Os11g0565400

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0565400| Description = Similar to RING finger family protein| Version = NM_001074640.2 GI:297612039 GeneID:4350739| Length = 5192 bp| Defi...")
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Gene Name

Os11g0565400

Description

Similar to RING finger family protein

Version

NM_001074640.2 GI:297612039 GeneID:4350739

Length

5192 bp

Definition

Oryza sativa Japonica Group Os11g0565400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22893534..22898725

Sequence Coding Region

22893874..22894293,22894555..22894709,22895423..22895505,22895584..22895720,22896208..22896228

Expression

GEO Profiles:Os11g0565400

Genome Context

<gbrowseImage1> name=NC_008404:22893534..22898725 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22893534..22898725 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttgtgacgctgtgtgaggaagctgtggagatgctctcaaatatgaatcatccagctggggattgcccactttgtctatatcctttagtcaaagagaatgatggttctgctttgccatttatgaagttgatgtcgtgctaccactgcttccacagtgactgcattatgagatggtgggaatggctacagaatgatgatactgactcgaagaagagtagtacagcagcaactactgaagttattcatgcttctgaaggattggatttgtccagctcagctaagcatcacaatgtaagtcagcacaaaggactatgtccagtttgccgcaaagtgtttgatgagaaggatattgagcatgttcgtgatctgctaggtgcaaatacttctcaactggcatctttatcgattgatctggacgaagatgaaaaagaagtacttcattctgagtcagagaagatccgtcaagaaaagttcgcatcgctgttcaatctacaacaagaacgaaatggcctgattgaaccaaagaaagacctttccatacagcctggaatgtacatccctcgtcctcccagcgcgcctactgcttccgaaggagacaccgttgatgattcttgtgaagacaccacaacttcaacctcaggaacggagccactcaaccagacaaacagcactggtggtaccaccaagcacaacagcagttcaggtcatcgaaggagacatcgatctcatgcttcaagaagacaaccacatgggcaagggcaacctgctaggcaacaatggcagaggaaaggcggagacacttcacaccaatag</cdnaseq>

Protein Sequence

<aaseq>MLVTLCEEAVEMLSNMNHPAGDCPLCLYPLVKENDGSALPFMKL MSCYHCFHSDCIMRWWEWLQNDDTDSKKSSTAATTEVIHASEGLDLSSSAKHHNVSQH KGLCPVCRKVFDEKDIEHVRDLLGANTSQLASLSIDLDEDEKEVLHSESEKIRQEKFA SLFNLQQERNGLIEPKKDLSIQPGMYIPRPPSAPTASEGDTVDDSCEDTTTSTSGTEP LNQTNSTGGTTKHNSSSGHRRRHRSHASRRQPHGQGQPARQQWQRKGGDTSHQ</aaseq>

