BGIOSGA021023

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021023| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021023, complete gene.| tag = OsJ_217...")
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Gene Name

BGIOSGA021023

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021023, complete gene.

LocusTag

OsJ_21715

Ensembl Transcript ID

BGIOSGA021023-TA

Ensembl Protein ID

BGIOSGA021023-PA

Length

7050

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22453731..22460780

Sequence Coding Region

22460670..22460780,22460208..22460335,22459823..22460025,22459467..22459592,22459137..22459224
,22458101..22458167,22456929..22457264,22453974..22454189,22453731..22453856

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22453731..22460780 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22453731..22460780 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGCGGCTGCGGCGGTGGAGGTGGAAGAGGGGAGGACGGGGATCCCTTCTCTGCTGCGGCTCTCCGCCGTGGGGGAGGAGGCCATCGCCTCCAATGTCGCTCAGCTGATAGGCTGGACGCCACTGATTGAGATGAAGAACATCGCCAAGAAAGAAGGCATCCAAGCTCGTTTGGTTGGAAAGATGGAAGCATACCAACCCCTTTTCTCGGTCAAGGACAGAACTGCTCTCGGTATGGTTGAAGATGCAGAGGAGAAAGGCTTGATTACACCTGGTGTTACGACGCTGATTGAACCAACTGGTGGTAATCTTGGTACCGGTTTGGTATTGGTTGCTATTCAGAGAGGCTACAGGTTCATTGCTGTTATGCCTGCTGGATATTCACTTGACAAGCAGATGCTACTGAGGTTTTTGGGTGCTGAAGTGATATTAACAGATCCTGCAGGTGGATTCAAGGGTATGATGGACAAAGTGGAAGAGCTCACCAAGGTCATGCCAAATTATCACTGTTTTAACCAATCAATTAACCCAGCGAACCCAGATGCACACTTCAAATGGACTGGACCTGAGATCTGGAAGGATACAGCCGGCAAAGTTGATATCTTTGTAACCGCCGCTGGAACAGGGGGCACACTGTCAGGTGTAGGAAGAAATAAAAATACGGGGAAAAGCAGTGCTTGCAAGGGTTCATACACTGACTTGAGAAACATGACAAAGCAAACTGAAATAGCATCGGAGGGAAGAGGTCCAAACCTGCAAGCCTGCATACTGCCTCATCTCAAGTCCTCATCACCTTCATCGGTGCCTCCTACTGCTTGGGCTCTGCCAGTCCGGAAGAGCAGTGGCAGTCGGCGTGAAAGCCAGGAGGTGGGAGCATCGGGGGCAGCGACGGACGGGCCGACCGGCGGCTGGCTCCTCTTCTCCCCACCTCAGCCCCAGCTCTGTCCTCTCTGGCGGTGCTTGGTTGGAGTGGAGGTTGTCCGAATAGCTTCTCGATCCCAACGGAGGAGCCGAGAAAGGAGAGCAGCTCTTCGTTCTGGAGGAATCGTCGTGCACCATTGCTTGATTGATTCAGGTGGTTCACCAGGTTTTCACAAGATTCAAGGCACTGGGCCAGGTTTCATACCGGAAAATTTGGATAGATCTATCATCGATGAAGTTGTGACCGTAAGCTCGGAGGAATCCATAACAATGGCCAGAAGGCTTGCAAAGGAGGAGGGGCTGCTTGTTGGCATATCTTCTGGTGCAAATGTGTCTGCTTGCATCAAGATTGCAGCTAGAGAGGAGAACAAGGGTAAGATGATTGTTACAATGCTGCCGAGTGGGGGTGAAAGATACATGAACTCTGATCTCTTTGCAGATGTAAGGGAGGAATGTGCTAATATGACCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAMAAAAVEVEEGRTGIPSLLRLSAVGEEAIASNVAQLIGWTPLIEMKNIAKKEGIQARLVGKMEAYQPLFSVKDRTALGMVEDAEEKGLITPGVTTLIEPTGGNLGTGLVLVAIQRGYRFIAVMPAGYSLDKQMLLRFLGAEVILTDPAGGFKGMMDKVEELTKVMPNYHCFNQSINPANPDAHFKWTGPEIWKDTAGKVDIFVTAAGTGGTLSGVGRNKNTGKSSACKGSYTDLRNMTKQTEIASEGRGPNLQACILPHLKSSSPSSVPPTAWALPVRKSSGSRRESQEVGASGAATDGPTGGWLLFSPPQPQLCPLWRCLVGVEVVRIASRSQRRSRERRAALRSGGIVVHHCLIDSGGSPGFHKIQGTGPGFIPENLDRSIIDEVVTVSSEESITMARRLAKEEGLLVGISSGANVSACIKIAAREENKGKMIVTMLPSGGERYMNSDLFADVREECANMTF</aaseq>

