Os11g0565300

From RiceWiki
Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0565300| Description = EGF domain containing protein| Version = NM_001074639.1 GI:115485926 GeneID:4350738| Length = 3981 bp| Definition =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0565300

Description

EGF domain containing protein

Version

NM_001074639.1 GI:115485926 GeneID:4350738

Length

3981 bp

Definition

Oryza sativa Japonica Group Os11g0565300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22888096..22892076

Sequence Coding Region

22888096..22888122,22888199..22888245,22888350..22888400,22889126..22889839,22889980..22890117
,22890227..22891153,22892055..22892076

Expression

GEO Profiles:Os11g0565300

Genome Context

<gbrowseImage1> name=NC_008404:22888096..22892076 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22888096..22892076 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttgcccactacttacaggaaagaagttattatcatcactgctagttgtggtgtcgaccaccctgaccttgaagcataccgctgccagcaccagcagcctagctttcgcggcgttgcccggctgcccagacaagtgcggcaatgtcagcatgccgtatccttttggcaccatagatggctgcttccggggaccacccttccgcgtctactgcgaagacgaccatgcggtttatctccaggagcacaagaagttgaaggtcttgcgattcgagctggcccagggcgaggttctcatccagaagcgcatagcaacaagctgcggcgtcaacctcaccggtaaagccgtcggcattccatgggtagtgcacgatggtggcttagcagatgactatccctatctgacaatctctaccaagaaccagtttgcagtagtcgggtgtggtatcacagcgatcatcgttggtcagggagagaaccagcctgattacacggtcggatgccgatcattctgtgatgatgtcgatagcaatattgtcgaagataatagcacgcaatgcaatggcaacacgggctgctgccaggcttccatcccaggtaatctcaaggctttccagccctcattcttaaaaataagcggtgtgaactactccggcgtcccgtgtgtctacgctttcgtcgtggagcagaactggttcaaattcaagacctcatatgccaaatcgatggaactttattcaaagtatcgaaataagggcaccggggttcctctagtgctcgacttggttgttggtaacgaaacgtgtgacgaagccaaaaggaacgcattatcctatgcgtgcaaggctacgaacagctcttgcatcgacagacctagccgctcagggtacctttgcaactgctctcaaggttatgaaggaaatccctacctacatggaggctgccaagacatcaatgagtgcgattatccatggttgtatccttgcaaaggtaactgtcgtaacaagattggaaactatgcgtgttcgtgcccatctggaactcagagcaaagatcccaagatcataccctgcactccaaccataggtttaagcattggtataggagttggtagcgcaacaggctttatttgcattgttctcattgcaatgttccttaccagacggataaagcacaggaggaaaataaagctaagacaaaagttcttcattctgaatcgtggacaactgcttaaacaattggtatcccaaagggcagatattgctgaaagaatgatcatcacattagatgagcttgaaaaggcaactaacaactttgacaaagctcgtgagcttggaggtggagggcatggcactgtttataaagggattctatcagacctacatgtggtagccatcaagatatcaaatatagtggtcccgaaagaaatagatgatttcataaatgaggttgccatcctctcacaaatcaaccataaaaatgtagtaaaactaattggctgttgtctagagactgaagttccattgttagtttatgaatttatttccaatggaaccctgtatcaccatcttcatggtgagggtccaaggtcgctatcatggagcaataggttgaggatcgcagccgaaattgcaaatgctctttcctatcttcactcatcagttacaatcccaataatccatagagatataaagtccagtaacatacttcttgatgataatctgacatcaaaggtatcggactttggagcttcaaggtatatcccaatcgagaaaacagcactaacaacagcagttcaaggtgttgtcttcctcctcggaggcatcgatatgtgggttgcacttctttcaggaagtcggagctgcctatatggtggggctagcttggcaacaaaaaaaacgccgaagctccgtttgtcaatgtag</cdnaseq>

