BGIOSGA021002

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021002| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021002, complete gene.| tag = P0610D0...")
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Gene Name

BGIOSGA021002

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021002, complete gene.

LocusTag

P0610D01.8

Ensembl Transcript ID

BGIOSGA021002-TA

Ensembl Protein ID

BGIOSGA021002-PA

Length

3701

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22840581..22844281

Sequence Coding Region

22844174..22844281,22844031..22844086,22843814..22843931,22843627..22843689,22843471..22843539
,22843233..22843399,22842312..22842376,22842192..22842238,22841795..22841839
,22841646..22841696,22841082..22841168,22840772..22840859,22840581..22840675

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22840581..22844281 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22840581..22844281 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCTTCCGCGCCGTCCGCGGCGGCGGGGGCGACCCCGCCGGACCCCCTCCGCCGCGACCGCATCCTCTCCAGCAAGCTCTACCTCGACGTCCCGGGCTCCAAGGCTCCGGTGGTGTACTCGCCGGCGTACGACATCGCCTTCCTCGGGATCGAGAAGCTGCACCCGTTCGATTCCTCCAAATGGGGCCGCATATGCAAGTTCCTCACCAAGGAAGGGCACCTGGAGAAGAACCGAGTGGTGGAGCCATTGGAAGCGACCAAGGACGATTTGCTGGTGGTGCACTCGGAGTCGTACTTGAACAGCCTCAAGAGCAGCCTGAAGGTTGCGTCCATTGTAGAGCTTCCTCCTGTGGCATTCATTCCTAATTGGCTTGTGCAGCAAAAGCTACTGTACCCTTTCAGGAAACAGGTGGGTGGGTCGATTCTATCGGCCAAGCTTGCACTTGAGAGAGGATGGGCCATTAATGTTGGCGGAGGGTTTCACCATTGTTCGGCAGAGCAAGGGGGCGGGTTTTGTGCATATGCTGATATTTCTCTCTGCATTCAGTTTGCTTTTGTCCGTCTAAATATTTCAAGAGTGATGATCATAGATCTGGATGCCCACCAAGGAAATGGCCATGAAAAGGATTTCGCTAATGATGGAAGAGTTTACACTTTGGATATGTACAATGCTGGAATATATCCCTATGATCATGTTGCTAAGCGGTATATTGATCAAAAAGTCGAGCTAGTTAGTGGGACAAAGACAGAAGACTACTTGGATCAACTTGACAAGGCTCTTAAGGTTGCAGAAAGTAGATTTCAGCCTCAGTTGATTGTTTACAATGCTGGGACAGATATCCTGGATGGCGATCCATTGGGAAGATTGAAGATAAGCCCTCAGGGCGTGGTGATCAGAGATGAGAAGGTGTTCAGGTTTGCAAAGGATCAAAGCATCCCACTACTCATGTTAACATCAGGAGGATACATGAAGTCGAGCGCCCGAGTGATCGCCGACTCGATAATCAATCTCTCGAATAAAAACTTGATAGAGCTTGGTAGCCAGCTTGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MASSAPSAAAGATPPDPLRRDRILSSKLYLDVPGSKAPVVYSPAYDIAFLGIEKLHPFDSSKWGRICKFLTKEGHLEKNRVVEPLEATKDDLLVVHSESYLNSLKSSLKVASIVELPPVAFIPNWLVQQKLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSAEQGGGFCAYADISLCIQFAFVRLNISRVMIIDLDAHQGNGHEKDFANDGRVYTLDMYNAGIYPYDHVAKRYIDQKVELVSGTKTEDYLDQLDKALKVAESRFQPQLIVYNAGTDILDGDPLGRLKISPQGVVIRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLIELGSQLG</aaseq>

