BGIOSGA021008

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021008| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021008, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA021008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021008, complete gene.

LocusTag

OSJNBA0062E01.38

Ensembl Transcript ID

BGIOSGA021008-TA

Ensembl Protein ID

BGIOSGA021008-PA

Length

6722

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22789819..22796540

Sequence Coding Region

22796471..22796540,22792165..22792325,22791909..22792070,22791614..22791754,22791276..22791530
,22790998..22791156,22790704..22790898,22789819..22790136

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22789819..22796540 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22789819..22796540 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGAGGTAGGGCGCCTGCTGTACCTGCTTGGGAGGTGGCTCCCGTTGGATCAATTCGACTTTGCAGCTGTTCCTGGTTTACCCATTATCGGAAATCTGCATCAACTGAAAGAAAAGAAGCCTCATCAGACCTTTGCAAAATGGGCTGAAATTTACGGGCCAATCTACACTATAAGAACCGGGGCTTCTTCTGTAGTTGTGCTCAATTCAACTGAAGTAGCCAAGGAGGCGATGGTTGCAAAATTCTCATCCATATCTACCCGAAAGCTATCCAAAGCACTGACAGTGCTTACTCGTGATAAATCCATGGTTGCTACCAGCGACTATTGTGATTTCCACAAAATGGTGAAGCGTTATGTCATGTCAAGCATGTTGGGTACTTCTGCACAGAAACAATTTCGTGACATAAGAGATATGATGATCCATAACATGTTAAGCACTTTTCATAAACTGGTGAAAGATGACCCACATGCTCCTCTGATATTCAGAGATGTTTTCAAGGATGAGCTATTCCGGTTGTCCATGATCCAGAGCTTAGGAGAGGATGTGAGTTCAGTCTATGTGGATGAATTTGGGAGGGACATTTCGAAGGAAGAAATCTACAATGCTACTGTGACCGACATGATGATGTGCGCAATTGAGGTCGACTGGAGAGATTTCTTCCCCTACCTCAGCTGGGTTCCAAACAAGAGCTTCGAAACAAGAGTGTTTACTACAGAAACTAGACGAACTGCGGTGATGCGCGCCTTGATCAAGCAGCAGAAGGAAAGGATTGTGCGTGGAGAGGCAAAGACATGCTATCTGGACTTCTTGCTGGCAGAGAACACACTGACAGATGAGCAACTGATGATGCTAGTGTGGGAGGCACTCATAGAGGCTGCAGATACTACCTTGGTCACCACAGAATGGGCCATGTATGAGCTTGCCAAGAACCCTGACAAACAGGAACGGCTTTACCAAGAGATCCGGGAGGTGTGCGGCGACGAGACGGTCACCGAGGAGCACCTCCCACGGCTGCCGTACCTCAACGCCGTCTTCCACGAGACGCTGCGCCGCCACTCCCCTGTCCCGCTCATACCTCCGAGGTTCGTCCACGAGGACACCAAGCTCGCTGGCTACGACGTCCCCGCCGGCACCGAGATGGTGATCAACCTGTACGGGTGCAACATGAACAGGAAGGAGTGGGAGTCGCCGGAGGAGTGGGTGCCGGAGAGGTTCGCCGGCGGGAGGCTCGAGGTGGCGGACATGTACAAGACGATGGCGTTCGGCGCCGGGAGGAGGGCCTGCGCGGGGAGCCTGCAGGCGACTCACATCGCGTGCGCCGCCGTCGCGCGCTTCGTGCAGGAGTTCGGGTGGAGGCTGAGGGAGGGTGACGAGGAGAAGGTGGACACCGTGCAGCTCACCGCCTACAAGCTCCACCCGCTTCATGTCCACCTCACGCGCAGAGGAAGGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MVEVGRLLYLLGRWLPLDQFDFAAVPGLPIIGNLHQLKEKKPHQTFAKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKFSSISTRKLSKALTVLTRDKSMVATSDYCDFHKMVKRYVMSSMLGTSAQKQFRDIRDMMIHNMLSTFHKLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKEEIYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTETRRTAVMRALIKQQKERIVRGEAKTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDKQERLYQEIREVCGDETVTEEHLPRLPYLNAVFHETLRRHSPVPLIPPRFVHEDTKLAGYDVPAGTEMVINLYGCNMNRKEWESPEEWVPERFAGGRLEVADMYKTMAFGAGRRACAGSLQATHIACAAVARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTRRGRM</aaseq>

