCTTATTTTTTTTTGTGAACCATTCTACCAACTACCAATTGAAGCTCATATTGATAGTGTTTCTTGCATTGACACATTCCTCATCAAACCCAGGGAAAAGAAGAAAACTCAGAAAACATCAAACCAATGTTCTGTCAAAAATGATGAAGAAGAGCCAAACTGTGAAAAAGTAAAGCCTCAAAGGGTTGTGCGCACTCCTGCGTACGGATTTGCATTCAAATGTGATGAGAGAGCTGAAAAAAGAAGAGAGGTAAACTTGTTACTAGATACATTTGCACCGAATTTAGTCTCATACATATGGACGTCATTCCTTTCCTTACACATTCTGCAATCAAATAGTTCTACTCAAAGCTTGAGGAGAAGATTCATGCACAGGAATTGGAGAAAAGCAACATGCAGGCGAAATCAAAGGTTCATACGTTATGTCTCTTTTCATGGAAATGAACAATCAATCAGTTGTAATATTCAAGTCAACCAGACATTTTCATAAAATCTTTGCATTGTTTGTTTCTTTATACCATGCAGGAAACAGAAGAAGCTGAACTCAAAAAGCTAAGGAAGAGTTTGAATTTTAGGGCAAATCCAATGCCCAGCTTTTATAAGGAACCACCTCCTCCCAAGGTTGAGTTGAAAAAGGTAATTCTCTCGCTTGAGATATACATGTAAGGAAAGGAAAATTTAAGATTATAGACCATTTACCTACTGATTCACAGTAGGACCTTTGGCAGTCTTCTTTTATTTTAGTTACACAATCTATACTTGCTAAAACCAGTTCCTGTGCTGCCTGTAGTTATATGTACAAGTACACAGCAGGGGTAGGCCTCCAACTCCAAAATTTAACTCCAGCTGGGTCTGGAGTGGAGTTGTGGAGCAGCCTGAACCATGCTCCTCCTCCCTAGTTCATTTTCTTATAGCACTCCAGCCCACTCCGCTTCCTTTTGGGGTGCAGCTGAAACCAGCTCCAGCTCCAAGAGAGGTAGAGGTGGAGCTAGAGCTGGAGCTCTGCCAAACAGGCCCTACTTTCACACATTCACATATAGTCATGAATGGCTCTACATTGTTCAAAATTTTGGCTAACTTAATTACTTTAGGTAGCCAATTTCATGGCTGTTTCCTATAAGTAGCTAGCAAGCTGTTAACTTTTCATAGAGGTGATCAGTTCTGTTGATCAGCTGTTCAGGATATTTTATTTACTTGTATTATTATGTAGCTGTTGGCCCATCTATTGCTACGAATTTGAACTCAGTCATGTTTCTTTGATGAGTTAATTTTTAGATGGTTTCTTTGATGAGTTTGTTGCAAGTTTACCATCTGCAATTTGCTGATCTTTGAAAAAGATAAGTCCTTTCCTGAGAAAAAGACATCCATACCAACTTAAGTTAATTCTTGGCTTGCTCCCACCAGATGGTTGGTTCTTTGCTGAGCATTGGAACTTTTGCTTAGCAACATGTCAAATATTTATACTTACTAGAAAAAAATGCCCGTGCGTTGCAACGGGTGAAAGCTCTTTTAATCTTATTACTGTTATATGGTTTAGTTAAGGTGAAATTCACTGTGACAATTCGCTTGGATGCATTTTTTTTAAAAAAAATCATGAGCTGCGGTTAGGAGTCTGATCGTCTAAAATTAGCATGCGAGTTTTCTTAAAGAGATTTCTTATACAACTCTTCTTGGGTTTCCAAAAACGAACGAGCTTTAAAACCGACTCAAATACGGACATGTATTTCCAAAAACAAACAAACTTAAAAACCGACTCATATATGGATGACGTACCAAAGTACCGGTAAAAACATCTTCAATTTATAATAGTAGAGAGTAGAGATTTACATAATTTTTTTAATAAGACAAATAATCAAATTTAATGGTTAAAGTCATCTGCCTCAAAATATTTATGACAAGATGGAGTAATGTATATGTATATTATGCAATAGAGAAGAGAAGTGATTTAACTGGCTAGCGATCACATGTTTCCTGCACGATTGATTTGTGGGGTAGCTTTTGCAAGAGCAAAAATATCAGCTAGCAAAAGCAGGTCCAATTTTAATCGTTTAAATCCAAATATGTGGGACCACTGCAACGCTCGGTTTCTGGTTGAAAGTCGGAACCCCATCCGGTATCTTTGCTGCGACCCTGCTTTGGGACGGACATGAGTCGGACTCTGCACTGCTCGTGCAGCTTCACGCGTCCAGGGCTCCAGGCTATGCTTCGCAGGGACATGTAAGACCAATAGAATTCGAAGACAGCTGACGGACGGAAGTAATTTTTATAATAGGTAAAAATATATAGGTAAAGATTAGGATAAGATACATCTAGAAAACATAAATGGATTCGGATGACGTACCAAAATCTTGACAAAAACATCTTCAATTTTTATAATAGTAGAGATGTGCATTTTCTGTTCTTCTGATAAATGATACTTATTTACCGTCATTCATTGCAGATCCCTACCACCAGAGCTAGATCACCAAAGCTTGGCCGCTCAAAGAACACAAGCTCAGTAAGCACTGAAGAAAGTACCGTTCCTTCAAGCCGCCCAGCTCGTCTGAGCCTGGATGAAAGGGCCTCCCAGAATGGTGTGAAGAAGGTGCCTGCTGCGAACACGCTGAGGAAGCCCCAACGGAAGTCTCTCCCCAAACTGCCATCAGAGCAAACAGTCACTGAACAGGTAGATAACAACACGTCGGCTACAGATCCCGTTCGGGAGCTGATCCGTGCCCAAGTTACCCCGGATGATCAATTTGGTGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020914

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020914&oldid=43439"