BGIOSGA021021

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021021| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021021, complete gene.| tag = OsI_233...")
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Gene Name

BGIOSGA021021

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021021, complete gene.

LocusTag

OsI_23399

Ensembl Transcript ID

BGIOSGA021021-TA

Ensembl Protein ID

BGIOSGA021021-PA

Length

6349

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22470167..22476515

Sequence Coding Region

22476439..22476515,22474638..22474837,22471730..22471849,22471288..22471446,22470958..22471160
,22470167..22470262

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22470167..22476515 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22470167..22476515 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCACGGCGGCGGCAACAGCAACAGCAGCAGGTGAAGACAATGACGAGGCCAAGGAGATGTACTGCAGAAGTAGTATGATAGAAGATGCTGAAAAGAGGGGCTCGATTTCACCCGGAGATACACTAATCGAGGCAACAAGTGGTAACCTTGGGATTGGTTTGGCCGCTGTTGCTATTCAGAAAGGTTACAAATTTATTGCTGTAATCCCTAATAGCTATCCACCTGATAAGCAGAAGTTAATAAAGTATTTGGGCGCCGAAGTAAGAATAACTGAAGGTCCATATAGGAATATGGAGAAAAAGGTGGAGGAACTTAAAAAAAGTATAAAAAATTCTTATAATCTTGATCAGATGGTCAATGAAGCAAACGTAGAGGCACATTATAAGTGGACAGGACCTGAAATTTGGAAAGATACAGCAGGCAAAGTGGATATTTTTGTGACGTCTGTCGGTTCAGGGGGCACATTAGCAGGAGTAGGAAAGTACCTAAAGGAGAAAAACCAATCTATAAGGATAGTCGCCGTGGAACCTGCGGAAAGCCCCGTACTGTCAGGTGGCAAAGCCAGCAAGCACAGGATCCAGGGCATAGGGGTGGGTTTTGAAACAGAAATTTTGAAGGCACATAAACCTATTATTACCTATGAAGTGAAGACAATATATAGTGAGGATGCCATAACAAAAGCGAGGATGCTGGCCAGGGAGGAGGGGTTGCTTGTTGGTATTTCTGCTGGCGCAAATATAGCTGTTTGCTTGGAGCTTGCGGCGAAAGAGGAGAACAAGGGGAAGATGATCGTCACCATGCTCCCAAGCGGCGCCGACAGATACCTAAGCTCCGATCTCTTCAAGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MGTAAATATAAGEDNDEAKEMYCRSSMIEDAEKRGSISPGDTLIEATSGNLGIGLAAVAIQKGYKFIAVIPNSYPPDKQKLIKYLGAEVRITEGPYRNMEKKVEELKKSIKNSYNLDQMVNEANVEAHYKWTGPEIWKDTAGKVDIFVTSVGSGGTLAGVGKYLKEKNQSIRIVAVEPAESPVLSGGKASKHRIQGIGVGFETEILKAHKPIITYEVKTIYSEDAITKARMLAREEGLLVGISAGANIAVCLELAAKEENKGKMIVTMLPSGADRYLSSDLFKY</aaseq>