Gene Sequence

<dnaseqindica>4433..4852#4017..4171#3221..3303#3006..3142#2498..2518#gaaaaaaaaaagaaaaaggaaaaagaaaaaaggaaaatcttcaccgaaggcaatggcggcggcggcggaggcggaggaggaggtgcggcaggaggtggaggcggtggcgtcggtgtacggcgacgactgccgcgtggtgcgcggcttccctccccacctcgtcgtccacgtccgcccccgcaccgccgacgactcctcgcagcaggttagtgctcgccgtcctagctccacgggcgagccgcttcgcagcatccggatccctcccgatttcggtgttccgttcgtggattcggtcgatcggtcggtcggagacggtggcggcggtgctctgctgcctcctaaccctagctcccagataggaggaggaaggaggggattagtgtggttacctgagcctttgtgtttcgtggttgatgtagtttattactccctccatccacaaaagttagatatatttcacatttaactttttccaaataagttgttcctatttgtagtctttatgcatctaagacttaaataaagagataaattaaatgtttgatgagagcccaaggagtcatctaaatactcattggttgcatgcttgcattcactccttgattttgtaacatccaagatgatttaatttcttcttggtcttggtgacaaaagtaatatgtgcaacttttgtggatggagggagtagtatggctagtaccaattgcgttactgattgattatcccatgatgaaggcatcaattctgggccttgaaggaatcaattgtggggggcttttccttggagcccatcggggcggagcggcgcttcagttcagtagtagaggagtcaatttggtaacataccttttcatttatgagtacaggtatttttttggggatggagaccactgttaaggtgatcagtgaaggggatattagataaggaggcagaatgggagagataagggtaagtgggatattaaagatgtgagaggaggatgggtacttcggggaggcagtgggcattgtgtggtggtgaagggaataagaaggtgggaatgtggtgtaaggaatggcaacttcaaaggacggtacataaattggtggtaaccaagactgtttcttttctgttccatccgatcaagagtgaggcattccacattgcctcccaacatataggtatcccttggtctgtccataataaaatggtagctagtaactgccgacatgaccatgagcaagattgagcatgttagttaaaaggtccttgggtggtatgctctctcagtgacccttgaggtggttgtaattgtcgcatttcctgagtgtgtttcatgtgaccagaagtgtggaaaagaagatataattgtcctttattatcaacttttccatgttttacgtatgattacattattcaagggatccatgtatttttgtaagccaatattgctcttaatttcagttgcttatgttgaaggagttttatcatcatgcatttagatttgctaatgaccattttcacttttgcagttcgtggagctatttcttggaattaaagcatcttctcaggtatgaattacaaacttctacctcctttctagattcagttctatgcatttatttttcatggtgacttgttgttggaaacaatttgtttaactgatcggcttgaaatatctttttacctggttcttacatatggttatttgttttgtttgtgtcttttagaactcctgtcggtttttatctcactgttgatcatgagttcctatattgttattcattatgaacatggaaatacttttacatatacctgaccatcatgttaaagaacatgacaggttaatcataagacataactgtctttgtagtttgtacacttaggctcactctttattcatttacacaactgcagttcttcatggtacatgcctataacttgtattgaaaacttactttgttttgggatgatgtaaattatagctctttgttgggctggctctcaattgtaatgtcttcgaagcagtaatgcagtttcactgcattgaggcaactctctaatatctgtgatatcataaattcggaacaacacaaatttattgtggaggacaagaggcacctctttttgcagcaacccagcagacaacttgtgaatcattttttttttaattcatggccagcctaaatttcacaaccaactctatgctgtaacttacaaacctttccaatttcaatatttgtattaggactggtgctggtttgtaactttactatccttcaccattctgtatgcttctgtcattcacctttgcttacacaccttgattagagcactttatagctggttatgttctagctcagtgttaatgcattagattttttattcttcgaattgcagtatccaaaagcacctcctcatgtttatgccgtggaaagtaagggccttgatgagaatcgacaggtgtatcttattagcagcatccagaacaaggcaagagaactttcctgctacccgatgcttgtgacgctgtgtgaggtactattccattcattgtcttcttatagagtacagagcaaaacttgcttcgtctagtaatgtcttgaggattatgcatacttactacatgtaaattgaaactatctgtgaattgcatagtctatggcagtttttagaagcggtactcaatttacattattgtctaattggcattcatttgggagtgaagggaaattggatagtgccaacaattgacactgactgctgctattcgaactataacagtgtctttgggaagtattagatggtttttttctctgtttgagaaattcttatagatgactccagaaattcaaaattttgtaagacactactatggatttattgcataccacgatcagatccactttatctgtaggtgttatggaattctgtaacaaaaaaaatgctcatatgcattgtagcagtttgctgtctaagagggtggattttgatttacatgaaacctatctgacttctcatgcaggaagctgtggagatgctctcaaatatgaatcatccagctggggattgcccactttgtctatatcctttagtcaaagagaatgatggttctgctttgccatttatgaagttgatgtcgtgctaccactgcttccacaggttgacttctgccacatactgatatgtgcaattgcaagaaatactctgtagtagtgtcttattattttggaatttcagtgactgcattatgagatggtgggaatggctacagaatgatgatactgactcgaagaagagtagtacagcagcaactactgaaggtgctagaaatatttcattttgcctttttttttttcacttctgtaaaatgtgttttttaatccttttcaactgcctacaattatttcatgcacttttgggtcaaagatgcttacaaatacaaacataatttaggttgattgacagttatttatgttaaagatgcttgtatgctgtccctttttaatttccccaaggttccagtctgtgcgaaggaaacaaggatagtcacattctggtagaatcatgtataaacttgctgtcgtaatgaagctagtaaaatagcagcttacctgtttaaaacttctggtgtcaatttactttcttaatagcctcatgttggcaacatgattaccattgtttcacatagatattgccttatgttctttgatgactttcacatctaaatttccatcctaacaaatgaaagcgtctgaagtccttatcgaccagcctctgcccttaagagtaatgagcttcaatcttgtattttgtttttgaaccttaagagtatgaatttaagcttttgtgtgcatcagtgcttgacattatgctgattttattttttttcattaaacatatattttaaaggatgcaagtgcagtttatatcatcagtataccaattatcgacaatgtaaatatgatcgtttatgtagttaacatttttgttggttggtgtgttaatcagtgttaatcttgactactgctactagttattcatgcttctgaaggattggatttgtccagctcagctaagcatcacaatgtaagtcagcacaaaggactatgtccagtttgccgcaaagtgtttgatgagaaggatattgagcatgttcgtgatctgctaggtgcaaatacttctcaactggtatgtatcagtacaagttaacagctttcaactttttcatgcactgtcagttttgatatgcctgtaccgtattcattggttcacaattatcttctatcatcactggtgttcggttttcctcacaaacttttatagagttatttaaagtacaattacatcctcgtacgtttttcagttcacattatatatttcaagtaaagcctgtcagagatattgtactctgaaaacagctataattgatatttacccttccacctataggcatctttatcgattgatctggacgaagatgaaaaagaagtacttcattctgagtcagagaagatccgtcaagaaaagttcgcatcgctgttcaatctacaacaagaacgaaatggcctgattgaaccaaagaaagacctttccatacagcctggaatgtacatccctcgtcctcccagcgcgcctactgcttccgaaggagacaccgttgatgattcttgtgaagacaccacaacttcaacctcaggaacggagccactcaaccagacaaacagcactggtggtaccaccaagcacaacagcagttcaggtcatcgaaggagacatcgatctcatgcttcaagaagacaaccacatgggcaagggcaacctgctaggcaacaatggcagaggaaaggcggagacacttcacaccaatagcaggaaaggttgtgggaggtttgttttttgtcggttataatcgcaagcctggtaccaattctatgtttcatgcctcactatcagacggctcataacatggcagaattatccaatgctgttgttatgactaagagtatattatagttttaaactcggttcatgtcactgctgcgaaactgaagctactagccactgtatacacatcaatttgactttgcatatcactgttgtgactcgtgagagatctggctagcacgtacttatgttcagccaaattcttcaaactggatgcaattgaagcacctggtgtttataagaaactttttgtgctattagcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0565400, RefSeq:Os11g0565400