BGIOSGA020933

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Revision as of 12:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020933| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020933, complete gene.| tag = OsI_236...")
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Gene Name

BGIOSGA020933

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020933, complete gene.

LocusTag

OsI_23600

Ensembl Transcript ID

BGIOSGA020933-TA

Ensembl Protein ID

BGIOSGA020933-PA

Length

3690

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24587818..24591507

Sequence Coding Region

24591383..24591507,24590400..24590498,24589760..24589832,24588211..24588534,24587818..24587946

Genome Context

<gbrowseImage1> name=IndicaChromosome06:24587818..24591507 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:24587818..24591507 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGACAAGCAATCCTTACATACGAGCCCACATTTTTCCACTTCACCATACCGTCCAAGTCACGCTAAGATCGAGCATTGGAGATTTTGGTTTCTTACGCCCCCAAAAACCGGACGAGCAAACTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTGTCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAAGAAAATACCGTGTGTTGTTTGATGTGCTCTGCATTGGGTATCAACATCATGAAACGGAATCATCCACAGAAGCAGAGCAGAGAATCAGAGAGTACAAACGGATCATCAGGCGACGCAGACACTTTCAGGTTTCCACTCAAGGCAAGCAACATGTACTACAATGTTCTCCATTTCCGCATAAAAAAGTCCAAAAACGATTTCAAGGACAGCAGAGGCCGGCCATCCATCCTGTCCTGGCAAGATTCAGCAAGAAAGAATCAATGAAGCCAAGCCAAGCCACTGCTTTTATCAGCTTATGGGGCTCGTGGATTCTCCACGCCAAGTGCATGGGCATGAGAGATGGAGCCATGGCTGACGACGACGACGACGACGATGATCCTGAGCACTGGAACAAAAGCGTACCAGACGCTGCCTCTGCCTGCATTGATGCTGCGAGATCGATGATGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSTSNPYIRAHIFPLHHTVQVTLRSSIGDFGFLRPQKPDEQTMKSRENFQKITGGVTLSTTTTCVTGGQYLQELTLHAFDKFPFQKKHYMVHLVFSDEQRKYRVLFDVLCIGYQHHETESSTEAEQRIREYKRIIRRRRHFQVSTQGKQHVLQCSPFPHKKVQKRFQGQQRPAIHPVLARFSKKESMKPSQATAFISLWGSWILHAKCMGMRDGAMADDDDDDDDPEHWNKSVPDAASACIDAARSMMQ</aaseq>

