BGIOSGA021011

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021011| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021011, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA021011

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021011, complete gene.

LocusTag

OSJNBA0062E01.27

Ensembl Transcript ID

BGIOSGA021011-TA

Ensembl Protein ID

BGIOSGA021011-PA

Length

7000

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22731527..22738526

Sequence Coding Region

22738391..22738526,22734797..22734957,22733289..22733447,22733048..22733188,22732639..22732893
,22732437..22732553,22731527..22732039

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22731527..22738526 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22731527..22738526 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCGATGCTCGTAGCCGGAGCGGGCGCGGCGGCGGTGGCGGCCGTCGGGGGCCTCGTCGCGGCGGCCGCGCTCGCCGACAAGCTCGTCGCGGCGCCGCCGCCGCGCAAGAACCGCGCCAACCCGCCTCCAGCTGTTCCTGGTTTACCCATTATTGGAAATCTGCATCAATTGAAAGAAAAGAAGCCTCATCAGACGTTTGCAAAATGGTCTGAAACTTATGGACCAATCTACACTATAAAGACCGGAGCTTCTCCAGTGGTTGTGCTCAATTCAACTGAAGTAGCCAAGGAGGCGATGATTGACAAATTCTCATCCATATCTACTCGAAAGCTACCAAAAGCAATGTCTGTGCTAACTCGTAAAAGTATGGTCGCAATCAGCGACTACGGTGACTACCAAAAGATGGCGAAGCGTAATATTATGATTGGCATGTTAGGTTTTAATGCACAGAAACAGTTTCGCGGTACAAGAGAGAGGATGATCAGTAACGTGTTAAGCACTTTGCATAAGTTGGTTTCTCTTGACCCACATTCCCCTCTGAACTTCAGGGATGTTTACATTAATGAGCTGTTCAGCTTGTCCTTGATCCAGAGTTTAGGTGAGGATGTGAGTTCAGTTTATGTGGAAGAGTTTGGGAGGGAGATATCCAAGGACGAAATCTTTGATGTCCTTGTGCATGAGATGATGATGTGTGCAGTTGAGGCTGACTGGAGGGACTACTTCCCCTACCTCAGCTGGCTTCCAAACAAGAGCTTCGACACAATTGTGTCTACTACAGAATTCAGACGAGATGCTATCATGAATGCATTGATCAAGAAGCAGAAGGAGAGGATTGCACGCGGAGAGGCAAGGGCATCCTACATTGACTTCTTGCTGGAAGCTGAGAGGAGTGCACAGCTGACAGATGACCAACTGATGCTGCTGCTGTCGGAGTCCATCCTGGCTGCAGCTGATACTGTCCTGGAGCTACTCTACCAAGAGATCCGAGAGGCGTGCGGCGGCGAGGCGGTGACCGAGGACGACTTGCCGCGGCTGCCGTACCTCAACGCCGTGTTCCACGAGACGCTGCGGCTGCACTCCCCGGTGCCGGTGCTGCCCCCGAGGTTCGTCCACGACGACACCACGCTCGCCGGCTACGACATCGCGGCGGGCACCCAGATGATGATCAACGTGTACGCGTGCCACATGGACGAGAAGGTGTGGGAGTCGCCGGGGGAGTGGTCGCCGGAGAGGTTCCTCGGCGAGGGGTTCGAGGTGGCGGACAGGTACAAGACGATGGCGTTCGGCGCCGGGAGGAGGACCTGCGCGGGGAGCCTGCAGGCGATGAACATCGCGTGCGTCGCCGTGGCGCGCCTCGTGCAGGAGCTCGAGTGGAGGCTGAGGGAGGGCGACGGGGACAAGGAGGACACCATGCAGTTCACCGCCTTGAAGCTTGACCCGCTGCATGTCCACCTCAAGCCCAGAGGAAGGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MESMLVAGAGAAAVAAVGGLVAAAALADKLVAAPPPRKNRANPPPAVPGLPIIGNLHQLKEKKPHQTFAKWSETYGPIYTIKTGASPVVVLNSTEVAKEAMIDKFSSISTRKLPKAMSVLTRKSMVAISDYGDYQKMAKRNIMIGMLGFNAQKQFRGTRERMISNVLSTLHKLVSLDPHSPLNFRDVYINELFSLSLIQSLGEDVSSVYVEEFGREISKDEIFDVLVHEMMMCAVEADWRDYFPYLSWLPNKSFDTIVSTTEFRRDAIMNALIKKQKERIARGEARASYIDFLLEAERSAQLTDDQLMLLLSESILAAADTVLELLYQEIREACGGEAVTEDDLPRLPYLNAVFHETLRLHSPVPVLPPRFVHDDTTLAGYDIAAGTQMMINVYACHMDEKVWESPGEWSPERFLGEGFEVADRYKTMAFGAGRRTCAGSLQAMNIACVAVARLVQELEWRLREGDGDKEDTMQFTALKLDPLHVHLKPRGRM</aaseq>

