BGIOSGA020924

From RiceWiki
Revision as of 12:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020924| Description = Japonica Group Os06g0603600 (Os06g0603600) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA020924, complete gene....")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020924

Description

Japonica Group Os06g0603600 (Os06g0603600) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA020924, complete gene.

LocusTag

NM_001064548.1

Ensembl Transcript ID

BGIOSGA020924-TA

Ensembl Protein ID

BGIOSGA020924-PA

Length

4034

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24780755..24784788

Sequence Coding Region

24784492..24784788,24784258..24784390,24780755..24781212

Genome Context

<gbrowseImage1> name=IndicaChromosome06:24780755..24784788 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:24780755..24784788 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTTTGGGAAGAGCCTGAGTAGCCAGATCGTGGAGACGCTCCCGGAGTGGCGGGACAAGTTCTTGTCGTACAAGGATCTCAAGAAGCGGCTCAAGCTGATTGGTGGGGGTGGGGGTGGGGAGGAGAGGCAGGCGAAGCGGGCACGCGTTGCAGCGGATGGCGGCGAGGAGGAGGCCGCCGCCGCGGCGATGACGCCCGAGGAGGCGGGCTTCATGCGGCTCCTGGAGGCCGAGCTCGACAAGTTCAACTCCTTCTTCGTCGAGAAGGAGGAGGAGTACATCATCCGCCAGAAGGAGCTGCAGGACAGGGTGGCGAGGGCGGCGGGGAGGGAGTCGAAGGAGGAGCTGATGCGGGTGCGCAAGGAGATCGTCGACTTCCATGGCGAGATGGTGCTGCTCGAGAACTACAGCGCCCTCAACTACACCGGATTAGTTAAGATTCTCAAGAAGTATGACAAGAGGACTGGGGCTCTGATCCGTCTGCCTTTCATCCAGAAAGTGCTACAGCAGCCTTTCTTCACCACTGACCTCCTGTACAAGCTTGTGAAGCAGTGTGAGGCCATGCTGGACCAGCTTCTACCATCAAACGAACTGCCTGTATCGAGTGAAGATGGGAGAGGCGATAGCACTAACGAGGACAAGCCTTCGAATCCCAGTTCATCCTTGGTTAATGGTGGCACTATTCCAGAGTTAGATGAGATCGAGTACATGGAAAGCATGTATATGAAGGGCACGGTCGCGGCGCTTAGGTCTCTGAAGGAGATCCGAAGCGGAAGCTCTACTGTTAGTGCATTCTCATTACCACCTCTCCAGGGCGACAGTTCGCCAGAGGAGCAGCAGGAACTGTGGAATAAGATTCCGGTGATTGAGCAGGCCGCCAAATGA</cdnaseq>

Protein Sequence

<aaseq>MKFGKSLSSQIVETLPEWRDKFLSYKDLKKRLKLIGGGGGGEERQAKRARVAADGGEEEAAAAAMTPEEAGFMRLLEAELDKFNSFFVEKEEEYIIRQKELQDRVARAAGRESKEELMRVRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKQCEAMLDQLLPSNELPVSSEDGRGDSTNEDKPSNPSSSLVNGGTIPELDEIEYMESMYMKGTVAALRSLKEIRSGSSTVSAFSLPPLQGDSSPEEQQELWNKIPVIEQAAK</aaseq>

