Os09g0344800

From RiceWiki
Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0344800| Description = Protein of unknown function DUF81 family protein| Version = NM_001069468.1 GI:115478678 GeneID:4346797| Length = 485...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0344800

Description

Protein of unknown function DUF81 family protein

Version

NM_001069468.1 GI:115478678 GeneID:4346797

Length

4853 bp

Definition

Oryza sativa Japonica Group Os09g0344800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11328963..11333815

Sequence Coding Region

11329332..11329565,11329930..11330089,11330839..11331039,11331126..11331190,11331302..11331329
,11331409..11331485,11331585..11331671,11332134..11332184,11332687..11332908
,11332986..11333079,11333170..11333310,11333396..11333481

Expression

GEO Profiles:Os09g0344800

Genome Context

<gbrowseImage1> name=NC_008402:11328963..11333815 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11328963..11333815 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggaggacatggcagtggcacgccattgcggcgctcggcgtcgcgtgcgcggccgccgccgccgtggccgccgataggagagccttctcggtgacctcggccgccggcggcggcgccgcggcggcggcggcggtggtggcggcgacgccggaggaagtgggcatccttcggaaggtggccaatttcttgtggcagactgatggcaactcgtaccaccacgtttggccggaaatggaattaggatggcaaatagtgctgggatcactgatcggattcttcggcgcggcattcgggagtgtgggcggcgttggaggtggtgggatctttgtgccaatgctgactttgatcattgggtttgatccaaagtcatctactgcaatatcaaaatgtatgatcatgggtgcagctgtctcaactgtctactacaatctcaagcttaaacatcctacgttggacatgccagtgattgactatgacctagccctgctgatccagcctatgctaatgcttgggatcagcattggtgttattttcaatgttttattccctgactggctggtcacagttctccttattatccttttcctaggcacatcaactaaagcttttctgaagggtgttgagacatggaagaaagagacaataatcaaaagggaggctgcaaaacgattggagcaaaccagtgaagaaccagaatatgcaccacttcctactggaccaggcgctgtagctgatgcaaaaaggccatcagatgaagcggcatcacttatgaagaacatttactggaaggagtttggccttcttgcatttgtgtggatggcattccttgttcttcaggtcacaaagaactacacagctacttgctccagttggtactggatcttaaaccttctccagatcccagtatcagttggagtgactatgtatgaagcgctgggcctgatgagcgggaagagagttctatcgtcaaagggaaatgaacagactacactgaaatttcaccagctctgcatatactgcttcttcggtatcactgcgggggtcgttggtggtctgctaggtctcggaggtggctttatcatgggtccactgttcttggaacttggcatcccaccccaggtttcaagtgcaacagccacctttgcaatgatgttctcatcttcaatgtctgttgttgagtactacctgttgaaccggttcccagtgccctatgctttgtactttgtcattgtggcattcatcgctgccattattggccagcatgtggtcaggaggttgatcaattggttaggacgggcatcgctcatcatcttcattttggctttcatgatctttgtcagcgcaatttctctaggtggagttggcatctcaaacatgattcataggatcaaccaacatgagtacatggggtttgagaacctttgcaaatatgatgcgtag</cdnaseq>

Protein Sequence

<aaseq>MGRRTWQWHAIAALGVACAAAAAVAADRRAFSVTSAAGGGAAAA AAVVAATPEEVGILRKVANFLWQTDGNSYHHVWPEMELGWQIVLGSLIGFFGAAFGSV GGVGGGGIFVPMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDY DLALLIQPMLMLGISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETII KREAAKRLEQTSEEPEYAPLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMA FLVLQVTKNYTATCSSWYWILNLLQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLK FHQLCIYCFFGITAGVVGGLLGLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMS VVEYYLLNRFPVPYALYFVIVAFIAAIIGQHVVRRLINWLGRASLIIFILAFMIFVSA ISLGGVGISNMIHRINQHEYMGFENLCKYDA</aaseq>

