BGIOSGA020932

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Revision as of 12:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020932| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020932, complete gene.| tag = P0486H1...")
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Gene Name

BGIOSGA020932

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020932, complete gene.

LocusTag

P0486H12.1-1

Ensembl Transcript ID

BGIOSGA020932-TA

Ensembl Protein ID

BGIOSGA020932-PA

Length

5761

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24609696..24615456

Sequence Coding Region

24615061..24615456,24614071..24614851,24613271..24613344,24612740..24612805,24612046..24612092
,24611646..24611718,24610098..24610421,24609696..24609833

Genome Context

<gbrowseImage1> name=IndicaChromosome06:24609696..24615456 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:24609696..24615456 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCTATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATTCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCTGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTGCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGGAGTCTGCCACATGGTTTGCTAAATTACAGAGGGATCTTCAATCCGAATATGACCTGCAAAGACTTTGTAAGAGGCCTTATTTCAAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAAGAAAATACCGTGTGTTGTTTGATGTGCTCTGCATTGGGTATCAACATCATGAAACGGAATCATCCACAGAAGCAGAGCAGAGAATCAGAGAGTACAAACGGATCATCAGGCGACGCAGACACTTTCAGGTTTCCACTCAAGGCAAGCAACATGTACTACAATGTTCTCCATTTCCGCATAAAAAAGTCCAAAAACGATTTCAAGGACAGCAGAGGCCGGCCATCCATCCTGTCCTGGCAAGATTCTGCAAGAAAGAATCAATGAAGCCAAGCCAAGCCACTGCTTTTATCAGCTTATGGGGCTCGTGGATTCTCCACGCCAAGTGCATGGGCATGAGAGATGGAGCCATGGCTGACGACGACGACGACGACGACGACAACGATGATCCTGAGCACTGGAACAAAAGCGTACCAGACGCTGCCTCTGCCTGCATTGATGCTGCGAGATCGATGATGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MKLVKGSKVEVLQEAEVPLGSWRGAEIVLGNGQSFYVRYDPSPVDSCAAVERVQRRLIRPCPPRDDSVCWAVGDILEAFDSYSWKIAEMVRVLGKDFYLVRLLGSSLELRTHASELRLRKHWKDGKWTVLQKDSTKCFGGSFRGQPKSGNLGSNFGKQRQLYCAMDNNLLLKNQKALEGDKSRGMKRKSSAITHPTQCSEVTRGMKRLQTPHRDGRHAALVAGVSPRLAEKVDAVDSPCLMLGEKYMHASLNKRKNGVHTTNLAGVNVDTENKFCPLTSAYPSDTESISSSVGSCSPSSSPCSSRHFYSAYQTGDICSRTDGAEAAVSERETSQHDKIIPKEDTHLLELHAYRATMLALYVCGSISWEQEALLTNLRLTLNISTDEHLAELRRPKSEACKASFCRSMSMEESATWFAKLQRDLQSEYDLQRLCKRPYFKMLHKDSGGSHAKRVSWLHAFDKFPFQKKHYMVHLVFSDEQRKYRVLFDVLCIGYQHHETESSTEAEQRIREYKRIIRRRRHFQVSTQGKQHVLQCSPFPHKKVQKRFQGQQRPAIHPVLARFCKKESMKPSQATAFISLWGSWILHAKCMGMRDGAMADDDDDDDDNDDPEHWNKSVPDAASACIDAARSMMQ</aaseq>

