BGIOSGA021058

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Revision as of 12:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021058| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021058, complete gene.| tag = OsI_233...")
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Gene Name

BGIOSGA021058

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021058, complete gene.

LocusTag

OsI_23333

Ensembl Transcript ID

BGIOSGA021058-TA

Ensembl Protein ID

BGIOSGA021058-PA

Length

6209

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21666815..21673023

Sequence Coding Region

21672829..21673023,21671594..21672088,21669810..21670010,21669528..21669723,21667795..21668304
,21666815..21667017

Genome Context

<gbrowseImage1> name=IndicaChromosome06:21666815..21673023 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:21666815..21673023 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCAACGATCGGCTCTACCCTCCGATCGACCCGTACGCCCTGGAGCCACCGCAGTTCGGCGACGACGCGGCTTGCGGAGGCGGTGGCGGTGGCGGTGGCGGCGAGGTTAGGGTTCGTGACCCGTCGGCGGTGATGTGGGACGAGGAGCCCGAGGTGTCCCCCTCCTCCCCGGAGGAGCCGGTGACTGAGGGAACCCACACATTTGAGCAAGGGCCAAAGGTTCATCTTACTGGAAATAACGTGGTAGGCAGTGCTGGTGTTGGTGATGTCTATGAATACAGCAGGGAAATGACCACCATGCAGGAGTTAGTAGAAAACACTTACTATGATTGTGCTCTTCGTGATCAAACTGGCATGTGGGTACCTCCATCGGTTCCACCGATGACAAAGCATGACCACGAGGAGTGGCAAAAGGGCTTTGGTGCTAATGGTGGGTACTTCGCTGAAGAAGATTTGTGGGATATAGATGAAGAAAACAAGGAGATGACAATGTGGGATGTGCTTGCTGCGATGGTTTCTGCGGGAAAAGATAAAGTATTGTCTGTTGTATCATATGATTTCGGGAGGCAAGGCATGTCTCTGATTTCACATTTGCTTCTTGAAGAGGCTTGTAAGGATAAGGCTGATACACTTGAAGATGCTAGTGTTGGTCTCGAACATGCACTCCTTGAGGCAGAACCAACAGTTGGAAGTTTGAAACCGGAGAAGTCAATCCCTGATTCGATTCTTAGACAAGCAAAAGGACTTGCTATAATTACTGTGGTAAATGTTGGAATGATGGTCACATACAAAATTGGTACTGGATTGGTTGTTGCTCGAAGGGCGGATGGTTCCTGGTCACCTCCTTCTGCCATCTCTACTTATGGTGTTGGATATGGAGTTCAGGCTGGAGGTGAGTTAGCCGACTACATCATTGTTCTGAGGAATACTGATGCCATCAGAACTTTCAGTGGAAATGCACACCTGTCAGTTGGGGCTGGCATTAGTGCTTCTGCTGGTCATCTTGGGCGAGTGGCAGAGGCTGATTTCCGTGCTGGTGATGGTGGTTATGCAGCCTGTTACACATACAGTTGCAGCAAAGCCCGAGTCCGGGTGGAAGAAGACCGTCACGTAGCCGGCGAGGACGATGGTGTTGAATGCCGACCGCGTGTACGAGTCCCTGTGCCGGCTGCACTAGAGGAGCCCGCACCGCTGGGAGCGTGCGCACTTGGCGATGATGATGCGATCGCAGTCGCGGACGCCGCCCCCGTGGCCCCGCCGCCGTGGCCCGTGGTGGTTGTCATCTTTGCCGCCCCGCCCGCCGCCGGCGAATGCGAACAACCACGGCCGGAGGTTCTTGACGCGCCGCCGGCGAAATGTGGAATGCAAATGCATCGGTTGCTCTTGCTGGACCTTCTCGACGCACCAGCGGCGATGGAGTTTCTGTCCTTGCATGGTGTACCGGCGGCGGCGGCCGCCCGGAGCATCACCGATCCATGCAAACCATCCATAGTGAAACCGTTCCACCGTCAAGCGTGCATCACCGGCGGAGACAAGCTGCTCGCGGCGCGGTTCGTCATCTTGCTGTTCGATCAATCAATCAACTCCAGCGGGGCATTTGTGGGCTGTGCACTCAATGGAAGTGTTGTATCAACTCGACATTCGGCGAATGCCCAATTTTATGGTGGTCCAATAAAGGCATCAGAAATCCTTCTTGGTTCAGTGAGCAGGCCAGCTGCTGCCGCTACCCTCTACAGAGCTCTGTCCAAATTGTTTGAGAAGGTCGAAAATTACTCCTCTCCTCTAGATTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAANDRLYPPIDPYALEPPQFGDDAACGGGGGGGGGEVRVRDPSAVMWDEEPEVSPSSPEEPVTEGTHTFEQGPKVHLTGNNVVGSAGVGDVYEYSREMTTMQELVENTYYDCALRDQTGMWVPPSVPPMTKHDHEEWQKGFGANGGYFAEEDLWDIDEENKEMTMWDVLAAMVSAGKDKVLSVVSYDFGRQGMSLISHLLLEEACKDKADTLEDASVGLEHALLEAEPTVGSLKPEKSIPDSILRQAKGLAIITVVNVGMMVTYKIGTGLVVARRADGSWSPPSAISTYGVGYGVQAGGELADYIIVLRNTDAIRTFSGNAHLSVGAGISASAGHLGRVAEADFRAGDGGYAACYTYSCSKARVRVEEDRHVAGEDDGVECRPRVRVPVPAALEEPAPLGACALGDDDAIAVADAAPVAPPPWPVVVVIFAAPPAAGECEQPRPEVLDAPPAKCGMQMHRLLLLDLLDAPAAMEFLSLHGVPAAAAARSITDPCKPSIVKPFHRQACITGGDKLLAARFVILLFDQSINSSGAFVGCALNGSVVSTRHSANAQFYGGPIKASEILLGSVSRPAAAATLYRALSKLFEKVENYSSPLDF</aaseq>