Protein Sequence

<aaseq>MACPLLTGKKLLSSLLVVVSTTLTLKHTAASTSSLAFAALPGCP DKCGNVSMPYPFGTIDGCFRGPPFRVYCEDDHAVYLQEHKKLKVLRFELAQGEVLIQK RIATSCGVNLTGKAVGIPWVVHDGGLADDYPYLTISTKNQFAVVGCGITAIIVGQGEN QPDYTVGCRSFCDDVDSNIVEDNSTQCNGNTGCCQASIPGNLKAFQPSFLKISGVNYS GVPCVYAFVVEQNWFKFKTSYAKSMELYSKYRNKGTGVPLVLDLVVGNETCDEAKRNA LSYACKATNSSCIDRPSRSGYLCNCSQGYEGNPYLHGGCQDINECDYPWLYPCKGNCR NKIGNYACSCPSGTQSKDPKIIPCTPTIGLSIGIGVGSATGFICIVLIAMFLTRRIKH RRKIKLRQKFFILNRGQLLKQLVSQRADIAERMIITLDELEKATNNFDKARELGGGGH GTVYKGILSDLHVVAIKISNIVVPKEIDDFINEVAILSQINHKNVVKLIGCCLETEVP LLVYEFISNGTLYHHLHGEGPRSLSWSNRLRIAAEIANALSYLHSSVTIPIIHRDIKS SNILLDDNLTSKVSDFGASRYIPIEKTALTTAVQGVVFLLGGIDMWVALLSGSRSCLY GGASLATKKTPKLRLSM</aaseq>