Gene Sequence

<dnaseqindica>1..108#196..251#351..468#593..655#743..811#883..1049#1906..1970#2044..2090#2443..2487#2586..2636#3114..3200#3423..3510#3607..3701#ATGGCCTCTTCCGCGCCGTCCGCGGCGGCGGGGGCGACCCCGCCGGACCCCCTCCGCCGCGACCGCATCCTCTCCAGCAAGCTCTACCTCGACGTCCCGGGCTCCAAGGTCGGTCGCCACCGCCGCCAAGGCTAGCAGTTGATTCCTACCGGTCGAGTCGTCACCGCGGTTGCGTCTGTTCTCTTTCCCCTGCAGGCTCCGGTGGTGTACTCGCCGGCGTACGACATCGCCTTCCTCGGGATCGAGAAGCTGTGAGCTGCCTTCCCATGTATCCCCCTCACCATGTACTACTCCTTGCACACGAAGTCTCTCACTGCGCGCTCGCGGTGGACATGGCTGTGGCTGTGCAGGCACCCGTTCGATTCCTCCAAATGGGGCCGCATATGCAAGTTCCTCACCAAGGAAGGGCACCTGGAGAAGAACCGAGTGGTGGAGCCATTGGAAGCGACCAAGGACGATTTGCTGGTGGTAAGAACGGGAGCGATTAGGAGAAGCAAAGGGATATCTGTGTTCTGTTTGGTTCGGAGTGCAGACACCAGTGTTTCTTGGCCTGATATGTTCTGAATTAGTTGTTTGTTTTTGCTTGGACCAGGTGCACTCGGAGTCGTACTTGAACAGCCTCAAGAGCAGCCTGAAGGTTGCGTCCATTGTAGAGGTACTGGTTGTTTAGTAGAAGTCAGACTGGCTTGATTGTCTAGAATTATGTGATGTGCGGGTAGCTAATGAGATTGTTGCATCATAGCTTCCTCCTGTGGCATTCATTCCTAATTGGCTTGTGCAGCAAAAGCTACTGTACCCTTTCAGGAAACAGGTGATGCCTTGTGGTTTGGTGCTAGAAGTTGTATAGTTTGAGTATATTGAAGGCTAATTATATTTTCTTAGGTGGGTGGGTCGATTCTATCGGCCAAGCTTGCACTTGAGAGAGGATGGGCCATTAATGTTGGCGGAGGGTTTCACCATTGTTCGGCAGAGCAAGGGGGCGGGTTTTGTGCATATGCTGATATTTCTCTCTGCATTCAGTTTGCTTTTGTCCGTCTAAATATTTCAAGGTGAGAAAACCTTTATTGACAGGACCACAACAACTGCATATATGTTTGTTTAGTTTTTGGAACTGTTCGTATCTGACACAGAACTCGCTCAAACATGTCAGTAATCTGAGAAGTGTGTAGTGCTAGTGCAGTGATGCACTTGTCCAGACCATTGTCATTCTGCAAGTGCACATGTCCGAGCCCAGCTCGGCACAGATGCACTCATCTTCCTGCCAGATTAAATGCTAAGCAGAAATAACACTTGCTTCTTCTTATTATACCATGATTCTAATGCCCTTGGTATCCCGCATTTTAGAAATACCCATAGCACATTGTGATAAAAGCGTCGCTGTGCATGCTTGCCCACCAGTGCTCAAGCTCTGGTGCAGGTGTGCTCACATTTGTACTATCATCATCAATACCAAGTCCCACCTTTGTCTCACATTTTTTTCTTCAACTGTCAGTATATTGTGCAAGTCTACAAGCTCTCTGTTTTGCCGCTAAAAATGTAGGGAAAATTTTAGCCATCATACTGCTTATATTCTCCATAAGTCATGGGTTCGTATCCTGGAAATTTACACAAACTATCCCCCAACCCATTGCATAGATTGCTGGGAATTAATTTCCAGTTACATCCAGAGAGATAAGGTGCCACACCAGGCTATGCTATCTAGCTTCTATAAACTATCTGTATTATTCCTCTGTCATGTCAATCCTTTTTCTTACTAGGAAGGTTTGGGATACTTGTTGGAATTTAATATTCGATGTGCTTTTCTTACTACTTATTGCATTAGTTGGCAGTGTTGCAAGCTTTTATATTCATTCTATACTGTTAAATTTATCTTTATATGTGCCTAAATTGTTCGAATCATTTTAGAGTGATGATCATAGATCTGGATGCCCACCAAGGAAATGGCCATGAAAAGGATTTCGCTAATGATGGTATGACCTTTACTTTTTCTGCACATTATCTTTTCAATATATAGGTTATTATGATGCCAATTTTCTCTTGCAGGAAGAGTTTACACTTTGGATATGTACAATGCTGGAATATATCCCTATGTAAGAATAACATCTGGAGTATATGGGTTTGTGGTTATACAAGTTCTGGGTTTATTGTGTAGGCTGTAGGGGACACACTTTTGCATTTTATCAGGTTTAGACAACCAGTGTTGAACATATATCAAAACTGAAACTCAAACTGTCTATTTCTGCAATTTATACAAAACTCTCTATTCAAATGTTGTGGTGTTGTTTTTTTGAGACGAAAATGTTGTGGTGTTCAATCTAAAAATGCTATGATTTTCATGTAAATTTTGACCAACTTAAAGTCCAGTCCTTGTCATTATCATTCCCTTTTATCTAATACCAGCTATTTTCTGACTTCCTATGTAAATTGACAACTCCATTTTAGGATCATGTTGCTAAGCGGTATATTGATCAAAAAGTCGAGCTAGTTGTAAGTTGCCTCATGGACCCTGCTTATTACTTAAACTTTTCATTTAATTCAAATTTGAGTTAGATTTCTCATTACGTAATTGTGATTGTGCATTCTAGAGTGGGACAAAGACAGAAGACTACTTGGATCAACTTGACAAGGCTCTTAAGGTATCTTACACTTTTAATGGCGTGATGTTGAAAACTGGCAGTTACATGATGTTTTCCCTGTACCAAGTGCAGTTTTAAGGAGATTTATTAGGTCAAGTATAACATTTTGAGGTGACAATTTTTGATTGATATATGTCCAGAATTTTAAGTAAAGTGAACAAAAAAGTGTTTTTTTACTAGTTAAGCTTCTGATGTTGAGTTAAATTGCATCCATGGCGCTGAGTAAGTTTAGCCTCTGTGCTCAAGGAAGATTGAAATGTGAAAATAAAATAGTACTTCATGGCCAATGCTTTATTGCCAGTACTGTTTCTTTATGTATTGGCAGCTTAATGCACTTGGAAGTTAGAAGCATACTTTCTGTTCTTCCATATCTTTGCAGAATGGCTGCGCTTTGAATCATCATTCTTTGTGTATTTATTTTTCAGTTTTTACCTAACTTGTTACTTACCGGTTCCTCTTGGAGCATGTTATTTGCAGGTTGCAGAAAGTAGATTTCAGCCTCAGTTGATTGTTTACAATGCTGGGACAGATATCCTGGATGGCGATCCATTGGGAAGATTGAAGGTAACTTTTGGAACAATACATATTTCACAAAAAAAATGTTTGTTAAAGCAATCTAATATGTTCCCTACCAAATCTGGATTCTGTTCCAGTAATTCCTGGGTTTCATATCTATCTTGTGAACAAGATAAATAAGGAAAATGATCTGATGCAGAAGTATTACCTACCATGTACCAGATCGTTGTCTAATCCACTGAACTTAACATGATTTCTTTCACCTTCCAGATAAGCCCTCAGGGCGTGGTGATCAGAGATGAGAAGGTGTTCAGGTTTGCAAAGGATCAAAGCATCCCACTACTCATGTTAACATCAGGTAAGTACCAACACATTTATGGATTCTTAAGCCAATCACAGGCAACCTCTATTGCCATGGTATTCATGTGCACACTTTCCATCTGCCCGTTCTCAGGAGGATACATGAAGTCGAGCGCCCGAGTGATCGCCGACTCGATAATCAATCTCTCGAATAAAAACTTGATAGAGCTTGGTAGCCAGCTTGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021002

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021002&oldid=43527"