Gene Sequence

<dnaseqindica>1..297#399..531#3577..4034#ATGAAGTTTGGGAAGAGCCTGAGTAGCCAGATCGTGGAGACGCTCCCGGAGTGGCGGGACAAGTTCTTGTCGTACAAGGATCTCAAGAAGCGGCTCAAGCTGATTGGTGGGGGTGGGGGTGGGGAGGAGAGGCAGGCGAAGCGGGCACGCGTTGCAGCGGATGGCGGCGAGGAGGAGGCCGCCGCCGCGGCGATGACGCCCGAGGAGGCGGGCTTCATGCGGCTCCTGGAGGCCGAGCTCGACAAGTTCAACTCCTTCTTCGTCGAGAAGGAGGAGGAGTACATCATCCGCCAGAAGGTGCGGCGGTGATCGATCGCCATTTGTGCTTCGGTTCGAATCTTCTTCTTCTTCTCGAGTTTCTTGGTTCTGATTTGGGAAATCGACGCTGTGTGTGTCAGGAGCTGCAGGACAGGGTGGCGAGGGCGGCGGGGAGGGAGTCGAAGGAGGAGCTGATGCGGGTGCGCAAGGAGATCGTCGACTTCCATGGCGAGATGGTGCTGCTCGAGAACTACAGCGCCCTCAACTACACCGGTGAGTGTCCCAGTCCACGCACTTCCCCACCCGCCGCATCGCAACACCCGTAGTTTTCAGTTTTCACGTCTTTCACTAATTATATTATTGCAAAGGGTTCGTTAGCTGTTGCTTATGTTGTTTGTTAACTCTTCTTGGAATGTTCTGTGAATTGGGGAGGTAGTAATAAGAGAGGTTGGAAAAACTGGTTAACATAGTAGTTTAGTATCCTTATTAGAATTTTTTTTGATTGGGGAGGTAGTAAGAGAGGTAGAAAAAAATTGGTTAATATAGTAGTTTATTAGTATTCTCAGAAAGGTAATTTAGCACGCATCATAGAGCAGGCAGGAGTAATGGAAGTTTCCTGAACATAGGTCAAGAAATAGGCGACTTATTGTGGTTGTGGGCAGCTATGGTTTCGCATGTCCGCTACGGAGCACTCATGTCGCTGTCAAGGAGAATGGATCCTTGTATGGCAATTCAGTGCGCACACGTTTTTGCTCTCTATTGATGAATGGATACTTGAGGTTGGGCTCAGCAGCTAATGTTGGGGGCACTGTATATAAACAGTTTGTTTTCTCGTGCGAGACAAGCAATTTATAGTATGGCCACATGAGTGCTAACATTGTTTATGGTGGAGCACTCTGTTCCTTTCTGCTGCAATTTGAAATGGTAACAGTGTGTCATGCATCCTTCTATCGTGAACAGATTTTCCTTTGACTCGCTATAAGAAGGTACTCCCTCCATCCCAAGATATAAGTATTTCTAGCTATGAATGTGGACAACTGTGTCCAGATTCATAGCCAAAAGTTGCTATATTTTGGGTCGGAGGTAGTATATAACAATTGTAAACAAATAGGTCAAAAAATTTATCCTTTTCAACAGGCTGTAATACAGTTCGTCACCAACCAAATGGTGCATAGAAGTTTCTACAAGAAATATTTGACTAATAATTGACTTGGTATCAGATATTATCTTGGCAATATTTTTCACTAAAAATACAGTCTGATTCAGGGTTCACATGATGATGCAGTAGTGTGTAGTATAGTATAGTGACCTTGCCCTCTACTGCAGTGTTCCATGGTAGTCTGGTAGATTATCTGCTTCCTTACCTGTCCACTGGCAGCATATGCAGTGCATATGCAAAGTAATGATGTACAACTGTACTGCTTTGCTATTTTTCGGTTGGCCTTTGTTATGCCTTAATGCTGAGTGGTTGATTTTCCTCTTTATCAATGTGAGATTGTGAGTGGCTTCTAATATCTGGAAATTTTCATTCCTAGCCTGGGGGTTACAGGTTAATCATACAACTCAATTAAATCTAGGTCGGTTGCTGTTGGCAGTTGGGACGAAAATTACTCACTTGAATATGATGTTAGAGCATCATTTCTATCATAAGCTCCATAGTTGTTTTAGAAATATTGATTTAGTAAGCAGGGCAGCGTATGCCTCCCCTCACCAAATCCAAAATTAAATTCACTATGCATCATTTCAAAGATTGCCTGAAGTTCCGTAGATGCATTAATAATACTATATGCACAATTTGCAAAAAGTTGGGTGTACAGTCATCTGCAGTTAGATAAATAAATTAACTTGTTCTAAATTCCCAGGAAGCATTCACGCCTGAAATACTGTAGTAGACAAGTTTGCAGGCTAATTTTTGCAATATGTTATAAACTATTTCAAAGACATTTATAGTTTTTATTTTTAGTATGGCGCAAAATACATATTTGGTAAACGGGGGCACATGCTTCATTGCCAAATATTTTTCATCAGTTGACGAGTCTTCTGATTAAAAGTCATGCCTAACGAAACAAGAAAGTGCAATTCATGTTACGTTTGTGATTTGCGTTCCAGCTATTGAAAATAAAAGAAATTAGTTTTGCATATCATCTAAAGATATGGTATTGCTCAACAGAAATTTGTGTAGCTAATTTCATGATCTTCATTAGTTGACTCTTTTATGCTTAGCTGAGATGTGATTGATGGTCCTAACTTTGCATGCTATTCGTCATCTATTTCCTAGTGCTTCTTTAGTGGACTACTTTTTAAAGTCAGTTTTTTGCTAGCTTCAATGAACTTGAGGCTAATGAGTACCTTGGTTACTGTGTTATTATGTGCTTGTGGACAATGGTTTCGGTGGACGTACTGTGAACCAGTGACCTGTGACCACTCTTTGTATCAGCATCTTGCTTTTTTCTATTTTTCCTTTGCAAGATGCAAGTTGATGGTGTCACAGACCTATATGGCTATATTGGGCCAGGTTAACACACACTAATTTGGGGAGTCGACTTTTAGAATGTGATCACATTCTAAAGATGAGGATGTCACACAAAAAGTAAATTTGTTGTTTTGCATCATGCAAGCTTAGTATGTTTTGCTCAACCAACAGAAAAGAATGCAAGTTGCATGCTTCTTATATGCCTGAAGCCCTGAACTGGAATGTGTTACTGTTAATAACCATCATTGGTGCTTTGCAACTGCACAATACATTTCTGCTGCCATTTTGCTCATATCATGCTGGTCTATTTCGTATGCTTATGCGAATAAGAAACTATATTAGTGTTGTACAACTGTCTGAAAGTTTTCTGGTTATCATTTGCAATATGAAATGTTATCCTATCTCAACAAATTGACTAGCATCTCCTTTATGGCAATGTGGTACCCTTTACACATCACTACCATGCTAGCTTTCCTGATATGAAAATTTACTGGACCATGCCTCACGAGAATTCAGGTTCATTAGCTAGGGATGTGACAAGTTACAAATGGTTTTGGTGCCTCAGACAGACAGATGCCACAGCCTGTAAGCCATACAAGGGCGTATTTTCTATTTCCTGTCAGTTTGGGCAGATATCACCTAAACTAAAATGTTTAGTCTGATTGAACCACTAGCAATAGCTCCTGTCAGTTATCCCTGTTTATTCTCTTGAGGGAAAACTCTTTAAGAAAAGTTGTGATATTGGAAGTGGATTGGATGCTGTTTGAAATTTGGAAGATGTAACTCTTGTACTTTGTTTTAGATTTTCACCAGTTGATACTTACGTTCCATGTTGCTGTTTACAGGATTAGTTAAGATTCTCAAGAAGTATGACAAGAGGACTGGGGCTCTGATCCGTCTGCCTTTCATCCAGAAAGTGCTACAGCAGCCTTTCTTCACCACTGACCTCCTGTACAAGCTTGTGAAGCAGTGTGAGGCCATGCTGGACCAGCTTCTACCATCAAACGAACTGCCTGTATCGAGTGAAGATGGGAGAGGCGATAGCACTAACGAGGACAAGCCTTCGAATCCCAGTTCATCCTTGGTTAATGGTGGCACTATTCCAGAGTTAGATGAGATCGAGTACATGGAAAGCATGTATATGAAGGGCACGGTCGCGGCGCTTAGGTCTCTGAAGGAGATCCGAAGCGGAAGCTCTACTGTTAGTGCATTCTCATTACCACCTCTCCAGGGCGACAGTTCGCCAGAGGAGCAGCAGGAACTGTGGAATAAGATTCCGGTGATTGAGCAGGCCGCCAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020924