BGIOSGA020941

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Revision as of 12:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020941| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020941, complete gene.| tag = OsJ_218...")
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Gene Name

BGIOSGA020941

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020941, complete gene.

LocusTag

OsJ_21863

Ensembl Transcript ID

BGIOSGA020941-TA

Ensembl Protein ID

BGIOSGA020941-PA

Length

4913

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24338873..24343785

Sequence Coding Region

24342896..24343785,24342583..24342703,24340004..24340063,24338873..24339901

Genome Context

<gbrowseImage1> name=IndicaChromosome06:24338873..24343785 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:24338873..24343785 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTACTGAAGAACTCGCTTCAAAGGAACTTTCAGACTGGCGGTTGGCTAAGGCTGAAGAGCTTGCAAAGATGGTGGTTCTTCCTAGTAAAGAAGTGGATGTTAGACGCTTGGTGAGGAAAACACACAAAGGAGAATTTCAAGTTGAGGTGGAAGAAACTGACGGTATCTCTGTGGAGGTTGGAATTGGGGGTGATTTGCTTTCGCATGTTCCATCAAGACCTACTGAAGGTCAAACCAAAACCGATGATAAAAGTGTACACACGGAAGAAAAAGAATCAGACAATAGTGAGCAAGATGGAGTTATCGTGACAGGCGGCAATAACATGCCAAGCAATTTAGAACATACAGAAAATGAGAAAACTGATCTGATGCAGGAACTGATGGTAGATGACCTGAAAGATACAGAGAATCTTCCACCAATTATGTCACTGGACGAATTCATGGAGACCCTTGATTCTGAACCACCTTTCGAAGATGACTCCACTCAAACTGTGAAAGATGATCCTAATTCTATTGAGAAAACTGACATTTCATTGAAATCGGAAGATTCTTCCAAAAATGTGGATAGTGCTTCTGCATCAGATTCTCAACTTGATCCGCAAACATTATCTCCTCAAGATAAGTTTGAGTCCAAGTTACAGTCACCCAAAAAAGGCGCAGGCTCAATTTTGTTTCCAGTTGAACAAATAAAGGAAGATCTGTTAGTCAAATCCTCCCCTGAAAAGGCCAATGCTGAAAACATTGATACTGGCAGTCAGTCGATCCCTGAATCTATCACGGATTGTAAATCAGCTCCTGATGCTTTGCTGACACATGACAGTGTATGGGAGGGAACAATTCAACTTTCCTTGTCATCACTCACAAATGTTGTTGTGATCTTCAAAAGTGGTGAAAAGACATCCACAAACGAGTGGCGCCATTTCCTTGATATCAAGGGAAGAGTCAGGCTCAGTGCTTTTCAAGAATTTCTTGAACAACTTCCTAAATCCAGGAGCCGTGCTATAATGTTAACTGAGTTGCGTTGGAAGGAGGGCTCTCTTGAGAGTGGGCGCCAGCATCTCTTGCAGACCATTGACTCATATATTGCAGACGAGAGAGTAGGACTAGTGAAGCCTGCAGATGGAGTGGAGCTTTACCTCTGCCCTTCTCAAGGGAAGGCAGCACAGATACTTGCAGAGCACCTACCCAAGGAGCACTCGAGCAGCTTAACCGTGACAGGAACATCAGCTATTGGAGTCGTCGTGTGGCGGAGGCCCCATGTTTCACCTAGGATACCCGCCAGGAACGATGGCTCCAGAAACCAATCCATCTCGAGGAAGCAGCATGCCGTGATTGCCAGTGCAGTGCCCTTGTCTTCCAAGCCTACCAATGAGCGTCAGCACCACGGTCAGGATGTTGTAACTGATGATGTTCCTCCGGGCTTTGGCCCTGGTGTTGTTAGGGAAGACGATGACCTACCTGAATACGATTTTGTTACCGTCCCAAACGCAGCTGCCAACGTAGTACCATCACGACAAGCACACAGGAGCCAGCAGCAGCATTCTCAGGCCGCGTCCCGCCGCCCGGTAGACCATGTGAGGGAGATGGTTCGCAAGTATGGTAGCAGATCCGCTGCCGCAGCCCAACCCTGGGAGGAGGATGATGACGATGATGACATACCAGAATGGGATCCAAACCAAAGCAATCTGAATCTCCAGCAAACACGGCATGCTATTCCACAGCCACCGTTGCCTCCACCCGGACCTGTTCATCAGCAAATGCACGCGTATCATCAGCAGCATCAGCAACAGCAGCAGCATTACCAATCCATTCAGCAGTATCACGCAACACAGGAATCGCAGAACACCTTGTCCCAGGCTTACTACGTCCAGTCCCACTCACAGCAGCATTCCGTGCCCGTGCAGCAGCTGACTCATTTGCAGCCTGGCTGGCCGACCACCGCCCAGTGGCTGGCCGCCGGCGCCGCCGGCGCCGCGCATTCCGGCTTGCCGGCGAACAACGTCGTGCAGCAGTACTGCACTTCCGCGACGCCTGACGGTAGTGGCCAAGGCTACGCTACTGGGAACCAAGGCTCCATGCCTTGGAACCTACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MTTEELASKELSDWRLAKAEELAKMVVLPSKEVDVRRLVRKTHKGEFQVEVEETDGISVEVGIGGDLLSHVPSRPTEGQTKTDDKSVHTEEKESDNSEQDGVIVTGGNNMPSNLEHTENEKTDLMQELMVDDLKDTENLPPIMSLDEFMETLDSEPPFEDDSTQTVKDDPNSIEKTDISLKSEDSSKNVDSASASDSQLDPQTLSPQDKFESKLQSPKKGAGSILFPVEQIKEDLLVKSSPEKANAENIDTGSQSIPESITDCKSAPDALLTHDSVWEGTIQLSLSSLTNVVVIFKSGEKTSTNEWRHFLDIKGRVRLSAFQEFLEQLPKSRSRAIMLTELRWKEGSLESGRQHLLQTIDSYIADERVGLVKPADGVELYLCPSQGKAAQILAEHLPKEHSSSLTVTGTSAIGVVVWRRPHVSPRIPARNDGSRNQSISRKQHAVIASAVPLSSKPTNERQHHGQDVVTDDVPPGFGPGVVREDDDLPEYDFVTVPNAAANVVPSRQAHRSQQQHSQAASRRPVDHVREMVRKYGSRSAAAAQPWEEDDDDDDIPEWDPNQSNLNLQQTRHAIPQPPLPPPGPVHQQMHAYHQQHQQQQQHYQSIQQYHATQESQNTLSQAYYVQSHSQQHSVPVQQLTHLQPGWPTTAQWLAAGAAGAAHSGLPANNVVQQYCTSATPDGSGQGYATGNQGSMPWNLQ</aaseq>