Gene Sequence

<dnaseqindica>1..195#936..1430#3014..3214#3301..3496#4720..5229#6007..6209#ATGGCGGCCAACGATCGGCTCTACCCTCCGATCGACCCGTACGCCCTGGAGCCACCGCAGTTCGGCGACGACGCGGCTTGCGGAGGCGGTGGCGGTGGCGGTGGCGGCGAGGTTAGGGTTCGTGACCCGTCGGCGGTGATGTGGGACGAGGAGCCCGAGGTGTCCCCCTCCTCCCCGGAGGAGCCGGTGACTGAGGTCCGTAGCACTTCGTTTTTCTCCTAATTTTGTGCGGTTTTCGGTCTTTGCTTGTACTAGATTGGAGTGGTTGCGTGTCAGGGTTCGTTTGTGGTGGATTGAGGGTGGGATTTGGAGGAGAGGGCGTGTTTGATTGATTGGTTGGGGATGCTTATTTGGGCGCTTCGGATTGAGGAGTGGAGAGCATGCGGTGAGGTGGTGCTAGCTTTATACTAGTAAGGAACAATTTGTTACATGCATAATGCTGCTGGTGTGGCTAGTTGCTGTTTCATGTGTGGTTGCAGGGTGTAGAGCAGCAAGCGTCAAAAAACTCTAATTGAGTAGTTGAAGTTTGCTAATGCTGTAAAGTAAAAAGGTCGTATTTGGATTGATACACGGATGTACCTTTTTCAGGCAAATTTTGGACTCTAGTTTATATGTGATAACTACTTTGGTCTGTCGATTTCTTTAGATGCATATGCTACACTATGAAGAAAGATAAAGAGATGTGTTTACTTTTTCTTTGTATCTAAGCATGATTTGCGTATGCTTGGGAATGCCTAACTAATAATCATTGCGTGGAAGCTCCTTGAAATAGCAGCACTGGGATATACTTCATCAATCTCTAATAGCAACACTTGGATATATTTCATCAATCTCTCTGTTTCTTTCCCGAAAAACTATTTTTATATTTTTTGTTAATTAATGTCGCTGTGGACTTAGCTGACTGCTTCTTGTTATAATTTATCATGACAAATCAGGGAACCCACACATTTGAGCAAGGGCCAAAGGTTCATCTTACTGGAAATAACGTGGTAGGCAGTGCTGGTGTTGGTGATGTCTATGAATACAGCAGGGAAATGACCACCATGCAGGAGTTAGTAGAAAACACTTACTATGATTGTGCTCTTCGTGATCAAACTGGCATGTGGGTACCTCCATCGGTTCCACCGATGACAAAGCATGACCACGAGGAGTGGCAAAAGGGCTTTGGTGCTAATGGTGGGTACTTCGCTGAAGAAGATTTGTGGGATATAGATGAAGAAAACAAGGAGATGACAATGTGGGATGTGCTTGCTGCGATGGTTTCTGCGGGAAAAGATAAAGTATTGTCTGTTGTATCATATGATTTCGGGAGGCAAGGCATGTCTCTGATTTCACATTTGCTTCTTGAAGAGGCTTGTAAGGATAAGGCTGATACACTTGAAGATGCTAGTGTTGGTCTCGAACATGCACTCCTTGAGGCAGAACCAACAGTCTGGCTGCCTGACAGTGCTGCTCCTTCTTGCATGCTTTGTGGAGCTCGTTTTCATGCCAATAATTTGCTCCCGCCATCATTGTCGTTTCTGTGGTGGACTATTCTGTGGTGGTTGCTCAAAGGGTAGAAGCTTGATGCCTCCAAAATTCAGCACTTCAGAACCTCAAAGGGTTTGTGATGTTTGTGGAGTACGTCTTGAGTGTATTCAGCCTTATTTGATGAATAAGATCAGCCGTGCTTGTCAGATTCCAACAAATGATTTGACAGACCTGAGCACCTTGAGGTCGTGGTTAAACTTACCATGGGCACGCACGATGGAATATGAGATATACAAGGCTGTAAATTCTATATATGGATATTTTAAGGTATGGCCATCCTATAATTCTAATACCTGTCCGTGTTATAACTTGGTTGCTTTGCATTCCTCTAATTTTTGTCTGGAACTCTGTATTCTCATGTATATCGCCCCAAAATGTATGTTGTTATGCTTGTTTGCTTTCTGACAAATATGTCTGCTTAACTAAAAATTGTTGACTGTCTATTTTTATCAAGTTCATGACTATCAAATTGGTACTAGGAACCAACTGAACATGCCTAAAATTCCAATTCTTCTGCGCAGCTGAACTTTACACAACACAACCGAAATCGCGTTTGCTATAACTCTAGCCAGCTTTAGTCCACCACATACTTCATATTCAAAACCATTGCAGCAAGGTTGATAATCCAAGTTCTTAATTTCCTATCAAACCTATACTCAGCCAAACCATTTTTCTTTCAAAGCCTTTTCATTAGTCATTATGTTCCTTTTACCATTCCAGGCCATGGTGAGAGCTTACATGATTGTTCTATTCTATCCACAATGTAAAAAATTCTGGTGTCATGCTAACAATTATTTTCACAAACCAGCATCACATGAAGTTTTAATTTGAACATTTATTAGTGTGAGCATTTATTCTGGATTTCAGATGATTTTGTAGGTTTAAATCCCAGCATATCCTTTGTAGTTCCTGAGGAAGAAAATAAGTGGTGTGGTCTGTATAGCATTTTCTAGAAGACCCTTTTGAAATTCAAATGAATCCATTCCTTTTGCCTTTGACAATGTTGAGATTGCACTATGGAAATTTCACCTTCTCTTTTCCAGCTACACTAAGGCTGGGTTCGTTTCCAAGTTTTCCCAACTCACCTCTCTCTTTTTCCGTGCGCACGCTTTTCAAACTGATAAACGGTGTGCTTTTTGCAAAAATTCTGTACGAAAGTTGCTTTAAAAAAATCATATTACTCCATTTTTCAAAAAAAAAAAAAAGATTAATACTTAATTAATCGTGCGCTAATGAGTTGCTCCGTTTTGCGTGCGCGAGGGATTAGTTCCCATCCCCAAGTGCCGAACACAGCCACTAAATGCTGCTATGAAGCATTGTTAGCTATTCAGTGTTGACCACTTCATATATTCAATTACAACCTGTTCTTAAATTTGTGAGACCATGATAAAGTTTTAAGACTTTTGTCCAGCTTGTTCGATCAGTCATTTTGGAATCAGTTAGAACACTAATCGCATTTTGTGTGCTTCAATGCAATTTTAAGGTTGGAAGTTTGAAACCGGAGAAGTCAATCCCTGATTCGATTCTTAGACAAGCAAAAGGACTTGCTATAATTACTGTGGTAAATGTTGGAATGATGGTCACATACAAAATTGGTACTGGATTGGTTGTTGCTCGAAGGGCGGATGGTTCCTGGTCACCTCCTTCTGCCATCTCTACTTATGGTGTTGGATATGGAGTTCAGGTCATTGCAACGGCTCAAGTGTTCTTGTTTCACCAAAGACATATGTTGAACATATTTATTTATTTATTTATTTATTGGCCTTGCAGGCTGGAGGTGAGTTAGCCGACTACATCATTGTTCTGAGGAATACTGATGCCATCAGAACTTTCAGTGGAAATGCACACCTGTCAGTTGGGGCTGGCATTAGTGCTTCTGCTGGTCATCTTGGGCGAGTGGCAGAGGCTGATTTCCGTGCTGGTGATGGTGGTTATGCAGCCTGTTACACATACAGTTGCAGCAAAGGTATGATTCAAACAACTAGCAGCTGAACAAAACTGAACTTCCTTTCCATTTTACCGTTGTCCGTGTTGGCCTACAGAAGTACTCTTCCTTTCTTCCTGATTTATTCACCAGCGCACAAACCTGCACATGATTAAGTTTCCTTGAATACCAGATAGTTCAGGGAGTAGATGCTTGGTTCTTTGAGTTTTTAATGAACTAAACTAATCTGGGAGTGCGACGCATTATTGATTGTGAGCTCCTTATTTCATATTTTACTTTCTTACATGTAGTTAAAAGAAAGGTAACTTATAATTGTTGATACCACTAGGCTGGTTGCTTCTGAGCAGCTCTTATCTTTTACCTGGTGCTTTTTAGCCAAACAGAGATGGGCAGCACTGCTTGGACTTGCTGTCAAGAACTAGTTTTTGCTACACACTATAAAGTCAAATACTGCACACATTTGAATTTTGTGATTATTGTTTAGTCCTTAATTTCTTCTTGCCACAGTCATTTTTGTTCAACATACCAACGTTGCTTAAAGACTTTTAAATATCTGTATGATGGTTTGTTGTTTAGAATAACATAATAAATAAAAGGAGTTCTGGAGAACTTTAACCACGTGGCCATTTCCAGTAGCCACTTACTAATTATAGCTTACAACAAACATTCAGACAACAAGAATCTGCATACTTGTAATTCCGTGCAGTTCAATGAAGTGAGATCATGATGGTTTGGAATTGTAGCTAGCCACTTCAAAGTACTACATTCAGATAATTTAATAAAGGGATAAGTCCATTTTACCCCCCTCAACTATAGCGTTTGTCTGAAATACACCCCTTAACTTCAAAACCGGGTATAATACACCCCTCAATTCTTAAAACCATTGAAATCACCCCCCCCCCCCTCCTGTCCTGAAATATGGTGGTTTCGCCAATGTGTGGCGCTGACGTGTCAATCTATGTCAGCAAAATATATTAGAAAATAATTAATGTCCCACATGTCAGACTGATTCTTCATCTTCCCTTCTCTCTCTCTTCCCAAGCCAGCAGCCACCGGGTTGGTCAGCTCGAGCGCTGATGCCGATGAACGCAGCAGACAGTGCAAAGAGGAGAGCCACGCCGCCTGGAGCTCCCCGACGCCGACCTTGAAGCCTCGTCGAGCTCCACCATGGAAGCAGATCGAGCGATGGCGAGCTCGCCATGCATGCGGTGTGGTTGCGCTACTGCCACTGGTGCTGGGTGTAGCCCGAGTCCGGGTGGAAGAAGACCGTCACGTAGCCGGCGAGGACGATGGTGTTGAATGCCGACCGCGTGTACGAGTCCCTGTGCCGGCTGCACTAGAGGAGCCCGCACCGCTGGGAGCGTGCGCACTTGGCGATGATGATGCGATCGCAGTCGCGGACGCCGCCCCCGTGGCCCCGCCGCCGTGGCCCGTGGTGGTTGTCATCTTTGCCGCCCCGCCCGCCGCCGGCGAATGCGAACAACCACGGCCGGAGGTTCTTGACGCGCCGCCGGCGAAATGTGGAATGCAAATGCATCGGTTGCTCTTGCTGGACCTTCTCGACGCACCAGCGGCGATGGAGTTTCTGTCCTTGCATGGTGTACCGGCGGCGGCGGCCGCCCGGAGCATCACCGATCCATGCAAACCATCCATAGTGAAACCGTTCCACCGTCAAGCGTGCATCACCGGCGGAGACAAGCTGCTCGCGGCGCGGTTCGTCATCTTGCTGTTCGATCAATCAATCAACTCCAGCGGTATGCGATTGCACAGCAAAACGCATCGAAAATTAAATGGGAGCATGCAATTTCGATCGATCAATTAAATGACGCGATCATCACTGGCGGCAACGAGCTGCTCGCTGGCTACGTGATTTGATCCGGAGATTCCCATTGATTAATTGCAGAAACTAGGATAGAAACCACTCGGGGGGGGGGGGGGTGTAAACTGCGTGGTATTGAAAGTTCGGGGATGTAAAATACCCGGTTTTAAACTTTAAGGGTGTATTTTAGACGAAGTGAAGAGTTGAGGGGGGGGGGGTCAAATGGACTTATCCCTTTAATAAATCAATACATCATACTCAGGTGCCTGGGGAGTAAATTATTAGATATAACATAAATTTAATTTGTTTATTTGAATATTTTTGTACGGAGAGAAGTGAGAGAAATGGCTTTGCAGCTTTCTGACTGTGTTGCTTAATAATCAAATCTGACTAAAAGAAATGTAATGGTTTTGAATCAAATTAATAGCATTAAATTCATGCGAATTCTTCTGCAAACAGTGATTGCTAGAACAGCTGAGGATCATCTTCAATGTTTCAGCATATATAAATAATATAATTCAGTTTTATTTTGAAAATGAAAACTGGAATGTTATGAAATGCATGCTGAAATTTTATATCCTGCTGGGAGCTTCCCCCGACGGTATTCTATGTCCTAGCTATAGATATGCACATGTATGCTCAACTCAATTTCTATCTGTAATCTCTGTTCCATTATTTCCCTTCACCATTTTCTATTCTTCTTCTCTGGCAGGGGCATTTGTGGGCTGTGCACTCAATGGAAGTGTTGTATCAACTCGACATTCGGCGAATGCCCAATTTTATGGTGGTCCAATAAAGGCATCAGAAATCCTTCTTGGTTCAGTGAGCAGGCCAGCTGCTGCCGCTACCCTCTACAGAGCTCTGTCCAAATTGTTTGAGAAGGTCGAAAATTACTCCTCTCCTCTAGATTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021058