Gene Sequence

<dnaseqindica>1..125#1010..1108#1676..1748#2974..3297#3562..3690#ATGTCGACAAGCAATCCTTACATACGAGCCCACATTTTTCCACTTCACCATACCGTCCAAGTCACGCTAAGATCGAGCATTGGAGATTTTGGTTTCTTACGCCCCCAAAAACCGGACGAGCAAACGTAAGCATCAACAAACCTCTTAAAATTAATTACTTCTCGATGAAAACTTATCGCCCACTACTCACTTTTGCTGTGAATTAAATGTGCATCTGTTCATGTGTCCAAAGCAACATGTTTTTGAGGGAGTTCGTTGAATCGATCGATCGATTATATGTGGGCAGGTTTTAAGAAAGGATTAAATGTGAAGGCCAGTACAGAGAATGATTCGATTTTCAGTTTGGACAGGTAATGGCCGTTGCAGGTAGAAGCTGACTAGCCATCGACGAGGCAGGCAGAGCCACATGCAGCTCGAGCTGGCGAGGCAACCGTCGCATGCATGTTCGTTCTAATAGCTTCCATCCGCTTCGTATACAAATTTTGACAATTTGACCCTTTGTAAAAACTATTTTTATAAATAAATCGTCGCCAAAACTTATTTTAAAACTGACCCTTTTGTTCAGCGTCAATCGTGTGGCGCTGAACTTGCGTTGGCACGCTGACTTAACCTCCCATCCGTGGTGGCCCGGCAATTCAACGCCAAATAGCATGGCGCTGAAATGTACATTGGCACGCTGACTTAACCTCCTATCCACGGTGGCACGGTATTCAGCGCTAGTTGACGTGGCGCTGAGGTGTCTAAGTTCAGCGCCACACGATTTGACGCTGAAAAAAGGATCATTTTTGAAATAAGTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAGACATATGGATGCTTCCCACAGTGCTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGATGCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAAGTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTGTCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGCTAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACCTTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACTCGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATTCAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGTGTCAATCATTATTTGTTTTTAATTGCAAGCATTTCAAGTGGCTTGTTTGGCAGCAAAGTGTTACAATTTATTAGAGTACAATTAATAATGTCCTGAATTAATGATCTAAGTACGAGACACGCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGCATGCAGCTGGTATACTTTGATGGCTCCTAGTTGCAATTCTTTAAGTTGTAGTACAGTGTAATATGCCATTACTTGTTCCGGATGTACTGAAAGATGCAAAGTTGCTAGATCTGCATTGCTACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAAGCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATGCATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATACAGACAAATGTCTGTTCAAATAAAGAGTCACTCTTTTTATTCTCTCACTTGTGGATAATACTGCATATCAAAGTTTTAGGCAGGTCTGATAGCCCACCCGGATTGGGCCATCAGGCCTAATGGTAGCGCAACTGGGCTGTTCATTGCTTTAGTTTTTACCTTTTAGGAAAAAGTACATTGAAAGGCCTCTTGTCACCGCATTACAAAATCGTCCTTACGACGCATGTGGGCCCCCACATAAGCCTCATCATTTTTTTAGTTACTATTTAGTGAAACTGACGTGTGAGTCTAACTTTTTTTTTATTTTTTTTCGGATCAAATCGCTACTTAAGCGCCACATCGGATAGAGACCTAGTCAATTGAGCCACATAGGCGCCACGTTAGTTAAAACCAGGGATAATACCACCAAGGAATCTAATTCGCACTGGTTCTGTAAGTTGAGGGATGCGTTATATTCGGTTTTGCGGTTTAAGGATGATTTTGTAATTCGGTGACAAGATAAGGGACCTCCGGTGTACTTTTTGCTACTTTTTACTGCTGAAATTATCCTGTCGATATCGATTGGATTGAAAATTCAGAATTAGGCCCTGAATACATCATATTCCAGCATTCTAATTGTTCTCAAATGAATGTTTTTTTCTATGTTTTTTATGTGGCATCTTCCAATTCTTTGGCGACGTGTATCCTTCTAGATACTTCCAAAAACATACTACCTACATCCCTCAATGTTTGCGAAGGTTCATCTCGTTCTGACATAGTGGTGAAATCTGAAACTCTGTCATCAGGTTTGAAGTTTTGAACTCACCGAGTGATTTCAGAGGCTTTTTCTTAGAGGAAGTTTGTAAAGCATGGTCTTCGTTGGTTAGCTCGCCTCCAAAATTTCCCAGTCATAATCTTTAGACTATTAATAGAAAAAAAATATTTGTGTTACTACAGAATATTTTCGCCTCGTGAAGAACATGAGAAAGAGGGCCAATAATGTTCCATTTCTGAAGAATGGCAAGTTTCTTCAAACAAAAAAAAAAAAAACTTCTTTCCGGTTAAGTGATGATGATCTAGTTGACGCATTGGTTCAGAGAAAATACCGTGTGTTGTTTGATGTGCTCTGCATTGGGTATCAACATCATGAAACGGAATCATCCACAGAAGCAGAGCAGAGAATCAGAGAGTACAAACGGATCATCAGGCGACGCAGACACTTTCAGGTTTCCACTCAAGGCAAGCAACATGTACTACAATGTTCTCCATTTCCGCATAAAAAAGTCCAAAAACGATTTCAAGGACAGCAGAGGCCGGCCATCCATCCTGTCCTGGCAAGATTCAGCAAGAAAGAATCAATGAAGCCAAGCCAAGCCACTGCTTTTATCAGCTTATGGGGCTCGTGGATTCTCCACGCCAAGGTGTTCGAGCAAATGCCCCAACGAACGAGGCTCTGGGGCCATGCCCATGCCAGGCGGGCGCGCGACAGCAGCTCGACCGGCGACCGGCTGGCCTTCCCCCCCGGGGACCAGCGGCGAAGGCGACGGCGAGACGACGACCCACCCTGCAATCGATGCCTCCCCCTGTACGCCGCTGCCGCGACCAGCTCAACGAACACTGGCAGTCAGCCACTGCTGCTGCTGCTGCTGCTGTCGCTGTAGTGAATGTTTATGCTGCATTTGCAGTGCATGGGCATGAGAGATGGAGCCATGGCTGACGACGACGACGACGACGATGATCCTGAGCACTGGAACAAAAGCGTACCAGACGCTGCCTCTGCCTGCATTGATGCTGCGAGATCGATGATGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020933