BGIOSGA021115

From RiceWiki
Revision as of 12:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021115| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021115, complete gene.| tag = OS06G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021115

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021115, complete gene.

LocusTag

OS06G0530700

Ensembl Transcript ID

BGIOSGA021115-TA

Ensembl Protein ID

BGIOSGA021115-PA

Length

1728

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20544390..20546117

Sequence Coding Region

20545757..20546117,20545585..20545616,20544390..20545274

Genome Context

<gbrowseImage1> name=IndicaChromosome06:20544390..20546117 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:20544390..20546117 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGGTTTATTTGAATTGGGCCCATTCCGGCCCATCGAAGCGAAACGAGGCTCTTACCTGCACGAAGAACCCAAAGCCCAGCCCACCTCAGCATTCATCCCGCTTCCTCTGCTCTCTCTGGAACTCACCGCCCTCACTTCCACCGCCGCCGCCGCCGTGTACCCCCTCCCCCGCCGCTTGACGCGCCTCCTCTTCGTCGACCCAATCCCTCCGTCGGGTACGCCGCCGCTGCCCCCCTACACCCTTGCCCCTCCTTTCCTATTTACACAGGCGGATCGATGCCGTGGGAGAGCCGGCTGCCCGCGGAGGTGCGTGGAGGCGGCGGCCTGCGGCGCGGGCGGGGAGGCATTAAGGCGAGCTAGGGCTCTGACACTGACCGTGGTCCGTGAGCATATGGATTTGCCAGGTCCAAGATGGAAGAAGGGCAAAGATGGCAAGGACTTTGCGTCCCTAGCAGCAGCTAACCCCATGTCAGCCATTGTTTCTGAGCTCAAGGCCTCATTCATAAGCTCAAAGCCCGTGGCAATTTTGTCTGGTCCGGGTGGTAGCGCCGTTCTTGGAGTTGGGCCAGAGCAAGCCGTGATCCTAAACCGTGCTGCCTTTGGCCATGCCATCGAAAATGCAACAGCACAGAAGCATTGGTTCCAACTCAGCCCCGAGGAGGTCTTTTACCTATGCCATGCTCTGAATTGCATCAGGGTTGACTCACTGGACAATAAGCAAATGAGTGAAATTGAACTGTGGGATTACTTTAGGTCTGGATCGGAGTCATTTCCGGAGATGTACAAGGCTTACGCACATCTGAGATTGAAGAACTGGGTGGTGAGATCAGGGCTGCAGTATGGTGCGGATTTTGTAGCTTACCGTCACCATCCAGCGCTCGTCCACTCGGAATTTGCAGTGGTTGTAGTTCCAGAAGGTGCAGAGTTTGGCAATAGGTGTGGCCGTCTGGAGGTGTGGTCTGATCTACTATGTGCACTCCGGGCTTCTGGCAGTGTAGCAAAGACATTACTGGTTCTGACAATTAGCAGCAGCAGTAAATGTGAACTGAGCTCCCCAGATTGTTTGGAACAGCTTGTTGTTCACGAGAGAACGATCACAAGATGGATACCGCAGCAATGCCGTGAACAACGATGTGAACCAAGCAGAGATGAAGTGAATAGGGAAGAACTGATTATTGAAAAGGAAAGTGTAGTATTTAATCACTGGGGTGTGATACTAGGCTTCACTGTTCTATCTGGCTTGCTTGTGTACAGGTTGAAATTCAGACAATAG</cdnaseq>

Protein Sequence

<aaseq>MTGLFELGPFRPIEAKRGSYLHEEPKAQPTSAFIPLPLLSLELTALTSTAAAAVYPLPRRLTRLLFVDPIPPSGTPPLPPYTLAPPFLFTQADRCRGRAGCPRRCVEAAACGAGGEALRRARALTLTVVREHMDLPGPRWKKGKDGKDFASLAAANPMSAIVSELKASFISSKPVAILSGPGGSAVLGVGPEQAVILNRAAFGHAIENATAQKHWFQLSPEEVFYLCHALNCIRVDSLDNKQMSEIELWDYFRSGSESFPEMYKAYAHLRLKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVVPEGAEFGNRCGRLEVWSDLLCALRASGSVAKTLLVLTISSSSKCELSSPDCLEQLVVHERTITRWIPQQCREQRCEPSRDEVNREELIIEKESVVFNHWGVILGFTVLSGLLVYRLKFRQ</aaseq>

