Os11g0568200

From RiceWiki
Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0568200| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001074644.1 GI:115485936 GeneID:4350743| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0568200

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001074644.1 GI:115485936 GeneID:4350743

Length

1938 bp

Definition

Oryza sativa Japonica Group Os11g0568200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23018258..23020195

Sequence Coding Region

23018258..23020195

Expression

GEO Profiles:Os11g0568200

Genome Context

<gbrowseImage1> name=NC_008404:23018258..23020195 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23018258..23020195 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcctacacagaagttccttctcttcctcctcgttggagtagccgccaccttgtcccttgcaaccaattcaccggtgccgcagtggccagccagctgcacgccacgggagagggaggccttgctggccttcaagcgaggcatcaccggtgatcccgcaggtcgtctcacctcgtggaagcgaggtagccatgactgctgccagtggaggggcgtccggtgcagcaacctcaccggccatgtccttgagctccaccttcggaataacttcccgcgatacgacgaagcaacagctttggtggggcacataagtacttctctgatctctctcgagcacctagagcaccttgacctcagcaataacaatctcgtgggtccagccggccgattcccgcggttcgtcagctctctcaggaacctgatatatattaacttctctggtatgccattaacaggtatggtgccgcctcaactcggtaatattacaaagctgcaatatctcgacctttcccatggaataggtatgtactcaacagatatacagtggctcaccaatctaccagccctaaggtacctaggcttatcaaatgtaaacctcagcagagtatctgactggcctcgtgtggtgaacatgaattcatatctaatagtactcgatctttctggttgctctcttacaagtgcaagccaatcattctcacagttaaacctcacaagactcgagaagctcgacctctcctacaataattttaaccaacctttggcatcttgttggttttggaatttgacaagtctcacgtaccttgatcttataatgaacattttgcccggtcagtttccagattcactaggagacatgaaggccctccaggtcttcagattctcgagtaatggtcacagtatcataatgccaaacttgctacaaaacctatgcaatttagaaatcttagaccttggaggcctaagttcctgcaacataacagagcttctcgatagtttgatgcattgcttaaccaaaagaatacggaaactatatttgtgggacaacaatatcactggaactctgccaactggggtgggcaaatttactagtttggacactcttgatctctctcataaccaactgactggatctgttccatatgagattagcatgctgactagtttggctaagatcgacctaagcctcaataacctgacaggtgaaatcacagaggaacacttagctggcttaaagagtttaaaaagcttaaacttgtattataatccctacttgaagattgtgcttggtgatgaatggttaccgccctttagactagaggtggcgagatttggatcttgtcagctaggtccaatgtttccttcgtggcttcaatggatggtgaatattaaagaacttgatatttggagcacaggtataaccgatcaacttccacattggttttggacaacattttctaaggcaacagacttagtcatatcctccaacaatatcagtggtagcttgccagcaaatatggaaaccatgtcactagaaagactctatttaggttcaaatcaaataaccggtgtaataccaatcctgccacctaacctcacctggttggagatccaaaataacatgctatcagggtctgtggcatcaaaaacctttggatcagctccacaactaggttttatggatctatcctccaacaacatcaaaggtcatattccaggttctatctgcgagttgcagcacttgcaatacttgaatttagccaacaatcatttggagggagaatttcctcaatgcattgggatgacagaactacagcattttatcctaaataacaatagcttatccggcaaggtcccgtcttttctgaaaggttgcaagcagctaaagtacctggatctatcacagaataagttccatggaagattgccaagttga</cdnaseq>

