BGIOSGA021033

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Revision as of 12:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021033| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021033, complete gene.| tag = P0456F0...")
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Gene Name

BGIOSGA021033

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021033, complete gene.

LocusTag

P0456F09.31

Ensembl Transcript ID

BGIOSGA021033-TA

Ensembl Protein ID

BGIOSGA021033-PA

Length

4418

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22287172..22291589

Sequence Coding Region

22290549..22291589,22290089..22290471,22289362..22289422,22289088..22289235,22288180..22288256
,22287790..22287842,22287172..22287256

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22287172..22291589 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22287172..22291589 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCACTAGCAGCAATCCATCCTATCACCAGCTGGGCCTCGACGCCATCAGCTGCTGCTTCGTCGCCGGCGGCGGCGGTGCAGAGGCGGCGGCGCCGTTCTTTGGTTTTGGGTTCGGGGATGTGGACGGCGAGTTCTTGGTCGCCTCGCCGGTGGCTGCTGTTGGCGACGAGCTGGCGTGCGCCGTGCCTCTGCGGCGGCCGCAGGGGAGCGTGTCGGAGGAGGAGGTGAATGCCGCCGCGGTCGCCGCCGCCGCGGCCGGTGGCGCGGAGAGCTGCAGCACCGTGCACTCGGTGCTGGGTTCGGTGGAGTTTGGGTGTGGAACGTCGTCGGGTGTCACCATTGCTCAGGCGTCGAGGATGGGAAGGCTCGCCGGAGAGGCGCCGTGCGGCGACGCCGGCGGCGGCGGCTGGATCTATGGAGGGTCCGGCATTGCGCCGTTACATGGTGCGTACTACCTGTCCGGGTTCTCCTCCGGCGCCGGCGCCGGGTTCTTGAGCCCTTTCGCCGCGAGCTCCGTGGCGGCGGCGGCGCCCGCGGCGAGCGAGCTGTCGCTGCGGCTCGGCGCCACCAAGTGTTCGTCCCCGAGCAGCATGGCGAACGCGTCGTCGGAAGTGAGCTGCTCCGGCTTAACCCACGTGAGCAGCGGAGGCGGCCTCGGCTACCACCAGGCAGCAGCCGCCGGCGCCGGCGCCGCCCTGTTCCACCCCACTCACGGCGACGACGCCGCAGCCGCCGCCGCCGGCGAGCTAAGGCAAGCGTACCACTCGAGGGCGCCTCCGCATTTCTCGCAGGTGGTGTCGCGGTCAGCGGTGCTCGCGCACGTCGCGCAGGAGCTGCTCAACGGCTTCGTCGCCTGCCTGCTGCAAGACGTCGCCGCGGACGCGGCCAGCGGCGTCGACGGCGGCGAGGCGAGCCAGGCGCTCTCGTCGGGCTTCTCGGCGAGGATCACGACGGCGCCGACGGAGGATGCCTCACCCGGGAGCGGCGGTGCGAGGTGGGCGGCGGAGGCGCAGCGTCTGAGGAAGCTACTCCAACTGGTGGACGAGAAGTGCAACCAATGCGTCGAGGAGATGCAGAGCACGGCGGCGAGGTTCAACAGCATGGTGCGCTCCACCGGCGGCGGCGGCGGCGGGCTGACGGCGGCGTTCGCGGGGCGGGCGGTGGCGGCGGCGTACAGGAGGGTGAGGAGGCGGGTGATGGGACAGCTGGTGGCGGCGGCGACGGCGAGGTCGTCGTCGTCGGCGGCGGCGGCGGCGCTGGAGGAGAAGGAGCGGAGCTGGGAGTCGTCGTTCATCCAGAAGCACTGGGCGATGCAGCAGCTCCGGCGAGGTGACCAGCAGTCGTGGCGGCCGCAGCGCGGCTTGCCGGAGAAGTCCGTCGCCGTGCTCAAGGCCTGGATGTTCGAGAACTTCCTCCGCCCGTATCCAAAGGACAGCGAGAAGGACATGCTGGCGGCGAGAAGCGGCCTGAGCAGGAGCCAGGTCTCAAACTGGTTCATAAACGCCCGCGTCCGACTGTGGAAGCCGATGATCGAGGACATGTACGAGGAGCTCAAGAAGACCTCCGGAGGAAGCGATGGCGCAGCAGAGATTGAGCATCTTAGCAGCAAAGATGTGCTCAGTTTAGAAAGGTCAAAAAAGCCATCACATTTGGCTGTTCAGTGTGATGGAAAACACCATGACAGATTCGCAGTCACTCAGATGGAGGGAGTGTTTGAAGAGAAGGGGATTGAGGAGATTGGGAAGATACGCAAAACGAGGAGTCATGCTTGTATGTGCATGGATGTGGACTCATCTGGGTATACAAGGAACAAAGGATGGATTGGGACACCTTTCATCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MSTSSNPSYHQLGLDAISCCFVAGGGGAEAAAPFFGFGFGDVDGEFLVASPVAAVGDELACAVPLRRPQGSVSEEEVNAAAVAAAAAGGAESCSTVHSVLGSVEFGCGTSSGVTIAQASRMGRLAGEAPCGDAGGGGWIYGGSGIAPLHGAYYLSGFSSGAGAGFLSPFAASSVAAAAPAASELSLRLGATKCSSPSSMANASSEVSCSGLTHVSSGGGLGYHQAAAAGAGAALFHPTHGDDAAAAAAGELRQAYHSRAPPHFSQVVSRSAVLAHVAQELLNGFVACLLQDVAADAASGVDGGEASQALSSGFSARITTAPTEDASPGSGGARWAAEAQRLRKLLQLVDEKCNQCVEEMQSTAARFNSMVRSTGGGGGGLTAAFAGRAVAAAYRRVRRRVMGQLVAAATARSSSSAAAAALEEKERSWESSFIQKHWAMQQLRRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWKPMIEDMYEELKKTSGGSDGAAEIEHLSSKDVLSLERSKKPSHLAVQCDGKHHDRFAVTQMEGVFEEKGIEEIGKIRKTRSHACMCMDVDSSGYTRNKGWIGTPFIS</aaseq>

