BGIOSGA021014

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021014| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021014, complete gene.| tag = OsI_234...")
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Gene Name

BGIOSGA021014

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021014, complete gene.

LocusTag

OsI_23416

Ensembl Transcript ID

BGIOSGA021014-TA

Ensembl Protein ID

BGIOSGA021014-PA

Length

5777

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22676299..22682075

Sequence Coding Region

22681982..22682075,22680805..22680888,22680095..22680150,22679906..22680004,22679720..22679779
,22679309..22679420,22678966..22679171,22678541..22678669,22678223..22678360
,22677538..22677688,22677104..22677186,22676899..22676946,22676739..22676792
,22676567..22676650,22676299..22676484

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22676299..22682075 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22676299..22682075 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGAGTTGAAGAGGCTTTACCTGAGACCTCAACAAGTGGCTGAAGAAGAAAATGAAATACATGTTGGTTATGAGGATGATCAGTTTGGAGGTTGCTCTTGCTGGGCATCAAACATGGGTCTGGTGAAGGATGGCGCCGCCGATTTGGAGGAGGGGACCCTGGAGATCGGCATGGAGTACAGGACTGTTTCTGGTGTGGCAGGACCTCTGGTTATCTTGGATAAAGTAAAGGGCCCAAAGTACCAGGAAATTGTAAACATCCGATTGGGAGATGGCACCACTCGCCGTGGCCAAGTTCTGGAAGTTGACGGTGAAAAGGCTGTTGTGCAGGTCTTTGAAGGCACTTCAGGAATAGACAACAAATATACCACTGTGCAGTTCACAGGAGAGGTCCTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGATCTGGAAAACCCATTGATAATGGCCCACCTATTTTGCCAGAGGCCTACTTGGATATCTCTGGAAGTTCAATTAATCCCAGTGAAAGAACCTATCCAGAAGAGATGATCCAAACAGGGATATCAACCATTGATGTCATGAACTCCATTGCTCGAGGCCAAAAGATTCCCCTCTTTTCTGCTGCTGGTCTTCCTCATAATGAAATTGCTGCCCAAATTTGTCGTCAGGCTGGCCTTGTGAAAAGCTTGGAGAAAGGCAAGCATGCAGAGGGTGGTGAAGATGACAACTTTGCTATCGTGTTTGCTGCTATGGGAGTGAATATGGAAACAGCCCAATTCTTCAAACGTGATTTTGAAGAGAACGGGTCAATGGAGCGGGTCACCCTTTTTCTGAATCTGGCAAATGATCCCACCATTGAACGTATCATCACCCCTCGAATTGCACTGACAACTGCAGAATATTTGGCATATGAATGTGGGAAGCACGTGCTTGTCATCTTGACAGATATGAGTTCATATGCAGATGCGCTCCGTGAGGTATCAGCAGCCCGAGAAGAAGTGCCAGGTAGGCGTGGGTATCCTGGATATATGTATACTGATCTGGCAACCATATATGAGCGAGCTGGGCGTATTGAAGGAAGATCAGGCTCCATTACCCAAATTCCCATTCTAACAATGCCTAATGATGATATTACACATCCAACTCCTGATCTTACGGGGTACATTACCGAAGGACAGATATACATTGACAGGCAGCTGCATAACAGACAGATATACCCACCCATCAATGTCTTGCCATCTCTCTCTCGATTGATGAAGAGTGCTATTGGTGAGGGTATGACCCGTCGAGACCATTCAGATGTGTCTAACCAGCTTTATGCCAACTATGCAATTGGGAAGGATGTCCAGGCCATGAAAGCCGTTGTGGGAGAGGAGGCGCTCTCTTCTGAGGATCTGCTTTATTTGGATTTCCTTGACAAATTTGAGAGGAAATTTGTTACACAAGGAGCATATGATACAAGAAACATCTTTCAGTCACTTGACCTAGCATGGACATTGCTTCGCATATTCCCTCGTGAGCTTCTCCATCGTATCCCTGCGAAGACATTGGATCAGTACTACAGCAGAGATGCTACCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MGELKRLYLRPQQVAEEENEIHVGYEDDQFGGCSCWASNMGLVKDGAADLEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKSLEKGKHAEGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRSGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLDFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDATH</aaseq>