Gene Sequence

<dnaseqindica>1..890#1083..1203#3723..3782#3885..4913#ATGACTACTGAAGAACTCGCTTCAAAGGAACTTTCAGACTGGCGGTTGGCTAAGGCTGAAGAGCTTGCAAAGATGGTGGTTCTTCCTAGTAAAGAAGTGGATGTTAGACGCTTGGTGAGGAAAACACACAAAGGAGAATTTCAAGTTGAGGTGGAAGAAACTGACGGTATCTCTGTGGAGGTTGGAATTGGGGGTGATTTGCTTTCGCATGTTCCATCAAGACCTACTGAAGGTCAAACCAAAACCGATGATAAAAGTGTACACACGGAAGAAAAAGAATCAGACAATAGTGAGCAAGATGGAGTTATCGTGACAGGCGGCAATAACATGCCAAGCAATTTAGAACATACAGAAAATGAGAAAACTGATCTGATGCAGGAACTGATGGTAGATGACCTGAAAGATACAGAGAATCTTCCACCAATTATGTCACTGGACGAATTCATGGAGACCCTTGATTCTGAACCACCTTTCGAAGATGACTCCACTCAAACTGTGAAAGATGATCCTAATTCTATTGAGAAAACTGACATTTCATTGAAATCGGAAGATTCTTCCAAAAATGTGGATAGTGCTTCTGCATCAGATTCTCAACTTGATCCGCAAACATTATCTCCTCAAGATAAGTTTGAGTCCAAGTTACAGTCACCCAAAAAAGGCGCAGGCTCAATTTTGTTTCCAGTTGAACAAATAAAGGAAGATCTGTTAGTCAAATCCTCCCCTGAAAAGGCCAATGCTGAAAACATTGATACTGGCAGTCAGTCGATCCCTGAATCTATCACGGATTGTAAATCAGCTCCTGATGCTTTGCTGACACATGACAGTGTATGGGAGGGAACAATTCAACTTTCCTTGTCATCACTCACAAATGTTGTTGTGATCTTCAAAAGGTTTGTTTCATCCGCAGTTCTGCACTGCTTATCTCTCTTGTATATACAATTCACTATTGAAAGTACTTCTCTTGCTAGTTTCTATATCTTGAGCACAATACATGGTACCATTTTATAGAACAGTGCACAACTTGACAAATTAATATTTCAGTTATATATCCTCAGTCGATTATTGTTTTGTCTGTTCTGTAGTGGTGAAAAGACATCCACAAACGAGTGGCGCCATTTCCTTGATATCAAGGGAAGAGTCAGGCTCAGTGCTTTTCAAGAATTTCTTGAACAACTTCCTAAATCCAGGAGCCGTGCTATAATGGTAATAGTTATTTCTCATTTGCTATTCTCAGTTGGATGACTATATTTTTTAATTAAAATTGGCAATTACCACAGTATGGAAATGTGAAATACATCGATGTTGTACAGTTGTACCTATTGACTTGCTAGCAGTAGCATCTACTGCTTCTTCTGAATGATTGATTGTAAGATGCTACGGAAACACATTTTTGTTTTGTAAGATAATCTTTGTTGTTAACGTTAGGCATTTGCATAAATATTCCGAACTCCGTGTTCAGGGGATTCCATAAATCTAATGATGGTAGCCATTCCCTTAAAAGAAATACTGGGTCAACATGACATGCTGTGGCAATTCCTTTCCTTTTTTTTTTTTTTGCAGAGTGTTATTCAATGTCACTGTTGTTTTCTGGTTGTGTTTTAATTGAGTTCTACACATTGCATTGAAGTGCACTGCAGATATAGTGCTATACCTTCAGTGGAATGGACTGTCGCCTCTGTTGTCCTTACAGCAAATTGATTCCTTATGGGACTCGGTACACAAACCTAGCAAAAACAAGTTGCGCACATGGATTTGCCTATGCAAATTGCCCTCGCAGATCAACAGAAGAAAGCCACGAAAATAACTAGTATCCTGAGAAAGGGCCTGTTTTGAGTGCTTAATAAAAGTTAATATACATAATATACATCTGCTAACGAGATATTTCTTTTTTTACCACTGAATGAACCTCCATTCTATTTCTTTGTGCTCCAAAATGACACTGTGTTTCTGTATTAACCCTTTTTGCACTCCCAGTTTGACTCTTTTCGAACACATAAAAAATACCACAAAATCAAGGGAAAAAAAATCAGAATACACTTAAAAAAAAAGCTCTGTTCAAAGAGGGTTCAATACTATGTTAGGAACTGGGTAGTTCATGTGGAATATGTTGAAACTGTGGTTCCAAATACAGTGTAAAACACCTTATACTGTTATACATGCAATTAGGCTTTAGATATTATGCGAGTGAATTTGAGAAAACCTCATGTTTGTGGCCCCTTCTGACACAAAATCGCAGATAGATGGGTGATAGTTACAGAAAACCCCATAGTCGAATATAGCATTGTGATGTGGACATTCGGCCCAACCGTGGCCTTTTTGCTGTAGGGTATGTTCCTGAAAAAAGTTGGAAGTTTGAAGAAAGTTGGGAGTTTGGAAAAAAAGTTGGAAGTTTATGTGTGTAGGAAAGTTTTTGATGTGATATGATGTGATGGAAAGTTGGGAATAGGGGGGAAACTAAACACGGCTGTAGTGTGGCACTACATCCATCTTGTGTGGGTCCTTGGTGTAAATCTAGAACCACGTTCGCATGTCAGCCTGTCAGGATGGACAGCTGTTGGGCTACGCAGTTAGGCAACCGCCATAACACAACCTTCTGTCCTGATACGTGAGCCATACAAATATGGCTTAAGAATTCCATAAAGGCCCACACTAGACCAGTGTTCTAGAAAAAAGGTCTACAAGGCCACATTCCAGAAAAAGGGTCTACAAGGCCAAGCCGCTGGATACATGGAACGGGTGCCCCAACCTTGCACTGGACACATGTTGTGCCCTGTTGGCAGACCTAACATCATACCACAATGAATTTTTCGGTCTGGATTGCAACAACTCTGGGTTTCATTTACTAGCTTCAATTGACGTGTGTTATGTGAAAATATTTTTAAAACGCGTGGTTTTGTGGTACACAGGGTTGTATTTATACCTGGAGTTTTATGCAATTTATTACTCGTATTGGTCCACTAGGCCACTAGGTATTAATGTTTTTGAAATGGGTTGCATAGTTGCACTAATGTTATGTTGAGGCATGGACCTTTGCCAATGTTTTACACTTTAAGTGTTAGTTGGAGAAACAAATAAATGAAAGAAAAAAAGGGAATGCCCTAATAAGAAGACTATGACCGTATTATAGCCTGAATGTTGGATTGTGCTATGGTTCCCGCACTGATTCATGAATGATAGAAATATTATGTACTTCGGAATTGCATATGTACTTTTGTGCTCTTGAATTTGATTATTCACTATGCTTAGTATATACTCCCTCCGTTTCATATTATAAGACTTTCTAGCATTGCCCACATTCATATAGATGTTAATGAATCTAAATACATATATATGTCTAGAACTCTAGATTCATTAGTATATATATATGAATGTGGGCAATACTAGAAAGTCTTATAATATGAAACGGAGGAAGTAGTTCCACATTCCACGCTATGAGAAATCCACAATTTTCATTTGAACCTGCTTTTCTTTTGCTTAGAGCCTAGCAATTAGCACATACAAGGTCTTGTTCTTAAAGTTCCTGACTGCACCCCAAGTATTTCATATACCTGATTAGCCCAAATAAATAGGTCATGTTCATGCATTAAATGTTGATTTGTGCATATAGAGATGCTATCTGATGGAAAATGATTTACCTTGTGCCATCCAGATGGGTAATCTTCCATTATTTCTGCTCCTGAAACATATGTTCTTTCATTAAGAACCTGTTACTCGTTTTACAGTTAACTGAGTTGCGTTGGAAGGAGGGCTCTCTTGAGAGTGGGCGCCAGCATCTCTTGCAGGTTACTCCCTTAATTCTTGTCATCTGTTACCTTTTGCACGGGCTCAGCGTAATGCTATTGTGGGACTCCTGATCTGCTAACCACCTCTAATTTTTCCTGCAGACCATTGACTCATATATTGCAGACGAGAGAGTAGGACTAGTGAAGCCTGCAGATGGAGTGGAGCTTTACCTCTGCCCTTCTCAAGGGAAGGCAGCACAGATACTTGCAGAGCACCTACCCAAGGAGCACTCGAGCAGCTTAACCGTGACAGGAACATCAGCTATTGGAGTCGTCGTGTGGCGGAGGCCCCATGTTTCACCTAGGATACCCGCCAGGAACGATGGCTCCAGAAACCAATCCATCTCGAGGAAGCAGCATGCCGTGATTGCCAGTGCAGTGCCCTTGTCTTCCAAGCCTACCAATGAGCGTCAGCACCACGGTCAGGATGTTGTAACTGATGATGTTCCTCCGGGCTTTGGCCCTGGTGTTGTTAGGGAAGACGATGACCTACCTGAATACGATTTTGTTACCGTCCCAAACGCAGCTGCCAACGTAGTACCATCACGACAAGCACACAGGAGCCAGCAGCAGCATTCTCAGGCCGCGTCCCGCCGCCCGGTAGACCATGTGAGGGAGATGGTTCGCAAGTATGGTAGCAGATCCGCTGCCGCAGCCCAACCCTGGGAGGAGGATGATGACGATGATGACATACCAGAATGGGATCCAAACCAAAGCAATCTGAATCTCCAGCAAACACGGCATGCTATTCCACAGCCACCGTTGCCTCCACCCGGACCTGTTCATCAGCAAATGCACGCGTATCATCAGCAGCATCAGCAACAGCAGCAGCATTACCAATCCATTCAGCAGTATCACGCAACACAGGAATCGCAGAACACCTTGTCCCAGGCTTACTACGTCCAGTCCCACTCACAGCAGCATTCCGTGCCCGTGCAGCAGCTGACTCATTTGCAGCCTGGCTGGCCGACCACCGCCCAGTGGCTGGCCGCCGGCGCCGCCGGCGCCGCGCATTCCGGCTTGCCGGCGAACAACGTCGTGCAGCAGTACTGCACTTCCGCGACGCCTGACGGTAGTGGCCAAGGCTACGCTACTGGGAACCAAGGCTCCATGCCTTGGAACCTACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020941