Gene Sequence

<dnaseqindica>1..1041#1119..1501#2168..2228#2355..2502#3334..3410#3748..3800#4334..4418#ATGTCCACTAGCAGCAATCCATCCTATCACCAGCTGGGCCTCGACGCCATCAGCTGCTGCTTCGTCGCCGGCGGCGGCGGTGCAGAGGCGGCGGCGCCGTTCTTTGGTTTTGGGTTCGGGGATGTGGACGGCGAGTTCTTGGTCGCCTCGCCGGTGGCTGCTGTTGGCGACGAGCTGGCGTGCGCCGTGCCTCTGCGGCGGCCGCAGGGGAGCGTGTCGGAGGAGGAGGTGAATGCCGCCGCGGTCGCCGCCGCCGCGGCCGGTGGCGCGGAGAGCTGCAGCACCGTGCACTCGGTGCTGGGTTCGGTGGAGTTTGGGTGTGGAACGTCGTCGGGTGTCACCATTGCTCAGGCGTCGAGGATGGGAAGGCTCGCCGGAGAGGCGCCGTGCGGCGACGCCGGCGGCGGCGGCTGGATCTATGGAGGGTCCGGCATTGCGCCGTTACATGGTGCGTACTACCTGTCCGGGTTCTCCTCCGGCGCCGGCGCCGGGTTCTTGAGCCCTTTCGCCGCGAGCTCCGTGGCGGCGGCGGCGCCCGCGGCGAGCGAGCTGTCGCTGCGGCTCGGCGCCACCAAGTGTTCGTCCCCGAGCAGCATGGCGAACGCGTCGTCGGAAGTGAGCTGCTCCGGCTTAACCCACGTGAGCAGCGGAGGCGGCCTCGGCTACCACCAGGCAGCAGCCGCCGGCGCCGGCGCCGCCCTGTTCCACCCCACTCACGGCGACGACGCCGCAGCCGCCGCCGCCGGCGAGCTAAGGCAAGCGTACCACTCGAGGGCGCCTCCGCATTTCTCGCAGGTGGTGTCGCGGTCAGCGGTGCTCGCGCACGTCGCGCAGGAGCTGCTCAACGGCTTCGTCGCCTGCCTGCTGCAAGACGTCGCCGCGGACGCGGCCAGCGGCGTCGACGGCGGCGAGGCGAGCCAGGCGCTCTCGTCGGGCTTCTCGGCGAGGATCACGACGGCGCCGACGGAGGATGCCTCACCCGGGAGCGGCGGTGCGAGGTGGGCGGCGGAGGCGCAGCGTCTGAGGAAGCTACTCCAACTGGTGAGTTCTTGGCTCAGTTCCTCGTCGAACACCTAAGAAACCGTTTCTTGGTGCGAACCAATGGCGATGAGATGCAGGTGGACGAGAAGTGCAACCAATGCGTCGAGGAGATGCAGAGCACGGCGGCGAGGTTCAACAGCATGGTGCGCTCCACCGGCGGCGGCGGCGGCGGGCTGACGGCGGCGTTCGCGGGGCGGGCGGTGGCGGCGGCGTACAGGAGGGTGAGGAGGCGGGTGATGGGACAGCTGGTGGCGGCGGCGACGGCGAGGTCGTCGTCGTCGGCGGCGGCGGCGGCGCTGGAGGAGAAGGAGCGGAGCTGGGAGTCGTCGTTCATCCAGAAGCACTGGGCGATGCAGCAGCTCCGGCGAGGTGACCAGCAGTCGTGGCGGCCGCAGCGCGGCTTGCCGGAGAAGTCCGTCGCCGTGCTCAAGGCCTGGATGTTCGAGAACTTCCTCCGCCCGTAAGCTCAACCCGCATTCTTATAATCTCTTCTTCTTCTTGCTCTCAACTCTCACATGTCACAAATGATCACTCTGTGCTCATGATCATCACTCTTACTAGAGTTCTTTTTTTTTTTGAAAAAAAAAGTTTCAAATCAGAAACATGATACAATCACACAGAAAAAAAGGTATTAATGTGATAATGTCCATTCTTTGAAGTATAGAACAAATATAACTTGATTACTGGAGTAATTTCTATCCTTTAGACTTCAGAGTGGACATTAATACCTTTCTTTCTATCCTTTAGAATGGACATTAATAACATGATACAATCGCACAAACATATTGTAAGTAGGAGTAGTATGTTAACTTGAGTGCTGAAGATCTTATAGAGAAGTTTGCTTCGAACGGTATTGATTGGATAGATGTCATGGAACCAGTTCAAACTCTTGGAGTCAAGTTGTAATCATTTTTTTTTTTTGAAGTTTGACATCTCAAATATATTTTCCTATAGGTATGAAAATATGACTGTTTTAACAGTAGTTTCTACTGATGGTAGAAGTGGTCTAGACATTTCATCTTTTCTCATCCAATGGACCATATCTACTACTATTAATCATCCAATGGACCATATCATGATTCAAAGCAACACAAGTTCAATGAAAATATGTCAAATGCTGATTCAGGTATCCAAAGGACAGCGAGAAGGACATGCTGGCGGCGAGAAGCGGCCTGAGCAGGAGCCAGGTGAAGCCTCATTCAATCTTTCATCATCAAACATCCAAGCTACTACTACTTCACAAGATCAGAGAATTGTTTTCCTACTTATGGAAAAATAGGGGAAAAAATAGTATTAATGTTTTGCATTTTCAGGTCTCAAACTGGTTCATAAACGCCCGCGTCCGACTGTGGAAGCCGATGATCGAGGACATGTACGAGGAGCTCAAGAAGACCTCCGGAGGAAGCGATGGCGCAGCAGAGATTGAGCATCTTAGCAGCAAAGATGTGCTCAGTTTAGAAAGTTAGCAAGTTTCAGATGTACAAAATCTGAGCTCTGCTTTGTGAGCTTCTGCATTTGCAGCTAAGGGCCAACTAGTCACGAGTGTCCACTACTGATCAGGCCCTTATCTATGAAACCTTGAGGTTTTTCCTTGCATATATAAATTTATATAAGTTAATTTCTGGTGCCTCAAAATTGCAATGGATAGACAGTGTGTTGCCCTCTTCTGTCTCCTCATTTTTTGACAGATTGCAGATTTTGCTACAGTTCTTGTTTACCACGGGACCAAGACTGAATAGTTTCATGCAGATAGTTCCAGTCCAAAGGCAGGGATCTGCCTCATTTATTTTAAGAAAAAAGAAAACAGTCCATTTTGAGCTTATGATTGATCGACGAATATTCCATTGATCTGAGCATTTTTTTCAACGTGACTCTTCTACCCAACCCAATTATCCATGCATATAAAAGTGTACTACTCTCTTGTTCTATATTAAAGTCATATTGAGTTTGTCCTAAATCGAACAAAGTTTGATCATGTTTTTAGAAAAATGTAGTAGTGTTTCGAACACATAAAAAACATGCTGTAAAAACATATTTAGTGGTGGATTTAATGAAAACAATTTGATGCTATAGATATCACTATATTTTTTCTATAAACTTGGTTAAGGTTAAAGAAGTTTGACTTGTAACAAACCTAAAATATGGAGTGAACAGAGTTCACCCTAGGCATCTTTGGGTTGAACTCATGAAGTTGGCAAAATCCAGGTAGGGAGAATCTTGCAGTTACAATGTCTGCAAAATGTAGATAGATATCCAGTGCACATTTCTGAAGATTGAACCTGAACCAAGCAGGGTCAAAAAAGCCATCACATTTGGCTGTTCAGTGTGATGGAAAACACCATGACAGATTCGCAGTCACTCAGATGGAGGTAAAAAAACCGAAAAGAAAAAGGGAAAGGGTTTTGAAAGATTTTGAAGTGGCCACAAGTACAAGCATGCTTCTGTTGCTGATTGGATCCCTTTTTGCATTGCACTGTTCCTTGCCTGTTTGCAATCATGCCCCATCTCCCTGTATATGGTTCACGGATTTTGAAAAAGAGGAAAAAAACATCATCAGCACATGAATTGTTTGGCACCTGATTTGGCGTGTGCATCCAAGTTGGAGTCTTTGGAAAAATTATTTTTTTTGTTTATGATATAACTGGATTTTCCGTTCAGTTTTGCGTGATGAGACTAGTTGTACTGGATTCGATATACAACTCTTAGGGAGTGTTTGAAGAGAAGGGGATTGAGGAGATTGGGAAGATACGCAAAACGAGGTAAGCCATTAGCTCATGATTAATTGAGTATTAACTATTTTAAATTTCAAAAATGGATTAATATGATTTTTTAAAGCAACTTTCCTATTGAAATTTTTTGCAAAAAACGCACCGTTTAGTAGTTTGAAAAGCGTGCGCGCGGAAAACGAGAGACAATCTCTCCTATCTCCACCTAACGAACACTCCCTTAGTTTCTTTTTTTTTGGTATGCAGGGTTGTAATATTGTAGATATACAATAGATTTCGATAGTAAGATTTCATTTGATATAAAATTCTTAGCTCTTGTTACCATTTATAAAATTGTACGTTGCACACAACTATTATTGGACAATCTACGCTATTATAAAATGAACCCACCGTAATAAATTGGGATTTTATTCGTTTTCTTTGATTAATGTGAGAATTTTGACTCATTTTTTTAGCTATTTTGATAATATAATAGAAACTCTATCGAGCATTGGTACACATATGAAACTGCTAGGAATTAAAACACAAGTATGCTTTGAGCTGACCGATCATATCTGAAATGGCAGGAGTCATGCTTGTATGTGCATGGATGTGGACTCATCTGGGTATACAAGGAACAAAGGATGGATTGGGACACCTTTCATCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021033