Protein Sequence

<aaseq>MDPTQKFLLFLLVGVAATLSLATNSPVPQWPASCTPREREALLA FKRGITGDPAGRLTSWKRGSHDCCQWRGVRCSNLTGHVLELHLRNNFPRYDEATALVG HISTSLISLEHLEHLDLSNNNLVGPAGRFPRFVSSLRNLIYINFSGMPLTGMVPPQLG NITKLQYLDLSHGIGMYSTDIQWLTNLPALRYLGLSNVNLSRVSDWPRVVNMNSYLIV LDLSGCSLTSASQSFSQLNLTRLEKLDLSYNNFNQPLASCWFWNLTSLTYLDLIMNIL PGQFPDSLGDMKALQVFRFSSNGHSIIMPNLLQNLCNLEILDLGGLSSCNITELLDSL MHCLTKRIRKLYLWDNNITGTLPTGVGKFTSLDTLDLSHNQLTGSVPYEISMLTSLAK IDLSLNNLTGEITEEHLAGLKSLKSLNLYYNPYLKIVLGDEWLPPFRLEVARFGSCQL GPMFPSWLQWMVNIKELDIWSTGITDQLPHWFWTTFSKATDLVISSNNISGSLPANME TMSLERLYLGSNQITGVIPILPPNLTWLEIQNNMLSGSVASKTFGSAPQLGFMDLSSN NIKGHIPGSICELQHLQYLNLANNHLEGEFPQCIGMTELQHFILNNNSLSGKVPSFLK GCKQLKYLDLSQNKFHGRLPS</aaseq>

Gene Sequence

<dnaseqindica>1..1938#atggatcctacacagaagttccttctcttcctcctcgttggagtagccgccaccttgtcccttgcaaccaattcaccggtgccgcagtggccagccagctgcacgccacgggagagggaggccttgctggccttcaagcgaggcatcaccggtgatcccgcaggtcgtctcacctcgtggaagcgaggtagccatgactgctgccagtggaggggcgtccggtgcagcaacctcaccggccatgtccttgagctccaccttcggaataacttcccgcgatacgacgaagcaacagctttggtggggcacataagtacttctctgatctctctcgagcacctagagcaccttgacctcagcaataacaatctcgtgggtccagccggccgattcccgcggttcgtcagctctctcaggaacctgatatatattaacttctctggtatgccattaacaggtatggtgccgcctcaactcggtaatattacaaagctgcaatatctcgacctttcccatggaataggtatgtactcaacagatatacagtggctcaccaatctaccagccctaaggtacctaggcttatcaaatgtaaacctcagcagagtatctgactggcctcgtgtggtgaacatgaattcatatctaatagtactcgatctttctggttgctctcttacaagtgcaagccaatcattctcacagttaaacctcacaagactcgagaagctcgacctctcctacaataattttaaccaacctttggcatcttgttggttttggaatttgacaagtctcacgtaccttgatcttataatgaacattttgcccggtcagtttccagattcactaggagacatgaaggccctccaggtcttcagattctcgagtaatggtcacagtatcataatgccaaacttgctacaaaacctatgcaatttagaaatcttagaccttggaggcctaagttcctgcaacataacagagcttctcgatagtttgatgcattgcttaaccaaaagaatacggaaactatatttgtgggacaacaatatcactggaactctgccaactggggtgggcaaatttactagtttggacactcttgatctctctcataaccaactgactggatctgttccatatgagattagcatgctgactagtttggctaagatcgacctaagcctcaataacctgacaggtgaaatcacagaggaacacttagctggcttaaagagtttaaaaagcttaaacttgtattataatccctacttgaagattgtgcttggtgatgaatggttaccgccctttagactagaggtggcgagatttggatcttgtcagctaggtccaatgtttccttcgtggcttcaatggatggtgaatattaaagaacttgatatttggagcacaggtataaccgatcaacttccacattggttttggacaacattttctaaggcaacagacttagtcatatcctccaacaatatcagtggtagcttgccagcaaatatggaaaccatgtcactagaaagactctatttaggttcaaatcaaataaccggtgtaataccaatcctgccacctaacctcacctggttggagatccaaaataacatgctatcagggtctgtggcatcaaaaacctttggatcagctccacaactaggttttatggatctatcctccaacaacatcaaaggtcatattccaggttctatctgcgagttgcagcacttgcaatacttgaatttagccaacaatcatttggagggagaatttcctcaatgcattgggatgacagaactacagcattttatcctaaataacaatagcttatccggcaaggtcccgtcttttctgaaaggttgcaagcagctaaagtacctggatctatcacagaataagttccatggaagattgccaagttga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0568200, RefSeq:Os11g0568200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os11g0568200&oldid=4367"