Gene Sequence

<dnaseqindica>370..603#968..1127#1877..2077#2164..2228#2340..2367#2447..2523#2623..2709#3172..3222#3725..3946#4024..4117#4208..4348#4434..4519#cttcacacgttcatctgcttctctctctcatctctcttctgccattgttcttgcatttcatccggttctgagagcgtctcatcgactctcttaccccggtttcttccgcggtttttcctcgtcctgtgcacgccaagatttcccaagaaacccgctcgctcgctgcccttgtacgtctcccaaatccgaaaccgcgagagaagaagaaaaaaaaaagaaagcgttttgattccgtgatttctgaattcttgttctctctcttgcggcaagaaaaggggacaagctctgaatcttttttttcttgcaaaaattctgtgtctttggagcagcagagagcgaagggcggtgcggaattggagagggagagggatggggaggaggacatggcagtggcacgccattgcggcgctcggcgtcgcgtgcgcggccgccgccgccgtggccgccgataggagagccttctcggtgacctcggccgccggcggcggcgccgcggcggcggcggcggtggtggcggcgacgccggaggaagtgggcatccttcggaaggtggccaatttcttgtggcagactgatggcaactcgtaccaccacgtttggccggtaaatacagacagaccacacctttttcttggagcttttttttttgtaaattagcattcagattctgcttcactattttgctttgaactcatgaactgttttgttaattgagggggatgggatactttttagtagtacttctttatgtttgtttcactgggatgtgtttgctgagttttgtgggtacaatgggattcagcttgagtcatgcatgttaaaactgaattattttgcaattggttaagtcttctcaggtagtttaagcttcagattgtaccttttgtgattgtgtacttttgcaattggtttttaatgttttcggacatattgtgtcaatttggtgatatattagtgttgtctataggaaatggaattaggatggcaaatagtgctgggatcactgatcggattcttcggcgcggcattcgggagtgtgggcggcgttggaggtggtgggatctttgtgccaatgctgactttgatcattgggtttgatccaaagtcatctactgcaatatcaaaatgtgaggatctaacaccactctcttgtgtgcacctgtttatgctctgaaatctgaaaggaaacagttcgtattgtcccaacaaattgatttcttaagcttgttttttggtgattcacgtgtaccttagtctgcattttttacggtatcttgtttgtccactttttggtctgtttatgcctttgcaaagtgaaagactgaaaaattgggatgcttaattatatgtcctagcagtggcagttggtgttatttccttctccgtttttgtactaggcaggttgttgtggtggttgctagtcctagattcatgtgtacatggattcctcattttcccttgtatatcaaagtacgagtagtgtatatttataaccataaatagggaatatacaaagatgaaaaggttgtgcagcaattgcactttgaagtattgatatgcaaatctaaaatacggaatatccatgaacgtctaaagggactaaaagtgtatatgcagttctgtgacttcatttcttggatttattttctacttttctttatatattaaaataataactttctggttagcttctctgtattgtggatgaaaggtgcttctccattttggggtatagataatttttctttgggattttttactttgtactgttacttggttcagtacaattcaagtaaaatctggtttttgacctgctttctcactactacatattgtaattgctaattttaatgagacattatactcttcgggacaggtatgatcatgggtgcagctgtctcaactgtctactacaatctcaagcttaaacatcctacgttggacatgccagtgattgactatgacctagccctgctgatccagcctatgctaatgcttgggatcagcattggtgttattttcaatgttttattccctgactggctggtcacagttctccttattatccttttcctaggtactcaattcattccaatgcgtctaccattgcacatctagttcctcactgataacctcagtttgcatctccgtactaaaccacaggcacatcaactaaagcttttctgaagggtgttgagacatggaagaaagagacaataatcaaaagggtaattgatttttttcgattgacttgccatctttgtaaacaatgactctcaattttcccggcttttatttcatttctggtgtactaatgggactatttccatttcttccaggaggctgcaaaacgattggagcaaaccagtaagagagctcgaaatcatagtgctgctcgtctgtcacaaaatgcaaagtctgttgcttatattttccaacctttcaggtgaagaaccagaatatgcaccacttcctactggaccaggcgctgtagctgatgcaaaaaggccatcagatgaagcggtaaattaaaatctgatgttgatacacatgatcccctgcattcttggaaccataatcataaagaatttaagtttgaatttctccaatatttcatttcaggcatcacttatgaagaacatttactggaaggagtttggccttcttgcatttgtgtggatggcattccttgttcttcaggtcacaaaggtgattgttttaacacaaagctgcacacaaagatagtaatcagtgtcaacttcatctagtttttcagtttctcaccaagtgttcacctgcaaatttgcacatatttcaagttactcctaaatcctaatattttctctgcttctttttaccctttctggccaagcattctttatattctgtgtttgcagcataatgatgtcatgatcatttatctatctattcatgtaatgtcacaataaaggtgtgaggtgaaagagcatccttttaggattatcataatccataaataatatgggtcgtcaaatcaatatatacaattaattccaccatgttgctattttgttaaaccactagggaaagccttactttttttgtgaaataaaaaaaagacaagcataaaactgacattagcactaatttattcaacagtaacactttaatgttgttttttcatttttgcagaactacacagctacttgctccagttggtactggatcttaaaccttctccaggtacttaaataacttcacatgtctgacccctttattacaccagtaatccatgctgatgtttttatcctctagaaaactgaaaccaataaaattcatcgttttacatgttggatcgacatcagattttttgaactgccttgtatattgatcttttcacatttatggattagctcacgagagatgtatcttgacttgtgtatgctggttttatgtttttttattctctatgtgaagctcatgttcttattcatccctaaaaaatggaaaccactcaaaattacatattcaaaatctttcacattgtatggtattaaggtacttttactatatatttttatgaagtagaatttcacaccacttgctggactagtgttcacaccagccccttgttttgtttacttgcacttattctggcttatggcaaaagatggatgttctatggattgtccatacatcatttaggaagagtagtatgataattctttctactggttggatgtagatcccagtatcagttggagtgactatgtatgaagcgctgggcctgatgagcgggaagagagttctatcgtcaaagggaaatgaacagactacactgaaatttcaccagctctgcatatactgcttcttcggtatcactgcgggggtcgttggtggtctgctaggtctcggaggtggctttatcatgggtccactgttcttggaacttggcatcccaccccaggtacactccatccccatttttgttgagtacttgaaagaatatatgctttggcaataatatcttaactggaactacaggtttcaagtgcaacagccacctttgcaatgatgttctcatcttcaatgtctgttgttgagtactacctgttgaaccggttcccagtgccctatggtactcctatctatttggttcacattttctatcttgcataacttgcagaaataaccatgaactgaatcaatttcttggccttttattcagctttgtactttgtcattgtggcattcatcgctgccattattggccagcatgtggtcaggaggttgatcaattggttaggacgggcatcgctcatcatcttcattttggctttcatgatctttgtcagcgcaatttctctaggtactattttctataccttactgtaattcatctaatgtcgatgcctgaacaatgactcacatggtatgatgttttttatccacaggtggagttggcatctcaaacatgattcataggatcaaccaacatgagtacatggggtttgagaacctttgcaaatatgatgcgtaggaagccatgcgtaaaaagcaagcaggcttagaagaagttaataataccataatccatttctctatcagcatcagaaccatgtggaaggagcatttcaagatttggttttccaatcatgtgaccagagagaatttggtcgtgcaacagcttggaggggaaaactgcatggattagaattcagatcaattttggagcacaaatatactgttttctagtctttagtttaagccagtacagcatgtatcacatattcacattgtatgaatcttcctgactcaggtagagttctgccagagattgcatcatcctagtctcctagatgggcattttgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0344800, RefSeq:Os09g0344800