BGIOSGA020992

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020992| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020992, complete gene.| tag = OsI_234...")
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Gene Name

BGIOSGA020992

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020992, complete gene.

LocusTag

OsI_23457

Ensembl Transcript ID

BGIOSGA020992-TA

Ensembl Protein ID

BGIOSGA020992-PA

Length

5619

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:23031086..23036704

Sequence Coding Region

23036444..23036704,23035512..23036337,23035312..23035424,23034823..23035010,23033032..23033137
,23032693..23032953,23031794..23031982,23031086..23031244

Genome Context

<gbrowseImage1> name=IndicaChromosome06:23031086..23036704 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:23031086..23036704 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGACGCGGCGGAGCGGAGGCGGCGGCAGCAGCAGCAGCAGCCAGGCGCCGCCCACCCCGCGCGCCGCAAGGTCGTGGAGGAGCCCTTCGACCCCTCCCCTCCCCCGGCCGCCGCCGTGGCGCCGCCTTCCTCCCGCCTCGTCGGCGCCATCGTCGAGAAGGGCTTCTCCTCCGGCGCGGCCGCCGCCGCGCCCTCCTCCGCCCCGAGTCCCACCGTCCTCCCCTTCCCCGTCGCCCGCCACCGCTCCCACGGCCCCCACTGGAAACCGGCGGCGAGGGATGCTGCCATGGCGGAGGGGGAGGGCGAGGAGGAGGAAGGGATGGATGTGGACGAGACGGACTACCAGCCCGTGGCCGCCGCAGCTGGGCCCGTTAAGAGGAAGGAGAAGAAGGGCATGGATTTCAGCAGGTGGCGGGAGTTCGTCGCTGACGATGCGCCCCCGAAGCGAAGGCAGGCAAAGCCGTTGCAGCCGAAGAAACAGACTGCGCAGAAAATTGACGCCGGGGTCGTGGCTGCAACGACGGGTGGCACCGCACAGGAGAAGTGCTCCGGGGGAATTGGTATGCAGCTGGAAGTTGGAAATGGTAAGGAAGAATTGGGTGGAGCTGCTTTGATGTCTGATGTGGCGCCAAGGAAGCCGATGAAACAGGTTGATGCTAGAGATGATGTGAGGAATGTGGAATTGCTAGGAGAGGGTATGGAATCGGATAATGGGGAACCATCTCTTACCGCAGAGATTAATGCGGAGAACATGGCTAGGCTGGCAGGGATGTCAGCTGGGGAGATTGCAGAGGCACAGGCAGAGATCCTGAATAGGATGGACCCGGCATTTGTGGAGATGCTGAAACGACGGGGGAAGGAGAAGTCTGGGAGCAGGAAAGATGGGGGAAAGGGCAAGGGTGGGGGGATTTCAGGCCCAGGGAAGATCTCGAAGGCTATGCCTGGAGAATGGTTGTCAGCTGGTGAGCATAGTGGACACACTTGGAAGGCATGGAGTGAGAGAGTAGAGCGGATCAGGTCTTGTAGGTTCACATTGGAAGGAGATATTTTGGGGTTTCAATCTTGTCAGGAGCAACAACATGGCAAGAAAGCACATGTGGAAACTGTAGGTGAGCGTGATTTTCTTCGAACAGAGGGAGATCCCGCAGCTGTTGGGTACACAATTAATGAAGCAGTGGCACTTAGCAGGAGCATGGTTCCTGGACAGCGCGTGCTTGCGCTTCAGCTCCTTGCTTTGATTCTTAATAGGGCCTTGCAGAACCTACATAAGACGGATCTAATTGATAACTTTAAAGAATCAAATGATGATGACAAGTTTAATGACTGGCAAGCGGTTTGGGCATATGCCATCGGACCTGAACCTGAGTTGGTTCTCTCTCTAAGGATGTCATTGGATGATAACCATGATTCTGTAGTTTTGACTTGTGCTAAAGTTATCAATGCTATGCTGAGCTATGAAATGAATGAGATGTATTTCGATGTTTTAGAGAAAGTAGTAGATCAAGGGAAGGATATCTGTACAGCTCCTGTTTTCCGTAGCAAACCTGATCAGAATGGGGGTTTTCTTGAAGGAGGTTTCTGGAAATACAACACAAAACCATCCAATATACTCCCACATTATGGTGAGAATGATGAGGAAGAAGGTGATGAGAAACATACCATTCAAGATGATGTGGTTGTATCAGGTCAAGATGTTGCTGCTGGTCTTGTTAGAATGGGAATACTTCCACGGATCTGCTTCCTTTTGGAGATGGACCCACATCCAATTCTAGAAGATAATCTTGTTTCAATTCTTTTGGGATTAGCGAGACACTCTCCACAATCTGCTGATGCTATCTTGAACTGCCCAAGGCTCGTTCAAAGTGTTGTTAAGTTGTTAGTCAAGCAAGGATCAATGGAAATTCACTCCTCGCAAATTAAAGGAGTCAATCTCTTGAAGGTTTTGTCCAAGTACAACAGGCAAACATGCTTCAATTTTGTGAACACTGGAGTTTTTCATCAGGCTATGTGGCACTGGTACAGAAAAGCCTATACTCTTGAGGATTGGATAATGATCTGGAAAGGAGCACTGCAAGCTTACTTCAGCATTAATGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MDDAAERRRRQQQQQPGAAHPARRKVVEEPFDPSPPPAAAVAPPSSRLVGAIVEKGFSSGAAAAAPSSAPSPTVLPFPVARHRSHGPHWKPAARDAAMAEGEGEEEEGMDVDETDYQPVAAAAGPVKRKEKKGMDFSRWREFVADDAPPKRRQAKPLQPKKQTAQKIDAGVVAATTGGTAQEKCSGGIGMQLEVGNGKEELGGAALMSDVAPRKPMKQVDARDDVRNVELLGEGMESDNGEPSLTAEINAENMARLAGMSAGEIAEAQAEILNRMDPAFVEMLKRRGKEKSGSRKDGGKGKGGGISGPGKISKAMPGEWLSAGEHSGHTWKAWSERVERIRSCRFTLEGDILGFQSCQEQQHGKKAHVETVGERDFLRTEGDPAAVGYTINEAVALSRSMVPGQRVLALQLLALILNRALQNLHKTDLIDNFKESNDDDKFNDWQAVWAYAIGPEPELVLSLRMSLDDNHDSVVLTCAKVINAMLSYEMNEMYFDVLEKVVDQGKDICTAPVFRSKPDQNGGFLEGGFWKYNTKPSNILPHYGENDEEEGDEKHTIQDDVVVSGQDVAAGLVRMGILPRICFLLEMDPHPILEDNLVSILLGLARHSPQSADAILNCPRLVQSVVKLLVKQGSMEIHSSQIKGVNLLKVLSKYNRQTCFNFVNTGVFHQAMWHWYRKAYTLEDWIMIWKGALQAYFSING</aaseq>

