Os11g0568800

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0568800| Description = Protein kinase-like domain containing protein| Version = NM_001189685.1 GI:297728500 GeneID:9269230| Length = 5603 b...")
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Gene Name

Os11g0568800

Description

Protein kinase-like domain containing protein

Version

NM_001189685.1 GI:297728500 GeneID:9269230

Length

5603 bp

Definition

Oryza sativa Japonica Group Os11g0568800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23053251..23058853

Sequence Coding Region

23053251..23053639,23055121..23055378,23056099..23058853

Expression

GEO Profiles:Os11g0568800

Genome Context

<gbrowseImage1> name=NC_008404:23053251..23058853 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23053251..23058853 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaagagcaacagcattgctctgctcctcactgctgttgctgtcctgtttctacgcccaggtttctccagggagcagcagcagcagcagaagtactgccatggcggatgagcctgcgctcctctcgttcaagtccatgctgctgtctgatggcttcctggcatcatggaacgcttcaagccactactgcagctggccgggagttgtgtgcggcggccggcatcccgagagggttgtggcgttgcaaatgagctcgttcaacctgtctggaaggatctctccgtcattgggcaacctgtccttgctcagggagctggaacttggtgacaaccagttcaccggggacatacctccagagatcgggcaactcaccaggcttaggatgctgaacctaagctcgaactatctccaaggaagcatcccggcttccattggagaatgtgccgagctcatgtcgattgacctaggcaacaaccagctccaaggtgagatcccagccgagctaggtgcgttgaagaatcttgtcaggttgggccttcatgaaaatgctttgtcaggagagatccctcggtctctggcagatttgcaatcgttgggcgccctatctttgttcaagaacaggctgcacggtgagataccgcctggtttgggcaatctcaccaacctctatcatcttcttcttgcacacaacatgctatcaggagccatcccatcatcccttggcatgctctctggattgtcatggcttgagctaggcttcaacaatctaaccgggctgatcccctcttccatctggaatgtttcctctctgacagagcttaatctccagcaaaacatgttgcatgggacgatgcctcctgatgtgttcaactctcttcctcatctgcagcacttgtacattaacgacaaccagtttcatggcaacatccctgtatcaataggtaacgtgtccgctttgtcgcggatacagattggtttcaactctttcggtggaatcattcctccggaggttggaaggttaagaaacctcacttcgctagaagctgagcacacattccttgaagctaaagatcagaaaggatggggattcatatctgcgttaacgaattgctccaagttgcaagctttgttcctgggcaacaataggtttgaaggggtacttcctgtttcaatctcaaacctttcagtttatcttgaatacctctatcttgattttaatgcaatatctggaagcttgcctgaagagattggtaacctcgttaggttagaagctcttctactccataacaactctttcacgggaattcttccgtcatcgttgggcaggcttaaaaatctgcaagttttatatatagacaataataaaataagtggatcaatcccattagccatagggaatcttacagaactaaattatttccgccttgatgtgaatgccttcactggtaggataccaagtgcacttggaaacctgacaaacctagtggaactaggtctttcaagcaataatttcacaggttctattcctgttgaaatatttaagattcacacgttgtcgttaactttggatatatccaataacaacttggaaggatcaataccacaagaaatcgggggcttgaaaaatcttgttcaattctatgcagattccaacaagttatcaggtgaaatccctagcacccttggtgaatgccaacttctccagaatatatctctccaaaataatttcttgagcggtagcgttccatcactcctgagtcaattgaaaggtctacaaattcttgatctttccaataacaacttgtcaggtcaaatacccacattcctgtcaaaccttaccatgctcagttatctcaacctttcattcaatgactttagtggtgaagtaccaacttttggtgtcttttcgaatccttccgcaatttccatccatggaaatggcaaactttgtggtggcataccagatctacatttgcctagatgctcttcacagtcaccacacagaaggcaaaaacttctggtaattcctattgttgtttctcttgctgtaacattactactcctcttattgctctacaagcttctctattggcgtaagaatataaaaacaaacatcccatctaccacatccatggaaggccatcccttgatctctcactcccagctggtaagagcaacagataatttctcagcaaccaatttgttgggatcaggatcatttgggtctgtgtacaaaggagaaataaataatcaagctggtgaaagtaaagatatagctgtgaaagtgctaaaactccaaacccctggcgcactcaaaagtttcatagccgaatgcgaagcactgcgaaacctatggcatcggaaccttgtcaaaataattacagcttgctcaagcattgataacagtggcaatgacttcaaagcaattgtgttcgagttcatgcctaatggcagtttagatggttggctacatcctgacaataatgatcatacagagcaaaggtacttgaatatcctggaaagagtgagcatactccttgatgtggcttatgcattggattatcttcattgccatggccctgcccctgtgatacattgtgatattaagtcaagtaatgttctcttggattctgacatggtggctcgtgttggagactttggacttgcaaggattcttgatgagcaaaactcagttttccaaccctcgacgaactcaatactatttagagggacgattggctatgctgccccaggcgtcgccggcgaacctgatagaccgcaatgctcagaggtttcagcacatccgtgctcgcggcggcgtcaggacactggatcggacgctgaacgatgcatgcggcatgcccgatctgctagctcaggatggtggccggcgactgtccgcacgctctcctgcgggcatgacttccacgaggattgcaacatcgcgaagtggctccgtgacaacaagaaggcctgcccagttcattctgcttgtaatattcagttgtatgaatatggtgctgggaatactgtgtcgacgcaaggtgatatttacagctacggcattcttgtgttggaaactgtaactgggaagaggcccagtgacagcgaatttacacaaggattgagcctctgcgagtctgtaagtctgggtttacatggtaaagtgatggacattgttgacaacaagctgtgtctgggcattgatcagcatgatcctgagacaaccgatgatttttcaagcaagcaaaagatcgattgcctgatttcattacttagactaggactttcttgctcccaggaaatgccatcgagtagattatcaactggagatatcattaaggaactgcatgcaatcaaggaatctctcttgctggaaatagaggatacagaaaaatga</cdnaseq>