Gene Sequence

<dnaseqindica>1..111#446..573#756..958#1189..1314#1557..1644#2614..2680#3517..3852#6592..6807#6925..7050#ATGGCGATGGCGGCTGCGGCGGTGGAGGTGGAAGAGGGGAGGACGGGGATCCCTTCTCTGCTGCGGCTCTCCGCCGTGGGGGAGGAGGCCATCGCCTCCAATGTCGCTCAGGTATGTCATAGTAATGGTCAGTCGAGGAGTTGGTTGCAAACGCAGAAGAATAACAACGTCACACCCTTCTTGTACGGCAAAGAGATATATAAAGGAAATAAAAGAATATTCAGAAAAGACTAAAAGTCCTACTTAAATAGTTATAAACCGAATAAGTTATATACTAAAATTTGGATCACATATTAACACTCTTGTTTGCTTACTGTGTGTTAGTGTTCTTGTTGAGAGCTTCATTGAGCTATGCATTTGGTGAGGAAAGATCACGGTGAGGATTTTTGGGGAGCTAATATGATTAGGGACTTACATGTTTGTGGTTAATCTTTATTATTGACAGCTGATAGGCTGGACGCCACTGATTGAGATGAAGAACATCGCCAAGAAAGAAGGCATCCAAGCTCGTTTGGTTGGAAAGATGGAAGCATACCAACCCCTTTTCTCGGTCAAGGACAGAACTGCTCTCGGGTGAGTAAGCACAGATTCATACATCGCATTATTTCTTCAGTTATATATGCCCTTTTTTCCACAGGAAATCTGCTATGCTTCGCTCCATTCCTAGCATCTTACCATATACTCAGTTATGTGATGAAGAATATGCAAGCCATGTGGTTAACCTTAACTGGAATTTGCAATTTTTTTGTGTGCAGTATGGTTGAAGATGCAGAGGAGAAAGGCTTGATTACACCTGGTGTTACGACGCTGATTGAACCAACTGGTGGTAATCTTGGTACCGGTTTGGTATTGGTTGCTATTCAGAGAGGCTACAGGTTCATTGCTGTTATGCCTGCTGGATATTCACTTGACAAGCAGATGCTACTGAGGTTTTTGGGTGCTGAAGTGATATTAACAGGTGACAACCAGGATCTCAGATGAAATTCAGCAAGCATTTAAATTTCTCATTTAGTTTTTTGGTACAAAACATATTTTCTGTTATGGACTAAATTTTGTGAATTTCTTGTGCTTATGTTATTGTGTTATTGGTTACATAATTATGTTAAATCAGTTACTACTACTCTCTCTCTTGCATATTAAGTGTCCTCTGACAAGTTATTAAGTAATGCATGTTTTCTTTTGCTGCAGATCCTGCAGGTGGATTCAAGGGTATGATGGACAAAGTGGAAGAGCTCACCAAGGTCATGCCAAATTATCACTGTTTTAACCAATCAATTAACCCAGCGAACCCAGATGCACACTTCAAATGGACTGGTAAATAATTCTGGAAATCCACACTTCAGTGATATGCAAAGTTTTTTTCCAAACTTCCAACTTTCCATCACATCAAACCTTTCATACACACACAACTTTTCTATCACATCGTGATAGAAAACTTTCAATCAAACTTCCAAACTTCAGTGTGAACTAAACACAGCCTCACAACAATGTTTTATCATCTACTGTCCATAACTTTGCTTTATATGATACACATGTTCATTTTCTGAAAATGTCAGGACCTGAGATCTGGAAGGATACAGCCGGCAAAGTTGATATCTTTGTAACCGCCGCTGGAACAGGGGGCACACTGTCAGGTGTAGGAAGGTACCTGAAGATGAAAAATCCATCTATAAATATAGTGTGCGTGGAACCTTCAGAAAGCGCTGTAATTTCAGGCAATCTGACAATATTGTGTAGTAGCAGTTCCAGTGTTGCAACATAATAATCAGAAGTAACCTGATGTTGCGTAACTGTAGCTATTCATGTAAGATTGAAAAATAAATAAGAAGGAAAGAAAGAGCTGCTTACTTATTTTTATATAATGGAACTAGCATGGTTGCCCGCGCAGATTGCGCGGCTAGCATCATTATATCTTCTATCGTATAATAGCATATATATTTTTTCTCAACTTATTATTAAAATATATTAAAATGACAACATAGTTTTAAATTTTGTACTAACTTTACCAAATTACCAATGTGTAATATTCATACTGTATTTTATTTATATGTGATACTTATTAATTATTTTTAATATCAAATTTTAGTTATTTCTAAATTATATTCCTATATGGCTTGCAGACTCGTCTTCCAACATTCCTTATTTTTTTAGTTCTGAATTTTCATTATTTGTAAATTGTATTTATATATAGACTCTAAGCTCTTCTTCCAATATTATTTATTTCTAATTCTGAATTTTCATTATTTCTAATTGTATTTCTATGTGGACTCTAAACTCATCTTTCAATATTCTTTATTTTTTATTTCGAATTTCAGTTACTTCTAAACTGTATTACTCTTCTTGCCATATTTTTTTATTTTGAATTTTAGTTATTTGTAAATTGTATTTCTATATGGACTTTAAACTCTAATTTTAATTTTATTATTTTTATTCCGAATTTTAGTTCATTCTAAATTCCTATATGGACTCTATGCTTTTCTTATAATATTCCTTATTTTTAATTCCGATTTTCTATTATTTATTAATTGTATTTCTATATGGACTCTGTGTTTTTCTTATAACTAGTAATAGTGCACGTGCAAGGCACGTTTTTACAATATATATATTTTAAAGAAATAAAAATACGGGGAAAAGCAGTGCTTGCAAGGGTTCATACACTGACTTGAGAAACATGACAAAGGTATGTCCACATACTGACTTCAGGTACATTCCATATTCACGTTCAGATAACCTTGAATGGTAATAGTAGTATATTGTTTACACACATTGCAACGGCCAAGGTTAGACACTAAACCGAGACAACCTTACATTGACTGGTAATTTTGTAAACTTCCAGAACTTGAGCTATAAGAAATTCATAGTATTAATTAGCTCACAGCAAATTAAAACAAATACATCCATCGCTTAAATCAATTTTGACCATACAGTTTTTTATCATCTTTTGAAAAGGGACATCTATATTCATATCAAAATTAAAGGAAGATGTAACCTACTAATTTGTGACATGTGTGCAAGGCACAATGCAGATTGGATCCCTTAAGTTGTAAACATTGCAATAAAATAATCCAATGTAATAAAGGAATCAAGGTGCACAGGGACATTACTTATCAGCATAGGTTGCAACAACACAATAACTGGAAGAGATTAATGTAAAGCTTGTTAATTCAGGCCAGCATTAAAATATTTTGCTTCTCCATGTTAAGTACAGTGGTTTGGTGAGAATCTCAGTTGATAATCTTCTGAGCGAGTAACCCAGTTGTTCATCTTGGAACAACCCATGTTCCACTATATACATACAACCTTCATTCAATCAGTTATGTAACACAAAATTTACTGAAGTAATCGATCATCTGTTCAGTCACAAGATATGAACAAGAGTACAAGAGTAGGTAATAATAGGAATCGAGACAAACCTGATTTGAGCAATTCCTGCTGCAAGAAGGGACCTGAAGAAATTAACGCCTAATTTGCATCTCTGAACGGAAAGGATCTTCAATTAAACATGGGTTTCCGCAGCAAACTGAAATAGCATCGGAGGGAAGAGGTCCAAACCTGCAAGCCTGCATACTGCCTCATCTCAAGTCCTCATCACCTTCATCGGTGCCTCCTACTGCTTGGGCTCTGCCAGTCCGGAAGAGCAGTGGCAGTCGGCGTGAAAGCCAGGAGGTGGGAGCATCGGGGGCAGCGACGGACGGGCCGACCGGCGGCTGGCTCCTCTTCTCCCCACCTCAGCCCCAGCTCTGTCCTCTCTGGCGGTGCTTGGTTGGAGTGGAGGTTGTCCGAATAGCTTCTCGATCCCAACGGAGGAGCCGAGAAAGGAGAGCAGCTCTTCGTTCTGGAGGAATCGTCGTGGTGATCTGGATATGGCGAGGCGGCGCGCCGAGATATAGGGATGGGGGATCACACGGCTATGTGGCCACGGACGACGGGCGACAGCGACGAACCGTGGACGGCGGAGTAGTCGCGGGGCTGGGGAGTAGACAGCGGCGACACACAGATCCGAGGCGGCGACGGCCGCGTGTGAGGAAGTGGTGGGGTAGAGCGAGCGGCTCCGGCAGGTGCGCGCGCGGGGCGGTGGCGGTAGACGGCGGGCAGCGCGGTGGCATGGGGACGGCGGGCGGCGCGGCGGCGTGGGGAGGGCAGCGTGTGCGTGGCTGAGGTCAGGCGGGCGGCGCGGCGTGGGGATGGCGGAGGTTAGCGTTTTTTCAGCGTTCCTTTCTTTCGTGCGCGACGTGCGCGTTTTCTTTGGGCCGGGCCGCCGTGCAAAGCGTGGGTCCCACGCGACTGTGGATCCGATGGATTACAGGACCGGGGATGAACTCGTGCTTTTTATATTATACTAGCAAATATGCCCGTGCGTTGCAACGGGTGAAAAAACGTAATGATAATATACGTTTTTCATGCATAACCATATCGATAACAATCAGAAAATTAGAACTACGAAACTTTATTTTCTAGCGCGTTTTCTTTTGTGCTTTTTTCTGACATTTTTCCCTCACGTGTTTTTTTAAACCGTTTTTATTTTCTCGCGCATTTTTTCCTTTTTTAATATACTGTAGAAACTTCTCTTTTTATAGTTAGATTAGATTAGATTAGAGATAAAGAAGATATATAAATGGACTAAAAAACGACGAATATAAATTTGACTTTTTTCCTCCGCGCTTTTTTCCGTCCTTTTAATTTTTTTTCTCGTGCATTTCTTTTACGAAGGGTTTTTTTCACCACTTTCACATAGTGTCAAACCTTTCTAGATATAATAGGATTCGATTTTTTTTACCGCATCACGTATAATTCCTTTTTCTTTAGAAACAGACAATTTTTTCGCCCTTTTTTATCGCGTCAACGGAGTCGGAATCGTTTTGATTTTTTCCCTTTTTTTGGATCGGACAGATTTTTTTTTGCCCGGTTTATTTCGCCCGATCGATTTTTTTTACCGCGTCACATATAATTCCTTTTACTTTGGATTTTTTTCGCCCTTTTTTTACCGCGTCGACGGAGTCGGATTCGTTTTGATTTTTTTTCTCCCTTTACTTTGGAATTTTTTCGCCCTGTTTTCACCACGTCGACGGAGTCGGATTCATTTTGATTTTTCCCCTTTTTGGCTTTTTTTGGATAGGACAGATTTTTTTTTCTCCCCGTTTTTTTATCGGACTTTTATCTTTTTTTTCGCCTGGTTTTTTTATTTTTTTTACCGCGTCACATATAATTCCTTTTTCTTTATCGGAAAGTTTTTTTCGCCTTTTTTTACCGCGTCGATGGAGTCAGATTCTTTTCAGCTTTTTCCTTTTCTTTTATCGGACAAATTTTTTTTTCGCCCATTTTTTTTCTCCTGTTTTTTTCGGATCGGACTATTTTTTTCTTTTTTCGCCCGGTCGATTTTTTTACCACGATATATATAATTCCTTTTTCTTTGGAATAGGACAGTTTTCTTTTTATTTTTTTAAACTCTTTTTACCGCGTCGATGTAGTCGGATTCGTTTCGATTTTTTTCCTTTTTTTGCTTTCTTTTTTGTCGGACAGATTTGTTTTTTTTCCACCCGGTTTTTTTCCGCCCAGGTTTTTTTTATCGGACTTTTCTTTTTTTTTTTGCTCCACGATACATATAATTCATTTTTCTTTGGAATAGGACAGTTTTCTTTTTATTTTTTTAAACTCTTTTTACCGCGTCGATGTAGTCGGATTCGTTTCGGTATTTTTTCCTTTTTTTTCCTTTTTTTTTGTCGGACATATTTGTTTTTTTTCCGCCCGGTTTTTTTTCGCCAGGTTTTTTTATCGGACTTTTCTTTTTTTTTCGCTCGGTTTTTTTCTCCCGTTTTTTGACGGACGACGGAAGCACCTAGAGAAGTGTTAAGCACCTAGAGAAGTGTTTTTTTTCTTTTCTCCAATCCAATACAGATCGGATCTCTTCCAGGGAAATCCGATTTTTTTTCTCCAGGGAATCGGACTCTTTTTTTTTCGCTTTTTTTATTCATTAAACGGTTTGTCTCTCGGACTTTTTTTTCCCTTTTTAAGGGATCGGGTGTTTTTTTGCCAGGGACGGGTGTTTTTTTCGCCCGGTTTTTTTTTTCACTTTTTTTTTTTGGATCGGACTTTTTTTTTCGTCCGGTTTTTTTGATCGGACAAACTTGGTTTTTTCTGCCCGGTTTTTTTGACGGACGATGGAAGCACCTCTTATTTTTTAAGTAGTAGTAGATATTAGTATAGACATTCCTTATTTTTAATCCCGATTTTCTATTATTTATTAATTGTATTTCTATATGGACTCTGATTTTCTTTTTCTCCAATTAATATGAGAAATTATAGAATGTGAGAGCGAACATGGAGGCTCATTTTTCTATTACTTTAATAAAATAATAATAGATTCATTACGGCCTTTGCTTCTAAGAAATTATAACCAATTACTACGAATTATAAAATTACAGATTAATTAAAAATAACAAAACTACTTAGTATACCACCTTTAGACAGATATTTCCGTCTATGGTTGACCAATATATGCATAATCATTGTTTCTACTAATTGAGTCTCAAAATTTTACCATTTGACATGATCAAAATCATGTTTTCCTACTTGTTTAATGCGCCTAAACAGCACCATTGCTTGATTGATTCAGGTGGTTCACCAGGTTTTCACAAGATTCAAGGCACTGGGCCAGGTTTCATACCGGAAAATTTGGATAGATCTATCATCGATGAAGTTGTGACCGTAAGCTCGGAGGAATCCATAACAATGGCCAGAAGGCTTGCAAAGGAGGAGGGGCTGCTTGTTGGCATATCTTCTGGTGCAAATGTGTCTGCTTGCATCAAGGTAAAAACAGATGTTCTTTTTTTTTTGGAGGGAACGATAAAAAAAAACATATGTTCTTACCGAGTTGTAAACTTGCATTGCGTTTCGCGATATCTGACTTGTCAAAAAAATTACCAGATTGCAGCTAGAGAGGAGAACAAGGGTAAGATGATTGTTACAATGCTGCCGAGTGGGGGTGAAAGATACATGAACTCTGATCTCTTTGCAGATGTAAGGGAGGAATGTGCTAATATGACCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021023