Gene Sequence

<dnaseqindica>1..136#3570..3730#5080..5238#5339..5479#5634..5888#5974..6090#6488..7000#ATGGAGTCGATGCTCGTAGCCGGAGCGGGCGCGGCGGCGGTGGCGGCCGTCGGGGGCCTCGTCGCGGCGGCCGCGCTCGCCGACAAGCTCGTCGCGGCGCCGCCGCCGCGCAAGAACCGCGCCAACCCGCCTCCAGGTAATTAATTAATCCAGCTCGCCGTGTTCGTTTCGATCGATCAAATGATCTTCTCCAATTGGTTTGATCCTCACTGCTGCTGTGTCTCGGTGTTCGTCGTACTCTCTCCATTGATTGATCTCTGTTGGAGATGGCAGTGTATGTGGTTAGTTTGTTCGTCGGAAAATATGTCGAATTTTCTCTGTTTCAGCTAGTGCGTAAGCTTTTTTTTTTTGATGGAATGGTAATTTCTGGTGTCGCAACAATTAGAAATGAGCATGAATGATCAGTTTGGCGTAGATAACAGGATTTGAGCTATAACAGCACTCACGGCTGCGACAGCACACCTATTGTGCACAAACAAGTACTCCGCCGTTCTAAAACATAAGTATTTTTTTTACATGTACACGATCTCCGAGATGATACTTTAATCAACAATATCTACAAAAGTAAAATGTCTTAAATAAAAAGAGTTGCATATTATGATAGTTCGTTTAATGATAAATATAATAAAATTAAATTTACATGATTAATCTTTTTTAAAAAGTTTGACTTAGCACTGTTCTAAAAATGCTTATATTTTGGGACAGAGGGAGTAATATAAATGGAGGAGGTGGTTAGTGGTTTTGGCAGATGTAAATATAGTATAATTGTAGTGTAATTACATTGTAACTTACATATAACTACGATATAAATTTGAACCGTTCGATTTGCTTTAAAATTCGCAAGGGATGTAGGAAAAAATCACAACCCACTCACATGTGAGGCGCTTCAGTACCATTACCTCCGTTTTCACATAAGTAGCACATCACCTAGGGATTTTTGAAAATTACATACTCCCTCCGAGCTGATGATATTAGTCGCTTTAAATAAGGATAAAATCAAACCTTAAAATCTTTGACTATAAATAATTTCTCAAATATTTATCTTAAAAATGAAACCATAATATATATATATATATATATATATATATATATATATATATTAGTCTTAAAAGTACTTCAATAAAATCATATATTTGTTGATATTTCTATATATATTATAATAGAAAATAGTTATCAAAGCTACTCTTTGGAGACTGTGCCCTTGTCCAAAACGACAAATATTATTAACCTGGAGGGAGTACAAGTTAAACTATAGTTACATGTAAGTTACGTTGTAATTACATCACGGTATTTACACCTATCAAATTTTTTAGCGAAAATTTAACGACAAATGTATAGCTAATCCCTTAATTTTGATATATTGCTTGAAAATCGAATTTTCCGAACAGCAATTTGTCGCGATGGACCATATAGGAATTAAAGTGGATAATCCAAATCCACTAGATTTTATTGAAACTATATATCCTAATCCTAATACTAATCCGTTGGATTTTGAAAAAATACTTACCATATCTCCGTTCGATTGGATTCAGAACGGATCAGATTGAAAAGTGTTAAATCATTTTTCATCCTTTTTTTTTTGAGAAATCCTTTTTTTTTTCTGTAGTCCTCGGTTCAGTTTTGACTGAATGTCTGAAAGGGATGTTGTTTAATTAACTTGAAACAGTTCAAAATTACAAGCATTCATGTCTCTGTCAGTTGAAGTAGCCTTCTCCTTCTCTTCTATATGTTCGTCAGACTACTTCAGAAAGTAGGTACTTCCTCTAGTCACGAATATGTTACTGAGAGGCTATAACTAAAAACACAGTACCTCTGATTTGTAATAGATAATGCCCTTAACATTTGAAAATATGTTTACTCATCCATCTTATTTATAGAATTTATATAATTATTATTTATTTTTTGAGTTATTTTATTATTAGAAATATTTTAAGCATAATTCATATCTTATTCACTTACCCAAAATTTTTAAATAAGACGAATAGTCAAACGTGTATCAAAAATTAACTGAGCCGGAGAGAGGATATCTGAAACTATGAAAAGAGGAGCAATTAACCATTTCTTCCTTAATCCGCCTGCATGCAACTTGAAATCACAAAAGCAAACTCAAGTCAATGCCATGGGGAAAATTTACAGTAGCCCCTGCTTGCAGGTACCAAAAGAAAATTGATCAATTTCATGCAGGTGTGACCAAAGTACTGGATTCCAGGCATAGCACAAGAACATTCCACGGAAGTACCACAGCAAACTCAATCAATCGTTTTACTTGGTCCAAAAGAATTAAGAAAACTGTGCACCTCTTAACCCATTCTAATGATGAGGATCCATTTCCTAATTAAAGGACTTTGTTGTCAATCAATTAGACTATATTAATAAAGATGAGCCATTTATTTTATCTTTTTTTTTTTTGAAAAATGTTGACCAGAGAAGAGAAACATCCCAAAGGCATTGCCATCTTACCTGTATACGGACTCTGTTGCCACCGTTCTTAAAAACTTTTAAAATGATTTTCATTTTCTACGGAAAAGAGTATTAATGTAGAATAGTAAAAAAAATCATTATCAGTATTTCCGACGGTGGCGGGGAGTTATATAATATATATTTATGATGAATTGTATTCCCCTGCTTTTGTTGAAACAAAGTGTTCTTTCAATATCTCATTCACTATTCATTTGACTTATATGGATTTTAAAAATAGGCAATTTATATGCCATACCGTTATCCATTCTGAGCATGGACTAAATATTTAGAACGTAAATTTTGAACAGACTAACCTTTTAGTGTGCCGGAACTATTAAAAAAAATTAAAGACTTTTATTAATCCATAAAATATGTCCGAAAATGTGTTCTTCAGTTTGTTTTCTTCTGGTTAAGTATGCACTGGTTCTAGTTGGCACATGTATAATAGTTGTGATTGCATATCTATTTTGCTGATTAAGAGTAAACAAATGGAAATAACTTTCTTTGAGTTACGCTTTCAGTTAAGATTGTTTTGAAATTATTAATGTGCAAAATGAAAGTAGTTATTATAGATCCTTTCAGATATGTCTATTTCGATGAGCCACTAGTGCCTGTGTTGAAAATGCAAATTATTCTAGACAAATTTTGCTAGAGGACTTTGTGACTTCGTGATTTTAGCTGTATGACACTGCACGAAGTAACTTTGGGGGACAACACTCTATAAACGTGAAAATTGACTCGTCGACACCGCTTCTATTAGAATATTCATTCCAGGTTGAATATGAGAGTGAAATCATGTGAAAGTTCTGAAATGCCTCTGAGCCTACATGTGAGGTCTACCATCTCTCTATCACTGGCCAAAATTTCATCAGATATTTTTAGCTTATTTGATTGTGTTTACTCCATCTGTCCATCATCTATCCATGTACATAGCTAGCATTCTTACTGAAAAATGACCCAATAAAAGGAAATATAGAACCTGTACATGTTAAATTACTTGCTTGAATGTTTGGTGTTTTCATTTATGCAGAGACGAATTACCAAAAACAAATTAATTTCAGTCCACTACAAGAGCTTTAGTAATAACATCGTTAGTTATTGTAATGCAGCTGTTCCTGGTTTACCCATTATTGGAAATCTGCATCAATTGAAAGAAAAGAAGCCTCATCAGACGTTTGCAAAATGGTCTGAAACTTATGGACCAATCTACACTATAAAGACCGGAGCTTCTCCAGTGGTTGTGCTCAATTCAACTGAAGTAGCCAAGGAGGTATGCAAGTTGTCCTTTTTCAGCATTTTTTTGTTACCTGTTAATGTTTTCATTTTCTTTCCGACTACCCAAATTGGTGTCCCCATATACTCTCCACTCTTTTACCCACACTTTTCATTCACTGATATCCTGGACTAGCACCACAATTTGCTCGAGCTAAGGGTGCTGGTGGTCCATCTTTGTTAGGAAATAAAATAAAATTATCATGACTGTTGCATCAAGCAATGCATGTATTCTTACATAATTGTAACTCTGGTGACCGCATACTGTTATAAAATCAACCTATCCGACATTACAACTCCAAGTCTTAAATTATAACCGACTTTATACACATATTCGACACAAACTCTAACAAATAAAGTAATAACTAATTCAATAGAAACAAACATAGACTTATATGGTTCAAAATTTAATCTTAGTTTTCCCCTTTTTTTTCAAAATTTTCACTTAATCTATCTTTAGACTCTTTTGAATTTCTATTCAAACAGATAAAACTCTGAAGAGCAAGGAATTCAAAAGAGTACAAATATGTGATGTTTTTTTTTTTTAAAAAGATGAATTCAAACTGATGAAATTTAGAATAAATAGGCAAGGTTTCAGATTGATCAACTCGAAAAAAATTGCTCTAAAATGCTAAAACACGAATGAAGGGGTAGTTAAGGACAAGGAAGCACACGTGGTTACAGTTGTACCATTGTTTTTACGCTTTTCAAATTATCCTTACACATGCAAAATAGAGGTGCTTTTAGTATGATGTGTATGTAAATTGCATGGTTTTGACAATTTCAAATGCTATCCTATCCGGTTACTTAGTTTACAGTTGATTTTTTTACTTGTGCAAAAGTTTAGAATTGTAAGTGGACATTTCTCTTGATAAATTAAATGTGAATATCATAATTACAATTAATTCAGATCAGAAATGAAATTAACCTACAACATGAACTCTAGAGCTAATATGATATTATTTTTTGTTTCTCTTTTTTCGTGGAGGTAAAACTGTAAACGCTTTGGTTCATGCAATTGTGCTATGATGTTGGCTTCTAGTTCATGACATGGGTCCTATGATGTTTGATATGTTTTATCTTCCTTATTATTCTTGGCTTCAAGGTTGACATGTTTGTATATGTTTGTGCAAATACCTTGTTTGGAAAGAAAATAAAGGCAATGTAAGGAATAACATCCCAAAGACTTGAACTCTGTTTGATCTTCAATATATCTAAGTCTTCAAAAAAGAACTTTTATACTACTTTTTTCTTACTCTTGCATAGTTACATATACTCAATAATGATAATCTCATATTAATTGGTCTGTAAATAACAAAAACACATATTCTGTACTACTTTTTCCAGGCGATGATTGACAAATTCTCATCCATATCTACTCGAAAGCTACCAAAAGCAATGTCTGTGCTAACTCGTAAAAGTATGGTCGCAATCAGCGACTACGGTGACTACCAAAAGATGGCGAAGCGTAATATTATGATTGGCATGTTAGGTTTTAATGCACAGGTACAAATCTCAGCAAAATTTAAATTCAATAGTGGATTTTGGGTACCATTAGCACTCAGTTAATTGAGCTCTAACAATGAAATGCTTGCATAAATTTCAGAAACAGTTTCGCGGTACAAGAGAGAGGATGATCAGTAACGTGTTAAGCACTTTGCATAAGTTGGTTTCTCTTGACCCACATTCCCCTCTGAACTTCAGGGATGTTTACATTAATGAGCTGTTCAGCTTGTCCTTGATCCAGGTTTGTATTACCTCTGAACTTGAACTCTCCAGTGGTCCGTTTGTTACTTCCAATACCTGTCATGATTGTTATGAACTTATAATTGTTGCAATTTCGTAGTTACTAGGACTGATCTTGATTGTTATGAACTTATATATATTTGTTACAATTTCAGAGTTTAGGTGAGGATGTGAGTTCAGTTTATGTGGAAGAGTTTGGGAGGGAGATATCCAAGGACGAAATCTTTGATGTCCTTGTGCATGAGATGATGATGTGTGCAGTTGAGGCTGACTGGAGGGACTACTTCCCCTACCTCAGCTGGCTTCCAAACAAGAGCTTCGACACAATTGTGTCTACTACAGAATTCAGACGAGATGCTATCATGAATGCATTGATCAAGAAGCAGAAGGAGAGGATTGCACGCGGAGAGGTGACACAAAACTTCTATTCGTATCCAAAAATAACTTTTTTTTTCTGCAGATCATCTGAACTGAACTGTAACGTATTGCATGCAGGCAAGGGCATCCTACATTGACTTCTTGCTGGAAGCTGAGAGGAGTGCACAGCTGACAGATGACCAACTGATGCTGCTGCTGTCGGAGTCCATCCTGGCTGCAGCTGATACTGTCCTGGTGACCACCGAATGGACCATGTATGAGATTGCCAAGAACCCTGACAAACAGGCAAGAAATTAACTGATACTACCTCCAGTTTTATTTTTTGGTTTCGGACAACACATGTTTTAGCATGTTTTCTTTGTAACTTGTCGTAAACGTCAATTAATTTTGTCCGGAGGGAGTACTTTCAATTATCTTTTGTATATACTCTTTCTTGTATTGTATTGTGATCCTCTGACATAACTTTCTCTTGATATGGTCATTGACATGTCAGCGATCATGTCTCTATAACTTTACGAGAAAGAAAGTCAGAGGATCTCAATCCCTCTTTCTTTCAAATGCATTTCAGCATTTTGTTGCCAACCAAACTAATAAACAATTGATTGTTTCTTGTTCTTGGCACATCGATCAGGAGCTACTCTACCAAGAGATCCGAGAGGCGTGCGGCGGCGAGGCGGTGACCGAGGACGACTTGCCGCGGCTGCCGTACCTCAACGCCGTGTTCCACGAGACGCTGCGGCTGCACTCCCCGGTGCCGGTGCTGCCCCCGAGGTTCGTCCACGACGACACCACGCTCGCCGGCTACGACATCGCGGCGGGCACCCAGATGATGATCAACGTGTACGCGTGCCACATGGACGAGAAGGTGTGGGAGTCGCCGGGGGAGTGGTCGCCGGAGAGGTTCCTCGGCGAGGGGTTCGAGGTGGCGGACAGGTACAAGACGATGGCGTTCGGCGCCGGGAGGAGGACCTGCGCGGGGAGCCTGCAGGCGATGAACATCGCGTGCGTCGCCGTGGCGCGCCTCGTGCAGGAGCTCGAGTGGAGGCTGAGGGAGGGCGACGGGGACAAGGAGGACACCATGCAGTTCACCGCCTTGAAGCTTGACCCGCTGCATGTCCACCTCAAGCCCAGAGGAAGGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021011