Gene Sequence

<dnaseqindica>1..94#1188..1271#1926..1981#2072..2170#2297..2356#2656..2767#2905..3110#3407..3535#3716..3853#4388..4538#4890..4972#5130..5177#5284..5337#5426..5509#5592..5777#ATGGGGGAGTTGAAGAGGCTTTACCTGAGACCTCAACAAGTGGCTGAAGAAGAAAATGAAATACATGTTGGTTATGAGGATGATCAGTTTGGAGGTGATGTTTAGGAGGCGCCAACTATGACAAGCGAATGGTCTTTCATAGAACACATATGGCTCTGACATGGATTCATATCCATTGACCGTTGAGTAGGCAAATAACATATCATATAAAATGTATTTAGAGTTGTATGTTTCGTGCATAGCATAGGTTGGATGGCTAACGTAAACCCAAAATTATCCTCAGACACGAAATCACGATAGTAAATTCCTTTGAGGAAAAAAAGAGAGAAATTGCAACAGTATTATATATAAAATACCACTCAACATTGAAAATATCAGGTTGGGGCGCATGACTGTATCAATCAATGCCTACTAATATGATTCGTGTTATTGTCCGTGTTAGTGTTAGTGTTAGTGTTGGATCCCTTCACGAGGGGTGTATTTAGAAATCCGGTATTTGTTCAGGGCTAAACTCGCAAAACTACCCACCCCTCCCCCCCCTCTCAACGACACGACGACATCCGCTTGTATTTCTTTCGTTTAACTTCGTTCTCTCCTCTCCTCTTCCTCCCCCCACCCGCCTCGTCGCCGATCCGATCCGCCTCCGCCTCCGCCTCGCGGCCCGGCCTGCCTGCCTCGCCGCCGGTGGTCCCGATCCGAGGTAAAGCTTCGTCTCGTCTCCCTCTCTCGCGCTTCCGGTGCCCCGCCGCCGGCCAAAATCCCGCCGCGCCGCCGCCTCTCAGCCTGTTTCCCGGCGGATTAGGGCGAGTCCGATCCGTGTGCCTGCGTCCCTGCGTTGATCTCCGTCCTCGCGAGAGCAGCCTCGCCGGCGCCCTGCTGCTTCCCGCCGCATCCTCGCCGTTGGTGCCACCCGTGCTTTCCCCCATCCCTCGCGTCGCGCCTCTCTCTCTCTCTCTCTCTCTGTGCCTTATCGTGAGCTTCTCTTCTAGATCTGGGGGCTTCTCTCTTTGCCTTAACCGAATTGGTGAGGTCTGCCCCCTGATTCAGGGGGGCGCAGGGCGGAGAGATTGGCTGAGAGGCTTTTTCGTTGTTGTCGGTGGATTAGGATGATAGAGCGATCGATCTCGTTAGGCTAATAATTTGTTTGATCCGATCAGGTTGATTGATGGTGTTTTACCTGCGTGCAGGTTGCTCTTGCTGGGCATCAAACATGGGTCTGGTGAAGGATGGCGCCGCCGATTTGGAGGAGGGGACCCTGGAGATCGGCATGGGTGAGTAACGAGATCGGATCCATTGCGTTGTGCTTTTGCGTGATCAGTGGCCTGTGAGTTTTGTGTTTTGCTTCCGGGCTTCTGGCGGCGTACTGGTGCCATTGCAGCTGAACAGTGCCTGCATTGGCACTGGCATGCCAGATTTTTTGTTATGAAAAAAAGGAGCCTGGTTAAACTTTTCAGAAGTTCAGCAAATTGTTTGTGAGGGTCCAATCTTAATGTTTGATCATTGGATGCTGTGATAGCTTAGTTACCCGCTGAATGAAGGGTGGAAATATTGGTGTACAGATACTTAAAATTGCTGGTTATCCTATTTATAATGCTATGCTCACAGTCAGGTTTTGTTCAAGTACTTAACCTAATGTGCCAATCATGATCGGCCCTATTCATTGTCGGCGTTACATTGCAGTTTTAACCGTGCAACACTATGTCATGTCCTTATGTCTTAAGTTTACCATATTCTTTTGTTTGCTTACTATGTTGATTTGCTGTGATTTATAGCACATCTAAAAGTGCAAATTTCACAAAAGCACCATTCATTGTGGTATAGACACTGTTCCAGCTTTCCAGTCTTAGTCATAATGTTGTGATAACAGCAACCTTTGTCAAACGGCCTAATAAAGATGTTGCATACTTTCTTTTTTCAATTTGCAGAGTACAGGACTGTTTCTGGTGTGGCAGGACCTCTGGTTATCTTGGATAAAGTAAAGGTACGTGCTACTGTTCCTCTACAAATTTTCAACAGACTAATCTGGTAGCAAGTTATACTGAGCATTTCTTTCTTCATGTAACTTCTTCAGGGCCCAAAGTACCAGGAAATTGTAAACATCCGATTGGGAGATGGCACCACTCGCCGTGGCCAAGTTCTGGAAGTTGACGGTGAAAAGGCTGTTGTGCAGGTTATCATTTTTCTATTTTTATGAATATCTTTTTTGCTTGAGATTGTATTCAGATTTGCATTTACCCTATGATAGTTCCATTATCCAGAGCACTTACGTTTTATTACTGACTTACTTGATTTTCAGGTCTTTGAAGGCACTTCAGGAATAGACAACAAATATACCACTGTGCAGTTCACAGGAGAGGTAATTTCCTCTTATTCATCTCTTCCTCCTTTTATCTTCACTTCCTGGTATCCATAGTGATTTAAGTGTTCTAATAGGTTAATCACTTTGAGCTGAACAGTGTTAATTTGGAGAATGATTTCACTTTTGGTTGTAATTGATAAAACAAAGGAGTATCGACAAAGCACATGTCATTGTGATTGTCGAGTATTGCATGACTTGAATAATCTATAAGTTTTTGTAGTTTATATCTTTTCCTTGTTTGCATGTAGCACTGAAGTAGCGGCATTGCTTAATATGTGTGGTAATTCTTTCTATAGGTCCTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGATCTGGAAAACCCATTGATAATGGCCCACCTATTTTGCCAGAGGCCTACTTGGATATCTCTGGTAAGTTTTTGCTCAATTCAGGTGCACTGCTATGGAAATTCATAGTTAAGTGCATGTTCTTTTATCAGTACGGATGGTGGCTAAACTTATATTTCTCTTCTGATAATATTAATAATGTCTTCCGATGTTTATTCCAGGAAGTTCAATTAATCCCAGTGAAAGAACCTATCCAGAAGAGATGATCCAAACAGGGATATCAACCATTGATGTCATGAACTCCATTGCTCGAGGCCAAAAGATTCCCCTCTTTTCTGCTGCTGGTCTTCCTCATAATGAAATTGCTGCCCAAATTTGTCGTCAGGCTGGCCTTGTGAAAAGCTTGGAGAAAGGCAAGCATGCAGAGGTAGCCAAGCATTTCTCTCACATAAAGATAATCTGACTATTTGATGACCCAGTGAGATTTGGGCTCACATATATAGCTTAATAACTTTAGTTGTACATGGAATCCTACATAAGTTCTTGATTTGAACATCCTGTTCTTTTGACAATGATTGGATGTTGGCATTATAGTTTTTGAATTTTTATGGAGAAAAATCCATATGGTATGCTGTAGAGCAATTTACCTGTTCATTTTTTTCCATGGAGACATTTTTGCATCGCTGAATCACTGCTTATTTGCTGATTACTTTTAATCTCCAGGGTGGTGAAGATGACAACTTTGCTATCGTGTTTGCTGCTATGGGAGTGAATATGGAAACAGCCCAATTCTTCAAACGTGATTTTGAAGAGAACGGGTCAATGGAGCGGGTCACCCTTTTTCTGAATCTGGTACATATAGCAGACTTTTGAAGTTCTGATTCATACCAATTTGTTATGCATGGAAACTAATTCTGCTAGTGTATATGTGCTTATTTTCTGTATGGTTATATATGCATCATTTTTAACAGAAGTTGACCTGATTGTTAAAGGTAGAACATATTTTCTAACACCAGGCTACTCTGTTTACAGGCAAATGATCCCACCATTGAACGTATCATCACCCCTCGAATTGCACTGACAACTGCAGAATATTTGGCATATGAATGTGGGAAGCACGTGCTTGTCATCTTGACAGATATGAGTTCATATGCAGATGCGCTCCGTGAGGTATTTTGCTTTTTATCTTTTATGATGTTGTATACTTTGTTTCTTTCTGTTTTATTACCTATTCTTAGACCTTAATTTTAAGGAATCATATACTAATTTGATGTCGTTACTTAACTAAAATGTCATCTGTCATCCGTTTGGTTGCAAATTTTCATGTTTGAATGAATTAAAATCATGAAAAGGCACATTTTCGATTACTTCGCAGCATGCATGGCACTTGTACAAACATATGTGGCATCTAGACTGATCACTTTATCAGAAATGACACTAGCTTGGTTATGACAGTGAAAAGTTCGTGCATTTTCATTTGATGATGTCACCGTTGACCAAAATGGCTAAATGTGGATGTTAAAGTATTCATGTTTCTATTTGCTTCTAACAGTGTGTTGTGGTTTTCTCTATCTAAAATGGTAGTATTGCATTTTCCATGTTATACATCTCCTTTTATGTTCGACTGCAATAAATGATAAATTGCTGAAATTTTATTTATTGTGATTGGCACTAATACAACACGGTAATTGTGCTTATATGTAGGTATCAGCAGCCCGAGAAGAAGTGCCAGGTAGGCGTGGGTATCCTGGATATATGTATACTGATCTGGCAACCATATATGAGCGAGCTGGGCGTATTGAAGGAAGATCAGGCTCCATTACCCAAATTCCCATTCTAACAATGCCTAATGATGGTAAGTGACTGTTTTTGTTGATTTATTTCAGTTTTATATCACCACCACAACTATCTTGAGTATTCTATAAACATGTTGCGTATAAGATTTTTCCTGAAGTATGTGAAGAGTATCATCATATCAGATGTATTATCTGCCGCAGCCTTCTACTTCCCATTTTGTGTATTAAGATTTTGTCTACCATAGAAAGTAATGTGCATGAATATATGCACTAGCCCAGCATGAACATCCATGAGTTGGATGCAAGTTACTTGCGTTGGATCTTTACCATTTATGTTATTACCTAATGTGTGCTTTGTTTAGTCTTAAACAATAAATATGTTTAACATTGTGCTGTTTCATCCTAAACAGATATTACACATCCAACTCCTGATCTTACGGGGTACATTACCGAAGGACAGATATACATTGACAGGCAGCTGCATAACAGACAGGTACTTTCTTTTCTGTTCTTTTATTGAGTAGCAAAGATTTTCTTGGTAAGAGTAACTGGCTGCTTCATACTCCACCTCAATATTATGACACATGAATGTAACTTAATAGATCTTCTATATTTTTTACTCTACCTCAATATTTTCTTGTTACTTTCAGATATACCCACCCATCAATGTCTTGCCATCTCTCTCTCGATTGATGAAGGTGAGATTACTCATCAATATAAATTTCACATAAACTGGTTTCATAACAGTTACATGCTACAATAATTTCCATTTGCGTTCTAAGAACTGTCTAATAATTCTTGCAGAGTGCTATTGGTGAGGGTATGACCCGTCGAGACCATTCAGATGTGTCTAACCAGGTAAACATTTGGACTCCATACATTTGATTTCATTTAAGCTATGGCAAATACTTACAGTGGAGCTCATTTATGCTGTTTCATGTTACAGCTTTATGCCAACTATGCAATTGGGAAGGATGTCCAGGCCATGAAAGCCGTTGTGGGAGAGGAGGCGCTCTCTTCTGAGGATCTGGTTTGTCACTAATAACTATTGAAATAATCCCATGCTGATGTCTCTTTTAGAAGTAAATTTAATATTCTATCTTTATCTGCAGCTTTATTTGGATTTCCTTGACAAATTTGAGAGGAAATTTGTTACACAAGGAGCATATGATACAAGAAACATCTTTCAGTCACTTGACCTAGCATGGACATTGCTTCGCATATTCCCTCGTGAGCTTCTCCATCGTATCCCTGCGAAGACATTGGATCAGTACTACAGCAGAGATGCTACCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021014

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021014&oldid=43539"