Gene Sequence

<dnaseqindica>1..396#606..1386#2113..2186#2652..2717#3365..3411#3739..3811#5036..5359#5624..5761#ATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGTAATGGTCCATTCCTTCAAATTCATGATATGGAACTATTCATGATTAATTTTTTTGACTGAAAAGTAGAATAAGCTACTTTATTTCCTTAAGTTGAATAAATCAGCTGGCAGATTGCCACTGTCTTATCTTCAGCAAATCTGTTATTGAAAATTCGATTTTAATGTATCGATAAAACATCCTAATGACTTGTCTCCAATTGATTTCAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCTATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATTCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCTGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTGCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGTATGGTTTCCTCGGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCATTAAGTATGAGGTATTTGAGTAGTTGATGTTCTGTATTACCTGTTAAAAGAGTTACCTAGTCAGATCATTTTTGTACCATAGACCTTCCAAGAAACATGAAATTTTGCTACATTTTCTCAAACAATTACTGTTCTTCACTTATTCACACTGAAGTTTGTAGCTTTACATTGCTTATATGTTGCTTGTGATCATCTGATTGAATTTTACAGTACTATGATCAAACTCTGCTTTCATTTCAGTGGTACAATATGAAAGTGAGGTCTACGTTAGTGAAGTCCAGTTGTATATATTTGAGCCTTTATGCTGCCAATGATTTTACTTACCCGGGCTACTTGATCCATTGTTTTTTTATTATTCAACATTGTTAGATGTCATGAACATTTGTGCAGGACCTATCATGGTGAGAACCCCATTATTAAGAAAAAAACTGTTGAGCAGCGAGTAATATTCGTATGTTATGTTCAGATGCCATTTTCTTGTCTAGATAGTTAACTGACCTTACAAATTGCAAATGCATCTTTGTACTCGGGAAATTACCACTCAAGGATTGTTCTTGGCAAAGTCTGCAATGAGAAAAGTTGGAAAATGGAAATCTGATACTTATCATGAATTTTCCAGGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGGAGTCTGCCACATGGTTTGCTGTATGTTAAATGTGGCAACATTCCATCGAACTTCTGTTGGTACCTTGTTTGTTTTTGTTATTCCTTTTGCTTTAGGATTATCTTTTCTGCTGCCTTTTCTTGTGATTGGCCACTAAATTTCTCGAGAACATTATGAAGTGCATAATTTCCATAAGTTTACACCACATTCATAGAAAATAAACAAAAGTACATGGTAGGCACATCTGGATCAATTACCACTAAAAAAAGGAAGATGAACTTATTTTCATATTGACGTATTTTGATATATTTTTTTCTCTTTAGAATGTGAGGCAACTGAGAGGAGTACCTGCAGATTTTGCATGACATGGTAAATAGTGTTTACAATTGGTAAGTTTAAATTTGTAGGTCAGTAATGATAATACAATTATAAACATCGTAGTTCTAACCATGTGATTTTTAACACCTATTTGCAATATGCACATTACCCTTTGTTACTAAAAACAGAAATTACAGAGGGATCTTCAATCCGAATATGACCTGCAAAGACTTTGTAAGAGGCCTTATTTCAAGGTATATATGGTGACTACTGAATTAATGTATGCACCATGGCATTGTTGATCACTGAGGCATCTAGCTGGCTTGTTGAATTCCATCACAAGTCACTCCTTAGTGCATGACTTATTATAGTTGACTCACATGGTTGCTTAGTGTTGTTTGAATGAGTTTTACCATCTAATATTTCTACATATGGATGCACAAATATTGTATTAGACATATGGATGCTTCCCACAGTGCTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGATGCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAAGTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTGTCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGCTAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACCTTