Os11g0568700

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0568700| Description = Hypothetical protein| Version = NM_001189684.1 GI:297728498 GeneID:9267082| Length = 5597 bp| Definition = Oryza sa...")
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Gene Name

Os11g0568700

Description

Hypothetical protein

Version

NM_001189684.1 GI:297728498 GeneID:9267082

Length

5597 bp

Definition

Oryza sativa Japonica Group Os11g0568700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23044271..23049867

Sequence Coding Region

23044825..23044981,23045321..23045442,23045778..23045886,23045969..23046008,23046813..23046902
,23047016..23047115,23047224..23047363,23047958..23048060,23048235..23048746
,23048835..23049111

Expression

GEO Profiles:Os11g0568700

Genome Context

<gbrowseImage1> name=NC_008404:23044271..23049867 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23044271..23049867 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcggccatggagaagcggagggaaatccgggagcttcgcgaccggatggaccggacgctggcgctgcccgacctcgccgacgaggagttgctgagatctctcgtgaagaggcagattcttgcgtcgtcgctgtccgccggcaacgatgaaggcaatattgacctgattgctgaagcaaggtctaaagagatctcgaattttcttgaaatgctaaatacttcggggaatgaacgatcttcgaagattcatgaggcatcacataaagaatggaaggtgaagcaagacacggaccaattacgagttatgtatcgcgagggaccagaggggaccccatttcacaccctccttgctgaaggctttgctgatggaccaattgatgtttgtacatgtgtttcatgggaatcgtctctgtacaaaaaatggtttccacaatacaaccttccaacttttaaagttgctcagtcaggctgtttgaagaaggttcgggttggtgaagaaatttctttggtcagggtgaaggttccatggccagtttcggagagagaagctcttcttcactacttcgaattagagtatcttaaagaagatcttgtcattgtaatcatgaaaactatatcggatacggacaatataaatatagagacacatggatttagtagggatggaattcctgaagctggtgacaccgttcggatagatgtagtcggaggctttgttttgcaaaggattacaaaggagaaaagctttttcagggcaatagctaatatggatattaagctagacttcgttccaccatggcttatcaacttcatatcaaggcaactaattggcagcggccataaactctatcagaaggcagtcagtactgtggcaaattgtgatgaggattacaagaaagctttgagagaaccactctatgttagaatccgtgagcaccggggttctactgacatcgcaaatgtcactccagtggaggaaagggcaacagaagccctccctgacaatcccactttgcagaatgttctcgcggttactaatatcacctcgaacagtgagatagtcgaagaggagagtgaacagaaggcattattcaagctggatcatcatgcaataggcccttcaaaccctccggctgagcaagagcaacatgttgaaaataagccttacattagtcctgaggtagagcaggctttgaacatattggacaaagctattgcaattatccgaggcaacaatgctggaagtgccagtgtggtccaaaagtttatcggttacgatgtaactttagatggcagtaccactgactctagaaattcacacaatattccaaatgaacatcctgctacattgccacctcgagattcaagagagacccagcacacttattcattgtccaatgagaatgttaatcatagggagaaagatgctcttgacagtgactcgcaacgatacacaacagcttctaccgtaacaaaaactatgtccatgacaaggaggagcacgacacgggtgcacggagaagagagccttgacaccaatggcttacatcagaacggtttccacaaggacaaagagtctaaacgaacaaggaaaaggaagacaaacagttggctctgctgcttaacccctagcaccacaggatga</cdnaseq>

Protein Sequence

<aaseq>MVAAMEKRREIRELRDRMDRTLALPDLADEELLRSLVKRQILAS SLSAGNDEGNIDLIAEARSKEISNFLEMLNTSGNERSSKIHEASHKEWKVKQDTDQLR VMYREGPEGTPFHTLLAEGFADGPIDVCTCVSWESSLYKKWFPQYNLPTFKVAQSGCL KKVRVGEEISLVRVKVPWPVSEREALLHYFELEYLKEDLVIVIMKTISDTDNINIETH GFSRDGIPEAGDTVRIDVVGGFVLQRITKEKSFFRAIANMDIKLDFVPPWLINFISRQ LIGSGHKLYQKAVSTVANCDEDYKKALREPLYVRIREHRGSTDIANVTPVEERATEAL PDNPTLQNVLAVTNITSNSEIVEEESEQKALFKLDHHAIGPSNPPAEQEQHVENKPYI SPEVEQALNILDKAIAIIRGNNAGSASVVQKFIGYDVTLDGSTTDSRNSHNIPNEHPA TLPPRDSRETQHTYSLSNENVNHREKDALDSDSQRYTTASTVTKTMSMTRRSTTRVHG EESLDTNGLHQNGFHKDKESKRTRKRKTNSWLCCLTPSTTG</aaseq>