Gene Sequence

<dnaseqindica>3955..3981#3832..3878#3677..3727#2238..2951#1960..2097#924..1850#1..22#atggcttgcccactacttacaggtatcgttttctttgtctattttcacttgtacaggcaacattttagagaacaaacacaaacgcacaaacatttactactaggtcatattaagaatgttgtcttgtccaattagcagtataccctcgccatatttatacccggcctagaaatattctgactaggagctgctcgagcctgcttctcatgcagtcctgcctctgaccctagtaccaaatctcaatttctatcctcatatagtttttttgcagattgatgcatgctttcaactcaatttacttgcaattagggagagaatatataagaagatgaccaacttaggacattcataggattttatggttgactaaaatttggatatctgatgtgggagtggatccacatttccaaatgaacttcttgcgatgaatatgttcagaactatagtgttgatgggtcgttaacatatagacacggtaatcgaaagatgaaactaccttttgtaattgcaattttatcttcttgttatgaaatttacttagtattaactttgtttttttatcaacatatttaatatatgattatgtaaatatcttttcctataggcttgaaaggagtaaacccaattttaaaatgtattttacttctatgtcatagtgtgattagttttatgtcttacttttagtcctgcctattgtgatctggggtagacaagcttggatatcggataaatcctgggtctgccacagtttgttatcctgaggtggcctaaaccattttagcaggcgtttacttttttttttcccttttggtcgattgtggaaaagaaagccaaaattctacgaaaatcatttttgtagtagtgatctttttctcagaaaatagtatgtaccactgcttcttgtgttaattacggccttgcaggaaagaagttattatcatcactgctagttgtggtgtcgaccaccctgaccttgaagcataccgctgccagcaccagcagcctagctttcgcggcgttgcccggctgcccagacaagtgcggcaatgtcagcatgccgtatccttttggcaccatagatggctgcttccggggaccacccttccgcgtctactgcgaagacgaccatgcggtttatctccaggagcacaagaagttgaaggtcttgcgattcgagctggcccagggcgaggttctcatccagaagcgcatagcaacaagctgcggcgtcaacctcaccggtaaagccgtcggcattccatgggtagtgcacgatggtggcttagcagatgactatccctatctgacaatctctaccaagaaccagtttgcagtagtcgggtgtggtatcacagcgatcatcgttggtcagggagagaaccagcctgattacacggtcggatgccgatcattctgtgatgatgtcgatagcaatattgtcgaagataatagcacgcaatgcaatggcaacacgggctgctgccaggcttccatcccaggtaatctcaaggctttccagccctcattcttaaaaataagcggtgtgaactactccggcgtcccgtgtgtctacgctttcgtcgtggagcagaactggttcaaattcaagacctcatatgccaaatcgatggaactttattcaaagtatcgaaataagggcaccggggttcctctagtgctcgacttggttgttggtaacgaaacgtgtgacgaagccaaaaggaacgcattatcctatgcgtgcaaggctacgaacagctcttgcatcgacagacctagccgctcagggtacctttgcaactgctctcaaggttatgaaggaaatccctacctacatggaggctgccaaggtgagaatgctctccaaaaatttccatgcccccttttcttgcaactagaaacatacaaattgacaccacttctttttaattccctggcccaacatcgtttgatggacagacatcaatgagtgcgattatccatggttgtatccttgcaaaggtaactgtcgtaacaagattggaaactatgcgtgttcgtgcccatctggaactcagagcaaagatcccaagatcataccctgcactccaaccataggtatatatataatattcactagcttttttgaaaaatatttttgcacaagtcatgtttggggaagtaacaaactattttcatgggaaacttttttttattaaaagtggtaaacaaatatctatatatatatatactttcaggtttaagcattggtataggagttggtagcgcaacaggctttatttgcattgttctcattgcaatgttccttaccagacggataaagcacaggaggaaaataaagctaagacaaaagttcttcattctgaatcgtggacaactgcttaaacaattggtatcccaaagggcagatattgctgaaagaatgatcatcacattagatgagcttgaaaaggcaactaacaactttgacaaagctcgtgagcttggaggtggagggcatggcactgtttataaagggattctatcagacctacatgtggtagccatcaagatatcaaatatagtggtcccgaaagaaatagatgatttcataaatgaggttgccatcctctcacaaatcaaccataaaaatgtagtaaaactaattggctgttgtctagagactgaagttccattgttagtttatgaatttatttccaatggaaccctgtatcaccatcttcatggtgagggtccaaggtcgctatcatggagcaataggttgaggatcgcagccgaaattgcaaatgctctttcctatcttcactcatcagttacaatcccaataatccatagagatataaagtccagtaacatacttcttgatgataatctgacatcaaaggtatcggactttggagcttcaaggtatatcccaatcgagaaaacagcactaacaacagcagttcaaggtactgtaggatatttggatcctatgtacttttacacgggtcgtctcaatgataaaagtgatgtctatagctttggtgttatgctagtggaattgctcacctagagaaaactatttccatatttgtcctctgaaggtgatggccttgttgcagattttgtcaacttacacagtgtaggtaatttggtccaaatgctagattctcaagttatagaagaagggggcactgaaatccaagaggtttcccaactagccatatcatgtatagaattaagaggtgaggatcgacctaccatgagacaagtgaactgttcactcgaaggcatcctctcacaaatcaaccaaaaatgaattatgtcatctgagaaggatgcggaggatagttcactggttggtggagaaatttgatcttcgagaataaggtttgatggttattaatcagttgtatgtaaactattgaagcgcaaagcacggggaaataagcatcgtacttgtaacatgatcaggttttgatgtttgtgttggccatagatatgcaatatatatttaatgttaatacctaaacatttaaaaaagttttatactcatttgaattgggtatatactcaatttcaaccatggtgcccaggcaccatggagcactaaacaattttgagtggtgccagttgattttgtggtgctgtgcatttatgttgtgactggcgattgcaactttgatgtccgtaggtgttgtcttcctcctcggaggcatcgatatgtgggttgcacttctttcaggtgaaaccctagttcggtgatccggatgggcgttggtagtatccttgatatttgtttcctccttggaggcttcgcatggaagtttgtgttccatggttgggcaggaagtcggagctgcctatatggtggggctagcttggcaacaaaaaaagtcagatgcccattcaaaatttttcatttttctcttctttcccttttcatttgcttttttgttcttcttcttttagacgccgaagctccgtttgtcaatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0565300, RefSeq:Os11g0565300