Gene Sequence

<dnaseqindica>1..261#368..1193#1281..1393#1695..1882#3568..3673#3752..4012#4723..4911#5461..5619#ATGGACGACGCGGCGGAGCGGAGGCGGCGGCAGCAGCAGCAGCAGCCAGGCGCCGCCCACCCCGCGCGCCGCAAGGTCGTGGAGGAGCCCTTCGACCCCTCCCCTCCCCCGGCCGCCGCCGTGGCGCCGCCTTCCTCCCGCCTCGTCGGCGCCATCGTCGAGAAGGGCTTCTCCTCCGGCGCGGCCGCCGCCGCGCCCTCCTCCGCCCCGAGTCCCACCGTCCTCCCCTTCCCCGTCGCCCGCCACCGCTCCCACGGCCCCGTAAGCCGCCTCCGCCTCCTCCGCCGCCGCCCTCTATCTCGGAACCCTAGGTTTGATGTGGTGCTTTGGTTTTGTACTCCCTGACTGACTATCTGCTCTTCCGCAGCACTGGAAACCGGCGGCGAGGGATGCTGCCATGGCGGAGGGGGAGGGCGAGGAGGAGGAAGGGATGGATGTGGACGAGACGGACTACCAGCCCGTGGCCGCCGCAGCTGGGCCCGTTAAGAGGAAGGAGAAGAAGGGCATGGATTTCAGCAGGTGGCGGGAGTTCGTCGCTGACGATGCGCCCCCGAAGCGAAGGCAGGCAAAGCCGTTGCAGCCGAAGAAACAGACTGCGCAGAAAATTGACGCCGGGGTCGTGGCTGCAACGACGGGTGGCACCGCACAGGAGAAGTGCTCCGGGGGAATTGGTATGCAGCTGGAAGTTGGAAATGGTAAGGAAGAATTGGGTGGAGCTGCTTTGATGTCTGATGTGGCGCCAAGGAAGCCGATGAAACAGGTTGATGCTAGAGATGATGTGAGGAATGTGGAATTGCTAGGAGAGGGTATGGAATCGGATAATGGGGAACCATCTCTTACCGCAGAGATTAATGCGGAGAACATGGCTAGGCTGGCAGGGATGTCAGCTGGGGAGATTGCAGAGGCACAGGCAGAGATCCTGAATAGGATGGACCCGGCATTTGTGGAGATGCTGAAACGACGGGGGAAGGAGAAGTCTGGGAGCAGGAAAGATGGGGGAAAGGGCAAGGGTGGGGGGATTTCAGGCCCAGGGAAGATCTCGAAGGCTATGCCTGGAGAATGGTTGTCAGCTGGTGAGCATAGTGGACACACTTGGAAGGCATGGAGTGAGAGAGTAGAGCGGATCAGGTCTTGTAGGTTCACATTGGAAGGAGATATTTTGGGGTTTCAATCTTGTCAGGAGCAACAACATGGTAAATCATTTTTCTTTGCTCTTGTGTTGCTTTAGCTTCTAGTGTTCTGGTACCCGTTACATGTCAACCTGGCTTTCCCACTTACAGGCAAGAAAGCACATGTGGAAACTGTAGGTGAGCGTGATTTTCTTCGAACAGAGGGAGATCCCGCAGCTGTTGGGTACACAATTAATGAAGCAGTGGCACTTAGCAGGAGCATGGTTTGTTACTTTCTTTTGTTGTTCAGTGTGAAAATGGACTTTTGAGTAAAGTTCAAGGGCTAAAAATGGACTTTACCCAATGCAATACAACATCTAGTTTCTCTTTAGTATTTTTAGAGATATTAACCTTTGCATGTGAATGGATTTTGTTGTTTTTTATTTTTTTTTAAATGTCATATCATGCATAACTGAGATACACCATCATCGCTTAATGTTTTTCTTACATCATTTCTAAAGTGTGCCTCCAAAATATTGCAAGATAAATAAATGTAATAATTCAGTTTTTACGTTCAAACCATAGGTTCCTGGACAGCGCGTGCTTGCGCTTCAGCTCCTTGCTTTGATTCTTAATAGGGCCTTGCAGAACCTACATAAGACGGATCTAATTGATAACTTTAAAGAATCAAATGATGATGACAAGTTTAATGACTGGCAAGCGGTTTGGGCATATGCCATCGGACCTGAACCTGAGTTGGTTCTCTCTCTAAGGTAAACTGGTTGTTTTCAAACTATAATAATAATTTTAATTTGGATTTGCTTATTCCATGCAAGAGTTTATTAGTTACCAAAGTGAAGAGTACTTAACTGAAATATACCGGACAATTCTATTAAGACTAAATAATCAAGGAACCTTAACACATGCTTTAGTGTCTGCACCTATGCTTAAAATTGTATGCCTGAAAATTTGGGCTGCCACATCTTGTATTTTAGTCATGAATTCATGACAGCAGGCAAGCATTAACAGCATAAGGTCATCTTGTCCATTAGCTATCAGTTAGCACTTGTAAGAAGATGTATCCAGTTAACTTAGGCCATGTCTAGTGTAGGTGAAGCTAAGGTTGTCACATCACAGCCATGTGATACACAGGGTGGATAATTTTTCTTCTCTAGTGTGCTAGCATCGATTTTAGTTTTTGAGTGGACTCCACTAGAAATTTTAAAAACTGGCTTTCCTAGTGTATGCAAATAAAACATTTTGCTTCGCATCAAACCATATATGCATCGATTTTGTTCCTAGCATCTCCTCTTCTAGTGCCTAGAATCATTACTAAGCCTTCAAATCCGCTTGCTAGCATCGGTCAAGGTGTGCACTAGACATGCCCTTATTGTCTTTCTTTTTGCAGTCACGTTGGCTGTTTCATGTATAATAAGTTAGGAAAATTCCATCTATAGCACAAAGTTTTCATAGGTACTAATAAATACCACAATTTTCAACCCTTCCAGAAATGCCACAATGTGACACCACACGTAAAAAATACCACAAAATTTTACAGAACTGAACGTATGACAAATTGAACTATTACCATGGACAAAATTGCCCCTGGCCTTTCTTCAATCTGCATTCAGTAGTCTCCCCGTGATTCCACTCGTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCGAGATGAAGTGAAGCTGGTGGCCACGAATTCCGGCAATGAAGCACGGTCCTACCTACAGTCCGTCCTCGAGGACTAGCGACCGCCGCCAGCCGCGGAGGCCGCCAGCGCCGAGGCCGCTGAGGCGTTGGCTCTCGAGGTGAAGTCTTCCGCACTCCTCCCGTAACCGATGAAGGTCTGGCAACCATGGCCATGCCACTGACCTGCTCTAGCGTGATCCAATCACTTGGTCTCACAGGTCTCCATGATGCTCTTATTGCCGGCGGCCATTGCAACATTCACACATGCATCCGAATCATATGTCCCCAAATCCGAACGCCTAAATCCATTTCCTCCTTGTGTTATTCTCTTGGCCACAGAAAACACCTCGTTTTGGCAGGATTTGCTGCGAATCAAGCCAAATAATCCATTGCCTTCGTGGTAATCTGGGCATTTTCTTTGTAAAATGGCATTGTCCATCCCCGTCTTGTTCTGTTCTGAGTTGTGGTATTTCTGAAAGGGTGGAAAAATCCATGGTATTATTAGGTACCAGTGAAAACTTTGTGCTATAGATGGAATTTTCCCTAATAAGTTATAATCTCAGAAAACTGCGGCGTGACCTAATTAACTGTTGTCTATAGGTTTTTTTTATTTAGTTCTCTCATATGCCATCTAATTAGTTTCTTTGCTTATATGAGTTAATTGCACCAGTGTTAGACCTTAAAATGGCCTATGCTTTTTTCATTGTTTATTCTACTTATGTGTCATCACTAACTGGAATATCTGCAGGATGTCATTGGATGATAACCATGATTCTGTAGTTTTGACTTGTGCTAAAGTTATCAATGCTATGCTGAGCTATGAAATGAATGAGATGTATTTCGATGTTTTAGAGGTAACTTTACTAATTTATCTTCTAATTTATTTTTCGTTGAGAACTTTATCCTTAAATGGCTGATTTTCAACATTACAGAAAGTAGTAGATCAAGGGAAGGATATCTGTACAGCTCCTGTTTTCCGTAGCAAACCTGATCAGAATGGGGGTTTTCTTGAAGGAGGTTTCTGGAAATACAACACAAAACCATCCAATATACTCCCACATTATGGTGAGAATGATGAGGAAGAAGGTGATGAGAAACATACCATTCAAGATGATGTGGTTGTATCAGGTCAAGATGTTGCTGCTGGTCTTGTTAGAATGGGAATACTTCCACGGATCTGCTTCCTTTTGGAGGTGAGGGTCTGGCCATCTGCTCTCCCTCATCCCCTATCTGCCATTGTTTCTTTCAGAATCCCACTGCCATGCATGCACCCAGAATCCCACCGCCATGCATGCACAATATGGGTGCATTAGGTCATCTTTTGTTTACTATATCCGTGAATTGTCTGGTTCCTTGATGTTCAATCCTGTCTAGTACTTGCCATCCATCCTTGAAATGGCAGTGAAATGCCTCCTTACCTGGTTGCCACATCACTTGTTTTCACCAGGAAATCTGGTTTGCAGCAGAATTTGTGGCTGGCTTTGATTGTTCTTTTACCATCGGAAAATTACAATTTTGATATTCAACAACCAAACTATGATAAATTGTGTATAGCCTTTCATTTTTAGCAATATTTTTTATTTCCTGAAGCTATGGGCCTTATCCATTTGCAGTTTTAAGTATTTTGTAGTTCTATGATGTCATGTCATCTGATACCCGTAATCTTTCAAACTTCTTATCTGGTTATTGGACTGTCTCGTAGATTGTTCTGTTCACCCTTGGTGCTCTTGCTTGTTGACTGTTTGTTTTATAGTGATAGCTTTATATTGCAGTTCTATTACTTCACTAGTAAACATCATTTGAGCTAGTTGGTCTTCTTTTTATTTATGTTTTCATTTCCTATTCTACGAGAAAGTGATGGTCATGATTACGGATCTTAATGGTCAAGTTTTTGTTGATTCAGATGGACCCACATCCAATTCTAGAAGATAATCTTGTTTCAATTCTTTTGGGATTAGCGAGACACTCTCCACAATCTGCTGATGCTATCTTGAACTGCCCAAGGCTCGTTCAAAGTGTTGTTAAGTTGTTAGTCAAGCAAGGATCAATGGAAATTCACTCCTCGCAAATTAAAGGAGTCAATCTCTTGAAGGTAACTTCTGGTGATATAAACAATCTTTTATTATAGGAGTATGCTGATTTTGTGTAGTTTTGGAAGTTGCAGATTATTTATTATATAGTTTTTCTTCTATATCATTGGTTGATAATAACTTGATCTAGTTATCCTTCAGAAGGATTCCTTCTGCCAGTAATACCACTTGCAATTGCTGATTGTACATCTGAAATGGTTTCCTTTTGTTGGTAATTAGCTACCAACAGCATCATTATGAGTTTTTTTTTTGTTTGCTGCTTCTGATATCTTAACACATAGCAATTGTATTAGCCATGCCTGCTGTTATCTGAATCAATCACACTCCTTGCACAATGCCTTCACTGTCAACACACGAACTGTTTGGTCCCCCCCCCCTCCTGCGGGCACTTTAGTTGCCCCATTAATTCATTATTATGGTAAGATGAGAAACACCATAGTCATAAGATTTGAATGTTCAGATTATGCTAAAAAAAAATCATTACTTCTATTTCTAAATTTGTCAAAGATTTTTTTTTCACTAGCATCTAATTTCTTGTTCCCTTTGCCTAGGTTTTGTCCAAGTACAACAGGCAAACATGCTTCAATTTTGTGAACACTGGAGTTTTTCATCAGGCTATGTGGCACTGGTACAGAAAAGCCTATACTCTTGAGGATTGGATAATGATCTGGAAAGGAGCACTGCAAGCTTACTTCAGCATTAATGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020992