Gene Sequence

<dnaseqindica>555..711#1051..1172#1508..1616#1699..1738#2543..2632#2746..2845#2954..3093#3688..3790#3965..4476#4565..4841#cttctcctcctcctccttcctcgccgatcctcgccgccgccgccgcgcatcgccggagcaatctccattgacaagagcggtaagtagagtatctctagcttctgcttgggttggattctcctcccaattcccatatattcgcttattatgtggaaaaggctttgggaagaagaagaagaagtagtagtagtatcaagtacaagtaggcaatcttggcatctcagtgagatcgattccttggagataaattcggcaacttttatggaggtggtggagagcgtgtgctttccctcctttgcagccatgagagcataaagtctccagctttcttgccttctttgttttttttttccctcctattggcattcattcaagggtgatgggagccttttttgtggggagaaaaaggaataatcgttgggggattgattgcgtggtttcctatcttggggttttttctttgctcttggagagaaaaaggtctcatcttataccttttatatggctttgggtgaatgaaggtataggttggtgaggaggggagctagagcttgatggtggcggccatggagaagcggagggaaatccgggagcttcgcgaccggatggaccggacgctggcgctgcccgacctcgccgacgaggagttgctgagatctctcgtgaagaggcagattcttgcgtcgtcgctgtccgccggcaacgatgaaggtttgggggcttgatttggtttcttttcttcttctctggatcgagtaggttagcttgttgatgtaattaatgttgtgatttttgtgtactttagttttaccttatctgtgctgcacgtgagctgttatggttgcagttgagaaaatattctctcatgtgatgtcgtttagattctattgtttcatcgtctatgtgtgaatatcctactggttcctgaatgattgctactatttcagttgattgttttgaaagatctatttgagttgatcataatcaggctgcttgtgtgatctctctgttgttggtttttcttatgatttggttttgtatcatttttaggcaatattgacctgattgctgaagcaaggtctaaagagatctcgaattttcttgaaatgctaaatacttcggggaatgaacgatcttcgaagattcatgaggcatcacataaagaatggaaggtatgcattgaaccaaagtaaaacatttaaagaatatgttctgcgtgtatgtgattagagcacaaagaaatggatctttactttgcaccaaaaaatgtgatgtattcattgttttcttgcttacttattcatatgccatgttatgatcaatctccagagcgtaaggatgcatttatgcttgcaatttctgcctcatttatattatttgcgtcagaatttgctgttatcatgtcttcttctcccttctttttgggagtgattaaattgtctgttacattcccatgcaaattgtactatattggtgcaatgatatgcagttactctctgttctgtaggtgaagcaagacacggaccaattacgagttatgtatcgcgagggaccagaggggaccccatttcacaccctccttgctgaaggctttgctgatggaccaattgatgtttgtatgaaatctaactagtagtgagtaaaatgctatggtctcacaatacacacagtcacttaagcacactgttttttgcataggtacatgtgtttcatgggaatcgtctctgtacaaaaaatggtgagcacattcattaaggacaacttcagatgttgttcgcctagaattttgcatcgtcggacactatatttgttactaaaaaaaagttcatggaggcagcatcaggacctgcttgactcagcttttactttagcatgtggaatcaacacaaaaacttttatctagaacatggcagtacagctttttactactttttttttttgataaaggaagcttttattaatctcagacgattacatcaagttgatagaaccatactaagaaaactacttagagaatggataatctatacacaacaatttcagatattcagattatcagtttcttgtgtttttttactcaatttctttactgctgttttttgttcttcacgaagtgcactcacatgactcaatttcttgttgagttaacacatgactgttcttaattgagaagtgtactcaaatattgcctattttgcttatagcagtcactctgcgatatggcccacatgtacctactttagcaactacctgatgttgcaccattgctcatgtaaagtccctttctgcagtaagctgacaaagacaacataatgttcatttcagccatatgcataaagattggactaattgttgccaacaatgtttgcaaaaaaaaattggggataattctatggcttactttcgactactttttatgaaacataacatgtttgccagcggtatactaaagttttggcagccccactgaacccaagaaacaaaaaggatagacaaatgggtactttctttctcatatgctgatgtggtttttgtgttccaggtttccacaatacaaccttccaacttttaaagttgctcagtcaggctgtttgaagaaggttcgggttggtgaagaaatttctttggtcaggttggctaaagataaatcttctttacagtccatgatttttctacaaattttagttggattttctctttgatggatgttgtgactaacatctgcatccactatttggaagaaagggtgaaggttccatggccagtttcggagagagaagctcttcttcactacttcgaattagagtatcttaaagaagatcttgtcattgtaatcatgaaaactgtgcgtatgctgaattttctgggctatttattttttatgaaccttgatccacagacttcattgtccatgcctccagttcatttatttctgcttattgcgttgttgcagatatcggatacggacaatataaatatagagacacatggatttagtagggatggaattcctgaagctggtgacaccgttcggatagatgtagtcggaggctttgttttgcaaaggattacaaaggagaaaagctttttcaggtaaaacatccaatcctattgtgcattgaattatttaatataaagcacgaagatgcattatagatcgctccatttgctattgaaattgtacccacttttgttggaaacttggaatcaaattagtgattctgtcaaccaaagtgattttttagtgactgtaaaaggactggatgactttgtcctagaaaaaggtagagttccattaagttttttcatttttctatgacgtacttctgacttgatatgcatgttctggatacatgctataatttttattttactagttaatttttcattattaagccatgttattcctgtacttgtgagttgagctgtagaatttgttttacctgcttaattttaattgtttagcaatatataattttcatcattcttgcgtcttgaatgctagtttacatgatgtcttgactccatttttttgaacagattgttattaaatcacgtttgaactttaagaaagatataattgtatgtagtttttaaaatttattcatttgtgattctttttgctcaacaagtttcagtttaataaatatgctgatactccattttttaaccaaatcctccactcagggcaatagctaatatggatattaagctagacttcgttccaccatggcttatcaacttcatatcaaggcaactaattggcagcggccataaactctatcagaaggtcagtggcatactacctcgatacttttgtgatgatttgatatcaatatgcatagcgcttttcccattgcagtatggtctttacatagatttcgtggtactgctatgtggggtgagcaaattctgacacaagagatcccctgtttaaacacttgctattgacttatctttgcaggcagtcagtactgtggcaaattgtgatgaggattacaagaaagctttgagagaaccactctatgttagaatccgtgagcaccggggttctactgacatcgcaaatgtcactccagtggaggaaagggcaacagaagccctccctgacaatcccactttgcagaatgttctcgcggttactaatatcacctcgaacagtgagatagtcgaagaggagagtgaacagaaggcattattcaagctggatcatcatgcaataggcccttcaaaccctccggctgagcaagagcaacatgttgaaaataagccttacattagtcctgaggtagagcaggctttgaacatattggacaaagctattgcaattatccgaggcaacaatgctggaagtgccagtgtggtccaaaagtttatcggttacgatgtaactttagatggcagtaccactgactctagaaattcacacaatattccaaatgaacatcctgctacattgccacctcgagattcaaggtcagcactaaatgatattaatttcttctgtggtacatttgcactaaagttgatgcacagttattacatggtatgtttcttaatgcagagagacccagcacacttattcattgtccaatgagaatgttaatcatagggagaaagatgctcttgacagtgactcgcaacgatacacaacagcttctaccgtaacaaaaactatgtccatgacaaggaggagcacgacacgggtgcacggagaagagagccttgacaccaatggcttacatcagaacggtttccacaaggacaaagagtctaaacgaacaaggaaaaggaagacaaacagttggctctgctgcttaacccctagcaccacaggatgatgagaggcccattcagtttgctgagttaaccattgaattttgaatgcactacacaaagcagtcttaatttataaaaaaattgatagtttgcgaaatacacggggaatcgaacgacaacccaggtggcaccttgtgatagttaccaagagcagatccagtccttgataagttgtatagtagctgttgtattgttgtaacataattcccgatgatgtttctcgataatgcagatgctgggaattgtacttcatcatctaaaatgtgcaatgttgttttcatgagaattctgttatggccttatggggggttctaggtaggtacaatcctcatgaccaaacacatgatcagcttgttggtgctgatatcagtgaatgaaggaattgctatcagattttaatgacatgaacctcaccagattttcgaagtttcagtcatccttcagagattcttctgagcaacagcaacagtttgagtatggtcccagaccaagttgttgaatttcttatgtcggcagatcagtttgtctgctatttgttgaatttgatgtcggcaggtcagcttgtctgctatagagttcagttttgtttggtatggatttagcgtcttgtagatgcaagattgaacatagtgataatttgatgttttaccttttcgattgatgttttgactagagtatttgaggtgactttgaccattaacttttcatctctaaattaagatatagtaataaagatactataaagtatttctgatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0568700, RefSeq:Os11g0568700