Gene Sequence

<dnaseqindica>1..77#1679..1878#4667..4786#5070..5228#5356..5558#6254..6349#ATGGGCACGGCGGCGGCAACAGCAACAGCAGCAGGTGAAGACAATGACGAGGCCAAGGAGATGTACTGCAGAAGTAGGTAGGAGGAGGCGGATGCGGTGGGTGGGAGTGGGGCGGCAGGGAGCAGTTGAAGAAGATCCATCGGCCCCCAACCTCCACGTCGGCTAGATCCAGTGGCCCACACCTCCACACCGGCGGCCATAGAGGAGAAGTGGAGGGGTTTTGTAGTAGCGATGTAACTTCGTATGAAGGAGTCATGATTTTTTTTATGAAATAGTATTGCTCCCATTTCTATATGAAGGTTCTCTTAAGAAACTGCAATTAAAAAACAAATTTTGTACTCCTTTTCTTAAGAGAACAACCAGCAAGAATCGTTTTTCATTGGCACTTTTCTTAAAAAACAATGATTTTCACAAGTCCTTTCTTATGAATAACATCTCAAAGTAGTGACAGTTATTGAGGGGTGAAAGGGTAAAACAACACCTTAGAAATGTTTATATTTGTGTCTATTTGTAGGAATGTATGCATTTCTAAACGGATGGGGTAGACACCATGTTTGATAAACCCTGAGCTCCACTCGAGACACTCACGGCTATGATTGGCCTGATCTTTCGGTGAATTGAAGATAACTACGATTTGGGAGAAATGTTGACGACCTGACTACACCCATACGAGACGTTGTTGTGTTGTGCCTTAACGATTGATACACCTCTCCGTGGGTTGTTGATCTTGCCGGTGCAGATCAACCTTATCCCCACAAGCAAATCAAAGAAACGAGCAAGACCAAGATAAATCAATCTAAATTGCAAATATAAATTGAATACAAATAAAAAGTTGGGGTTCCGTAATGAGCAAACCGGTGATCTAACCAATCACGGATTACACGACAAAGTAGCGGAGCTAAACTTTAATCTAAACAAAACCCAAGAAACCCTGAAGGGACCTATCTATTTAAGGAGGTGGGAGGACGACCAAGGGGTCTTTAGGGTCGTGCTCCGCCTGGTTGGGGCGCACCCCACATGAGTCCCACTTGGGCCTGGTCCCAGATGAAGTTACAAGCCCATAGACCCATTCTTGGTGATGCAATACATTGTTTCTGTGATTGTGGATGACTGGGATGAAATTTGGTGATGAGGCCAGATCTGTTGGAAAGAGAATTCCAAGATGTTTCTATCAAATACTCATAGACCCAAAATGGAGCACGTATGTACACTTGGCAGCCGTTTAAAATCAACACGGTAGCAGGTGGCTGAATTAGAATCTAAAACTTGGTCAAATGATCTTGATATGAGCAACGGTTGTATTAATAGTTTGCATGGTCACATCAATGTTATACGACACCTTGTTGAAATAATATACAATTTCTCTAGAAAATATATATGTAGTGTAAACTACATATATAGTAGAAACCAGCTGAAAACAGCCGTTAGATCGTAAAATAGATGTATGAGATTTGGAATAAAAGTTTTACTTTTGATGTCGTCGACAAATCTCATATATCCATTTTTTTATCTAACGGTACTTTCTAAGTCTCCTCTGTATGTGATTTGCACGGTACATTTTCACTAGCTGCTCGGGCTAGTACAGTGCATCTTTAAGTACCATATAAGAAATTTGTATGCGTGGACTTCGGATGTTTGTTGTACATTCAGACCCTTTTTTTCTATATTTGCTCTGCAGTATGATAGAAGATGCTGAAAAGAGGGGCTCGATTTCACCCGGAGATACACTAATCGAGGCAACAAGTGGTAACCTTGGGATTGGTTTGGCCGCTGTTGCTATTCAGAAAGGTTACAAATTTATTGCTGTAATCCCTAATAGCTATCCACCTGATAAGCAGAAGTTAATAAAGTATTTGGGCGCCGAAGTAAGAATAACTGGTAAGTGTTAAATACGTACATATACATGCTTGCAGTATGACGATCACTACGGCTGGTTGGTACCTTTCTGCCTGTGCCTTAGCTACATCAAAACTTTTCTAGATCATATTATTATCTTTTACTAGATAAATACATGTGCTTTGTTATGGATAGATATGAATTATACATGACCTAGCATTATTTGGAACAATTGATTGTAAGGTTTTTAGAACAATTCATCCCTATAGATGTCTTTGCATGATGAACTTGTATTTTAAAGATGAAATAATGTTGAACCAATATATATGACTATTTGTAATATAAAAGGAGTAGTTAGTAAAACAAATTAAATAGAGTTTGTGAAGATGGTAGATTAACCACCACCACCATTACATTCTTTTTAGAATAATATAGATATAGATAATGGTGGTGTGATCCTTTCGAGGTTGCTCCATTTCTTAAAAACAACAACAACAACTACCTCTAGCCACAAATAAATGATATTTTAGAGAGTAATTTAGTCACCAAGACATTGTTTTAATTGTTAATTACTAGTATAAAATCTATAAAAAATATAGCAAAGTCATAATATTTTAGAACTACTAAAGACAAATTTAATCAATGCAACAGGACCTGCTTAGGAGGTCTTTACCTAGCACAGGTATTTACACCTAATTAATCCCATGTTTATAAAGATTTTGGGGAGTTTAAAAAGCATGGCACGTAAATGTTGACATTGGATCAACAAGGGTGTTTACAAATCTCTATAAATATTTTAGTTTAAACCTAGCCATACCATTTTCAAAAGTTAAATCGAAATATTTTCCCAGAGATATTGATCGATGATCAAAGTTCAAATGTATTCACTGCATGTATTACAAAATATCATTATTTGTCTAATTACCAAAACAAACACTAAAATAAATGACAAAAACTGAAATGAGTTGACCCACAACTATCCTTCTAGCTGATTATCTATATATGTCGAGCTTTACTATATGCCTAGCAAGTGGGGGTTGAAATTCCTTTCATTCCAGATACTTGCAGCATCATTCCCAAACTGTCGAAGGATGGTTTCAACCATCTCTTCTACGGGGGATTAAGGAGATAAAAAGAGATACATACTAAACACAATATATGCCTTAAACAAACTAATATTTTTTAATTAGAAATCTGATCTATATAAACATTAAATTGTTCACTTATTTAAGCATCCCACCTTGTATGACTACATCAAATACAGTCCACACACACCTCAACAAACAATATAAGATTCAAGCAAGTAAAACAAGTAGAAAAACAACATAAGATTCTAAAGCAAACACCTCAACAAACATACAGTTATCAACTGTAGGACTCTTGCAACAACTAAGTTGATGTTCAAATCGGCAGAATCTGTGGGATTGATGGGTACAGTACCATCATCACCACCTCTCCTCGCGGATCGTTTGTTGTAAGCAGACACTGATACTACTACAAAATGGCAAAACACCAATCCTTAGTGTCTAACGGTTTTATAAGTCAATTTTTGAGATTTAGCTTTGAAGCCATAATCCATTATCAGTGGCTTGCACTAATCTCTTATGATTCATGAACAAGGATAGTTGGAGATTAATGAGGATGTGAATGGTCAAATATATATATATAATACACATCCCATACTAGACAATATAGTTGGCCATGTGGGCCGCCCGGCACGGCACGGCCCAGGCCCGGCCGTGCCTGGGCCGAGGCTTGTCGGGCCGACACGGCCCGACCGACGCACCGGGCCGTGCCGTGCCAGCCCACGTGCCGCACTCACGGCCCAGGCACGGCCCAACACGCCTCGGGCCGTGCCGGGCCGGCCCGAAGGCACGATGGGCCGTCGTGCTTTTCCTCACAATAAGTCTAAATTTCCTCCCTCCTATTGGGCTGTGACATATGTACAGCTACAAAAAGTCTATTTTACCTCCCTCTTCTTTGGGCTGGGGTATATAAATAGCTAAAATAAGTCTATTTAAGGTCCCTATTCTTTAGACAGTTACATTTATATGTCTATTTTTAGTCCCCATACTTTATGTACCGGGCCTAGCCTGCCGGCCCATCGTGCCGGGCCGGCCCGACCATGCCGGGCCAGCCCAGCGTGCCGGTGGGGAGGCCCAGGCACGGCCCGACGGTCGGGCCGGGCCAGCACGGGCCCGACCCAAGTCGGGCCGTGCCGTGCTTGGGCCGGGCCAAAAAGGCGTGCCGTGGGCCGGGCCTTCGGGCCTCGGGCCTTATGGCCAACTATACTAGACAAGAAAGATCGGTCTCTCAGATCGATGGTATAGCTACGTAGTCTTGCGCAAAGATCTAGACATGACCATTTAAAGCACCTAACAAATAGCTTGATCTTAATGACGAATCATTACACATTGATTTTACCCTCTATTCTCACCAAGTTTAATAGTAGAGTTAACTATGAGCTTATAGCTCATATTAAAGTTAACATGTATAATAGATAAGCTATAAGTTTATCAATATCTTTTTCTTTTCTCTCTGTCTCTCACCTATGCATTTAATGTTTCATCTTGAAGTATGTGAATAGCTTGCTCTTGCATGAGAGCTTTTAAATTCTTTCTCCTCCACATAACCTTATAGTTGGCTTATAGTGTATTAAACTTGCTCTAAGGTTGTATCAATTAACCGATAAGATAGCTCTTACAAACATTTGGATATTTTCTTTGTAGGAGTACGAAAAGCTTAAAACATTTCTTACATATACCAGCTAAAGTTGAGCATGTTTTTGGTTGCATTGATCGTATGGACTTCTCTTTTCAATTTTATGCAGAAGGTCCATATAGGAATATGGAGAAAAAGGTGGAGGAACTTAAAAAAAGTATAAAAAATTCTTATAATCTTGATCAGATGGTCAATGAAGCAAACGTAGAGGCACATTATAAGTGGACAGGTATTCCCTTCGAAAACCTACTCCTTTTATTCACAGTATGTTGTAGTTGTGGTTTTTTGCTTAGTTTTTCTAATTAATTGTGTATTGTAAGGCTTAGTCCCATTTCTCCTAAAATAAGACACCTTCTTCTTATAAAAAATACGTCGGCAACGACTGGCCTAAAAAAATTTATGATTGGATTATAAAAATATTACAACACAAATTCGATAGTAATAAGATATATATATAACACAAACAACAAAACAACCGCAAACTGATGGTTATATCTCTCTTTTGGAAACAGGACCTGAAATTTGGAAAGATACAGCAGGCAAAGTGGATATTTTTGTGACGTCTGTCGGTTCAGGGGGCACATTAGCAGGAGTAGGAAAGTACCTAAAGGAGAAAAACCAATCTATAAGGATAGTCGCCGTGGAACCTGCGGAAAGCCCCGTACTGTCAGGTAATTCTATGTACGCATAGATAACATATTTTTTTCTCTCCCCTTTCTAGTAATATATAAATAAATGGCATTTACCCTAATACAAAATCACCACAACTAAGTAGCAGTTTAATTTGGCTCTGTTTAGGTGGCAAAGCCAGCAAGCACAGGATCCAGGGCATAGGGGTGGGTTTTGAAACAGAAATTTTGAAGGCACATAAACCTATTATTACCTATGAAGTGAAGACAATATATAGTGAGGATGCCATAACAAAAGCGAGGATGCTGGCCAGGGAGGAGGGGTTGCTTGTTGGTATTTCTGCTGGCGCAAATATAGCTGTTTGCTTGGAGGTAAATGCTCCCGATCAACTCTGTTCTTTTTTACTTGTCTTTTATTATGTCGGCATGGTCTCCAATATGTGAAGTTACTTCTCTATATGTGTGAAGTTACTTCTCTTTTTTTTACTATATGGTCTCCAATGTGTGAAGTTACTTCTCTACATGTTTCATTGGAGGTAAATGCTCCCGATCAACTCTGTTCCTTTTTACTTCTCTTTTATTACATATACCAGCTAAAGTTTGCACCAACGATGATGTTTCTTATTTCCCCTAATGAAGGATGCTCCCAATCAACGTTACACTCCTAATTTTACTTACCAATACATACCTTATATTATTTGTAATAATATGATCAACACTCCCCTGTTCTAAATTATTTGTCGTTTTAGTTTTGTACTAAATCATGTGTTCCAAAGTTTAGCAATTAGTTTCTAAAAATTCATATAGTTGAACAACATGTGAGCTATATACTAGTATGAAAGTATTTCTTATGGTAAGTTCAAAAATATGAATATTATGATGATAAACTATATAAATTCTAGAAAATAAAAGTCAAAGTTAGAAATATTTGACTTCATACAAAGCTAAGACAATAAATAACTTGAAACAGATATGGAGTAAATAAAACTGTTCATGTGGACCATGCGTCCATGCCTATCTATGTACTACTTGTGGATCGATCTTATGAATATTCGTGGATGACACAGCTTGCGGCGAAAGAGGAGAACAAGGGGAAGATGATCGTCACCATGCTCCCAAGCGGCGCCGACAGATACCTAAGCTCCGATCTCTTCAAGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021021