Gene Sequence

<dnaseqindica>1..361#502..533#844..1728#ATGACGGGTTTATTTGAATTGGGCCCATTCCGGCCCATCGAAGCGAAACGAGGCTCTTACCTGCACGAAGAACCCAAAGCCCAGCCCACCTCAGCATTCATCCCGCTTCCTCTGCTCTCTCTGGAACTCACCGCCCTCACTTCCACCGCCGCCGCCGCCGTGTACCCCCTCCCCCGCCGCTTGACGCGCCTCCTCTTCGTCGACCCAATCCCTCCGTCGGGTACGCCGCCGCTGCCCCCCTACACCCTTGCCCCTCCTTTCCTATTTACACAGGCGGATCGATGCCGTGGGAGAGCCGGCTGCCCGCGGAGGTGCGTGGAGGCGGCGGCCTGCGGCGCGGGCGGGGAGGCATTAAGGCGAGGTGCGCCGGGGGGGGGGGGGGGGGTCGAGTACTGCAAGCGAGCTGCGAGCAGAGGAGCTCTGATTTAGTGATCTTTTTTTTCTTTTTTCCGTTTCTGATTTAGTGATCTCTGAAGATGGATTCTCCTCGTTGGTTTGCAGCTAGGGCTCTGACACTGACCGTGGTCCGTGAGGTAGGGACGTAGGGTATGGTATTGTGAAATTTTTAGGCCGATTCGACAAATTCTATTTTCATGTGATTTGATTATCAATGATTATGTTAAAGTGATTTGTTAATTTCCGATTTAGTTCTGTTAACGCGCATTGATGCATATTATGTTCCAAAGATTATTGATATATCTATGTTCTACAAATAATATGTTCTATAAATTGGTGATCTATGTTATTAACATTCATTTGTTTGGACAACGATGTTCATTTTACTTGTTTTTACTATTCACTCCAGCACTTGGCCACTAGTCCCTGCTCTGCCACTGGGTTCAGCATATGGATTTGCCAGGTCCAAGATGGAAGAAGGGCAAAGATGGCAAGGACTTTGCGTCCCTAGCAGCAGCTAACCCCATGTCAGCCATTGTTTCTGAGCTCAAGGCCTCATTCATAAGCTCAAAGCCCGTGGCAATTTTGTCTGGTCCGGGTGGTAGCGCCGTTCTTGGAGTTGGGCCAGAGCAAGCCGTGATCCTAAACCGTGCTGCCTTTGGCCATGCCATCGAAAATGCAACAGCACAGAAGCATTGGTTCCAACTCAGCCCCGAGGAGGTCTTTTACCTATGCCATGCTCTGAATTGCATCAGGGTTGACTCACTGGACAATAAGCAAATGAGTGAAATTGAACTGTGGGATTACTTTAGGTCTGGATCGGAGTCATTTCCGGAGATGTACAAGGCTTACGCACATCTGAGATTGAAGAACTGGGTGGTGAGATCAGGGCTGCAGTATGGTGCGGATTTTGTAGCTTACCGTCACCATCCAGCGCTCGTCCACTCGGAATTTGCAGTGGTTGTAGTTCCAGAAGGTGCAGAGTTTGGCAATAGGTGTGGCCGTCTGGAGGTGTGGTCTGATCTACTATGTGCACTCCGGGCTTCTGGCAGTGTAGCAAAGACATTACTGGTTCTGACAATTAGCAGCAGCAGTAAATGTGAACTGAGCTCCCCAGATTGTTTGGAACAGCTTGTTGTTCACGAGAGAACGATCACAAGATGGATACCGCAGCAATGCCGTGAACAACGATGTGAACCAAGCAGAGATGAAGTGAATAGGGAAGAACTGATTATTGAAAAGGAAAGTGTAGTATTTAATCACTGGGGTGTGATACTAGGCTTCACTGTTCTATCTGGCTTGCTTGTGTACAGGTTGAAATTCAGACAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021115