Gene Sequence

<dnaseqindica>1..70#4216..4376#4471..4632#4787..4927#5011..5265#5385..5543#5643..5837#6405..6722#ATGGTGGAGGTAGGGCGCCTGCTGTACCTGCTTGGGAGGTGGCTCCCGTTGGATCAATTCGACTTTGCAGGTTAATCAAATTGTGTTTAAATTTGCAGGCTAATCAAATTGTGTTTAAATTTGCTTTCACTTTAATTTTAAGGGGCCATGTGGCATCTTAAATTTTAAGGAGCCCGTTAGCTTTCCTACTCCATTACAAAAGTATGACATATATTATGTTGAACTAATTAAACAGTCCAACATCAACAGTCCAATATAGACAAAATAAACGATTCTTCTATATATGTACCCCAAAAAATCTACTCTTGGTTAAGGTGAACATCAAACAGATGTCAACAACAGTGTATAATATCATCATCAAACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCATCTCTCAATCTCTCTCTCACTCACTCACTGTCACTGTTTGATGGAATGCCGCCCTTGGTGAGTGGTGGGGATTGGCACTTACCATCGGTGGAGAGGGGTGAGATTCGCATCGCACCGGGAATCAACAGGAAGTGGCCTCGCCGCCATCTCATCCATCGCGGTCGCGCCAGGCCCCGCCGACGAGGTCCGGGCCGCACGGCGCTCGCCGGACCACGGCTTGGTGCTGCCCACGGGCGCACCCCCCCAGCCGGCGCAGATGGAGCCGCTCGGCGCTCGTCGTCGCACGCGTGCTCCACCTCGCCGTCTCCGCCATCGCCGGCACCCACTCACACGCTCCCTCGCCGGGAGAGATCGGGGAGAAGAGAAGAATAGAAAGGGGGATTAGGGTTTACCTCAGCCGCCGGCGATTTCTCCGGCACGGGGGAGATCCTGGCCGTCCAACAGATCGGACGGTCGACCTCGCTCCCGCGTTGGCCCGCTGTGCTAATGCGGCCCACCCGATTTCATGGGCCTTCCGCTTCCGCACCACCTGGGCCGCGCCGCCGCAGCTCTTAGCCCGCGCGCACATGCGGCACGAACGCCTCTTGCCCCATTTCCACCGCCCTCTCCCGCTTCCGGCGATGTCCACGCCGAACAGCCTCACGACACGTGCTGCTTCGCTGCTTGTAATTGGCTTCTCGTCGCCGGTGGCCGCCGCCGTGTTGTTCTTCTAGCAGTCGATGAAGAGCAGCTCGTCGGCGCAGAGGCCCTTCTCCCTCACGAATCGGCTCCATCCCTTGGTCAGCACGTAGCTCTGGCTGCTGTTCCTGGACGAGTCACAGGTAGAGAAACCTTTGTATTCCGGTTCGTAACACCAATCGGGACTAAAGTTAGGATCTTTAGTTTGTACTCCCGGCGGGGTCGGGGCAGCAGCGGTGGCGGCAGTTGGAGGGTAGAGGGCCGGCGTGATCGCGCCAAGGAAACGCTCCAACGCGCCCCCAGGTCAGCCGCCCCCCCACCAATCTCTGCATCTCTCTCACTCACCCGCTGTCACTGTTTGATGGAATGCCGCCTCGGTGAGTGGCGCGCGATCGGCGAATTGGTGGAGAGAGGTGAGATTCGCATCGCACCGGTGAGTTTCTTAGGAATTGGAGATGTGTGTTGCTGCTTGAAATCAAAAACTCTGATCTCTTGATTCCCTTTAAAGATTTGAGAGCCAATCAAGTTTGCATTCGCCACAATTTTCGCACCGTTCTCCGTCACTGTCTCTTCTCACTCTCTGTCTCTTGATCTCTCCATTGATATCACTCGGAGACGGAGGCGGAGACGGAGACAGCGGTTGATGCCACTGCTCGCGTAGGAACATCTTGAATTTTCTCCCCTCCTTTTTGATCTCCCTTTGATGGAAACAGAAGCTTTTGTCCTGCCTTTAGGCAGAGACGATCAGAAGAATCTATCCTCTCCTTTGCTTTACATTGCCTTTTTTTCCTTTTCTTCATGTTATTCTTTTTTTTCTATTCAAGTAGAACGATATACCTCGTGGTGATCATGGTAGAGACCGAAAATGTAAAGCATTTCCATTATCTGCGAACAGAATGATGGGATGTTTAGTATTTTCTCAAACAAACATAGGCATTGCACTGACAGGATTGAATTCTAAATAAAGGAATAAATAAAAGATGGGCCAAATTGTTTCGAGAATCACTGGATCACACTTTGAATTGTTTGGATGAAATTTACCAAAAAGCAAGTTGCTCTTCAGAGGGCATGCATTCATGCCCTTCAATAGGGCGTAGCAAGGAATTAGAGGTCCTGGTGCGAAAGGTATAATGGGACCTCAACATATGATTACATCTAGTTCTAATCGATTTAGCTTTAGATATTAAGCCCTGTTGTGCCTTCTACTTTTAGTTTTGGGTCTTAGGTTCTCTGACCGTCTGGGCTTTAGCATTTTAGTTATGCTGCTAATTAAGTACTCCCTCTGTCCCTAAAAAATCAACATAGTACCAGATGTGTCACATCGTATTACTATAAATCTGGACATAGATCTATCATATTCGTAGTACTATGATGTATCATACCGGTACTATGTTGATTTTTTATGTGACGGAAGAAGTATATACTTAGCACTTCATGTAATTAAGATTTGGGGCTGAACAATCGCACACCTCACTATGTTACTGTACGGCCTGTTCTCCAAACAGACAGCCCTTTCTCTCTCGCTATTACCAAAATTTCAGACGATTTTTTTATATTTGGAATTTCGAATATTTTTTCATGAATTTGATCCCCCCTCCTCCCGTAAATTCAAACAAATTTAAAATTTTTATGCCAGAGGCATTTCCTGCTTACTGGTACCTTCAAATTAACCGGTGCTGGATTACAGATAGAGGATGAGCCGAGGGGTTTGGCGGTAGCTTGCTTGTTTGCAGATAATAATTTTATTTAAACATATAAATTTGTATGAAGCATAAAGCGGAACGCCTTTCTTACCAGTGACTTACTGTAGCCTTCCGTTTATTTTTGGCTGGGAGCGTGATTTTTCAGTTGCAACTGTAGAAATTGATTTTTCAATTGCAGTAGCTTTTCCCAAAGCTATCCTCATCGGACCACTTGGATAGCAGTTTTTTTGGTAATTATTGTTCTCTTGATTTTTTTCTCTAGCACATTAGTTCTTCTGATTAACGTAGTGTGGATTTGAAAATTAGGAAACTATCATAGAGTGAAACATTCTAAGTAAAGAATTTAATGATATCACATAGAGACTAGCTTTTTGTATAGTATGTCATAACCTTAACAAACTTTAGAAAACTTTCATTAATCCATAAAAAGCTTCCAAATTTGTTCCTCTGTTTTATAAAGATTTCGTGCTGTGTTAGCTTGCGCTTATTGCCCCATGATGATGGAAGGACATACATCTGTTTTCCATTAACAGCCAATAAATTCATATAACTCGCGTTATTACTTTGCAAACATAACTGAAATGACATTCCCTAAATTTGTCGATTGTTTTTCAATCTTCCTTTTGATATATCAAAATTTTAAAAAAGTAAATATAGTATAAGTAGACAAAAGACTCCCACTTTCACTGGAGACACATGGTACATCATGTGTTCGTGGAACAACATCGACAATATGTACTTAACCAAACCCAATCGGCATGTCTATGCGAATGGCAGAATGTGTATGGACAGCACCAAGAGTCCAAGGCAGAAAAAAAAGGAGAGTAAATGGCATAATAAATAAAGAAAAACCTGATGACCCATAGAAACGAACAGGAGAATTTTGAAAATATTCAGATCAGCGCTATTCATTTTGATTTTTTATAAGTCAAACTTCTTTAGGTTCAATCAAATTGAAATAAAGAAACTATGAAAATATGTTCAATGTAGATAAACTAATTTAGTTCTATAAGTATTGCTATATTTTTTTTTATAAACTTGATCAAACTTTCAAGAAGTTTGATTTAAAGAAAAAGTCAAAACAATTTATAATATGAAACAGATGGAGTATATATATTTTGTTGACCCACTTGTGAGTTGAGAGTGCAAAGTATTAATTATTGTGGTCTATAGTCACCTAATTCTATTCGACCATCATCATGTCAATATCTGACAAAATCTGACAACATCACCGAAGAAAGGGACAACACTAATTCATCACTAGGCTAGTTACTTGCATGAATATATGGTGTTATCATCTATGCAAACAAATTATCAGAATAACTCATTTCAAGTTTTTAGTCTAGTGTGCAAGTTCTAAGTCTCCTATGATTCTATGATTCTATTTCATTGTCATGCAGCTGTTCCTGGTTTACCCATTATCGGAAATCTGCATCAACTGAAAGAAAAGAAGCCTCATCAGACCTTTGCAAAATGGGCTGAAATTTACGGGCCAATCTACACTATAAGAACCGGGGCTTCTTCTGTAGTTGTGCTCAATTCAACTGAAGTAGCCAAGGAGGTAACTTGGAAGTTGTCTATCATTTTTATTGACTTGCATAGCTCAAGAATGATAGTCTCAAGAAACCATGGATTTACTGTACTCTCTTTTGCAGGCGATGGTTGCAAAATTCTCATCCATATCTACCCGAAAGCTATCCAAAGCACTGACAGTGCTTACTCGTGATAAATCCATGGTTGCTACCAGCGACTATTGTGATTTCCACAAAATGGTGAAGCGTTATGTCATGTCAAGCATGTTGGGTACTTCTGCACAGGTATACTTCTCAACAATTTCATTTTTCATTTTTAGTACTGATTATTCTCAATAACTCCAGTGTGCATTTTCAGATTTTATTATCTGCTACCAGTTACACTTTCAGAGTTTCAGTATCTGTGGTCTGACAACGCAAATGCTTCCATAAATTTCAGAAACAATTTCGTGACATAAGAGATATGATGATCCATAACATGTTAAGCACTTTTCATAAACTGGTGAAAGATGACCCACATGCTCCTCTGATATTCAGAGATGTTTTCAAGGATGAGCTATTCCGGTTGTCCATGATCCAGGTTTGGATTGTCTCTCTGAACTTGAACTGTCAGATGGTCGATTTGTTATTTCTGGCACTAACAATTAATGTCGCAAACTTCAGAGCTTAGGAGAGGATGTGAGTTCAGTCTATGTGGATGAATTTGGGAGGGACATTTCGAAGGAAGAAATCTACAATGCTACTGTGACCGACATGATGATGTGCGCAATTGAGGTCGACTGGAGAGATTTCTTCCCCTACCTCAGCTGGGTTCCAAACAAGAGCTTCGAAACAAGAGTGTTTACTACAGAAACTAGACGAACTGCGGTGATGCGCGCCTTGATCAAGCAGCAGAAGGAAAGGATTGTGCGTGGAGAGGTGAGGAAAGGCATACTTTGACAAATGACATCTTTCATATTTGCTTCTATGCCAAAAAAAAAAAAAAAAAACTTGCAGAGATCATCTTTTAACTCCATGAAACTGAGATATATGTGCAGGCAAAGACATGCTATCTGGACTTCTTGCTGGCAGAGAACACACTGACAGATGAGCAACTGATGATGCTAGTGTGGGAGGCACTCATAGAGGCTGCAGATACTACCTTGGTCACCACAGAATGGGCCATGTATGAGCTTGCCAAGAACCCTGACAAACAGGCAAGAAATATTGTTACTCTGTTCCAGCTCATTGTTGGCATTCTTGGCATTATCAACCAAAGCTTTTTATTTTTGGCCTTCTTCTTGTTGTCATGCCAGGAACGGCTTTACCAAGAGATCCGGGAGGTGTGCGGCGACGAGACGGTCACCGAGGAGCACCTCCCACGGCTGCCGTACCTCAACGCCGTCTTCCACGAGACGCTGCGCCGCCACTCCCCTGTCCCGCTCATACCTCCGAGGTTCGTCCACGAGGACACCAAGCTCGCTGGCTACGACGTCCCCGCCGGCACCGAGGTAAGCACAACCACTCGGGCCGAAACTTTCGTGTTTTCGGTACTTGTTTTGCACGAAATTATTTGAGTTTTTAACCGAATTTGTATAAAATTTTGACCAAATTCACAAAACTTTGGAAAATTCTGAAAATTTTGGGCGTTATTTTTAAGATAATTGATAGAAATCTGACCTCTATATCCACAGTGGACCATAAGAAAACAAGCTTTGAATAAAAATAACACAAGATTAAGCTACACTTTTCTTCTATATCCTTGTTTCAAACCTGCCTTGGCACATCCCGTTGAAATCCAATACTCCCTCTGTCCTAAAATATAGAAGCCTAGAATCGGATATGACATTTCCTCTATCCTAATACTAGGAAATTTTCTATCATGTGCTAGGTTCTTATATTTTTGGACGGAGTATTTTTTATCATATCAGGCAAACTTGTCGTTCTTGACTTCTCGTAGAGTTTTCGGGTGGGATATAATTGCTTGCCTGGGGAGTCCAAAATTTTAATCACTGGTCAACTCGCCGATCAGTGATCAAAATCCCCTAACAATCTAACAAGTGATGGTCATGTGGCAGATGGTGATCAACCTGTACGGGTGCAACATGAACAGGAAGGAGTGGGAGTCGCCGGAGGAGTGGGTGCCGGAGAGGTTCGCCGGCGGGAGGCTCGAGGTGGCGGACATGTACAAGACGATGGCGTTCGGCGCCGGGAGGAGGGCCTGCGCGGGGAGCCTGCAGGCGACTCACATCGCGTGCGCCGCCGTCGCGCGCTTCGTGCAGGAGTTCGGGTGGAGGCTGAGGGAGGGTGACGAGGAGAAGGTGGACACCGTGCAGCTCACCGCCTACAAGCTCCACCCGCTTCATGTCCACCTCACGCGCAGAGGAAGGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021008