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACTCGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATTCAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGTGTCAATCATTATTTGTTTTTAATTGCAAGCATTTCAAGTGGCTTGTTTGGCAGCAAAGTGTTACAATTTATTAGAGTACAATTAATAATGTCCTGAATTAATGATCTAAGTACGAGACACGCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGCATGCAGCTGGTATACTTTGATGGCTCCTAGTTGCAATTCTTTAAGTTGTAGTACAGTGTAATATGCCATTACTTGTTCCGGATGTACTGAAAGATGCAAAGTTGCTAGATCTGCATTGCTACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAAGCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATGCATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATACAGACAAATGTCTGTTCAAATAAAGAGTCACTCTTTTATTCTCTCACTTGTGGATAATACTGCATATCAAAGTTTTAGGCAGGTCTGATAGCCCACCCGGATTGGGCCATCAGGCCTAATGGTAGCGCAACTGGGCTGTTCATTGCTTTAGTTTTTACCTTTTAGGAAAAAGTACATTGAAAGGCCTCTTGTCACCGCATTACAAAATCGTCCTTACGACGCATGTGGGCCCCCACATAAGCCTCATCATTTTTTTAGTTACTATTTAGTGAAACTGACGTGTGGGTCTAACTTTTTTTTTTAATTTTTTTTCGGATCAAATCGCTACTTAAGCGCCACATCGAATGGAGACCTAGTCAATTGAGCCACATAGGCGCCACGTTAGTTAAAACTAGGGATAATACCACCAAGGAACCTAATTCGCACTGGTTCTGTAAGTTGAGGGATGCGTTATATTCGGTTTTGCGGTTTAAGGACGATTTTGTAATTCGGTGACAAGATAAGGGACCTCCGGTGTACTTTTTGCTACTTTTTACTGCTGAAATTATCCTGTCGATATCGATTGGATTGAAAATTCAGAATTAGGCCCTGAATACATCATATTCCAGCATTCTAATTGTTCTCAAATGAATGTTTTTTTCTATGTTTTTTATGTGGCATCTTCCAATTCTTTGGCGACGTGTATCCTTATAGATACTTCCAAAAACATACTACCTACATCCCTCAATGTTTGCGAAGGTTCATCTCGTTCTGACATAGTGGTGAAATCTGAAACTCTGTCATCAGGTTTGAAGTTTTGAACTCACCGAGTGATTTCAGAGGCTTTTTCTTAGAGGAAGTTTGTAAAGCATGGTCTTCGTTGGTTAGATCGCCTCCAAAATTTCCCAGTCATAATCTTTAGACTATTAATAGAAAAAAAATATTTGTGTTTCTACAGAATATTTTCGCCTCGTGAAGCACATGAGAAAGAGGGCCAATAATGTTCCATTTCTGAAGAATGGCAAGTTTCTTCAAACAAAAAAAAAAAACTTCTTTCCGGTTAAGTGATGATGATCTAGTTGACGCATTGGTTCAGAGAAAATACCGTGTGTTGTTTGATGTGCTCTGCATTGGGTATCAACATCATGAAACGGAATCATCCACAGAAGCAGAGCAGAGAATCAGAGAGTACAAACGGATCATCAGGCGACGCAGACACTTTCAGGTTTCCACTCAAGGCAAGCAACATGTACTACAATGTTCTCCATTTCCGCATAAAAAAGTCCAAAAACGATTTCAAGGACAGCAGAGGCCGGCCATCCATCCTGTCCTGGCAAGATTCTGCAAGAAAGAATCAATGAAGCCAAGCCAAGCCACTGCTTTTATCAGCTTATGGGGCTCGTGGATTCTCCACGCCAAGGTGTTCGAGCAAATGCCCCAACGAACGAGGCTCTGGGGCCATGCCCATGCCAGGCGGGCGCGCGACAGCAGCTCGACCGGCGACCGGCTGGCCTTCCCCCCCGGGGACCAGCGGCGACGGCGACGGCGAGACGACGACCCACCCTGCAATCGATGCCTCCCCCTGTACGCCGCTGCCGCGACCAGCTCAACGAACACTGGCAGTCAGCCACTGCTGCTGCTGCTGCTGCTGTCGCTGTAGTGAATGTTTATGCTGCATTTGCAGTGCATGGGCATGAGAGATGGAGCCATGGCTGACGACGACGACGACGACGACGACAACGATGATCCTGAGCACTGGAACAAAAGCGTACCAGACGCTGCCTCTGCCTGCATTGATGCTGCGAGATCGATGATGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020932