Protein Sequence

<aaseq>MARATALLCSSLLLLSCFYAQVSPGSSSSSRSTAMADEPALLSF KSMLLSDGFLASWNASSHYCSWPGVVCGGRHPERVVALQMSSFNLSGRISPSLGNLSL LRELELGDNQFTGDIPPEIGQLTRLRMLNLSSNYLQGSIPASIGECAELMSIDLGNNQ LQGEIPAELGALKNLVRLGLHENALSGEIPRSLADLQSLGALSLFKNRLHGEIPPGLG NLTNLYHLLLAHNMLSGAIPSSLGMLSGLSWLELGFNNLTGLIPSSIWNVSSLTELNL QQNMLHGTMPPDVFNSLPHLQHLYINDNQFHGNIPVSIGNVSALSRIQIGFNSFGGII PPEVGRLRNLTSLEAEHTFLEAKDQKGWGFISALTNCSKLQALFLGNNRFEGVLPVSI SNLSVYLEYLYLDFNAISGSLPEEIGNLVRLEALLLHNNSFTGILPSSLGRLKNLQVL YIDNNKISGSIPLAIGNLTELNYFRLDVNAFTGRIPSALGNLTNLVELGLSSNNFTGS IPVEIFKIHTLSLTLDISNNNLEGSIPQEIGGLKNLVQFYADSNKLSGEIPSTLGECQ LLQNISLQNNFLSGSVPSLLSQLKGLQILDLSNNNLSGQIPTFLSNLTMLSYLNLSFN DFSGEVPTFGVFSNPSAISIHGNGKLCGGIPDLHLPRCSSQSPHRRQKLLVIPIVVSL AVTLLLLLLLYKLLYWRKNIKTNIPSTTSMEGHPLISHSQLVRATDNFSATNLLGSGS FGSVYKGEINNQAGESKDIAVKVLKLQTPGALKSFIAECEALRNLWHRNLVKIITACS SIDNSGNDFKAIVFEFMPNGSLDGWLHPDNNDHTEQRYLNILERVSILLDVAYALDYL HCHGPAPVIHCDIKSSNVLLDSDMVARVGDFGLARILDEQNSVFQPSTNSILFRGTIG YAAPGVAGEPDRPQCSEVSAHPCSRRRQDTGSDAERCMRHARSASSGWWPATVRTLSC GHDFHEDCNIAKWLRDNKKACPVHSACNIQLYEYGAGNTVSTQGDIYSYGILVLETVT GKRPSDSEFTQGLSLCESVSLGLHGKVMDIVDNKLCLGIDQHDPETTDDFSSKQKIDC LISLLRLGLSCSQEMPSSRLSTGDIIKELHAIKESLLLEIEDTEK</aaseq>

Gene Sequence

<dnaseqindica>5215..5603#3476..3733#1..2755#atggcaagagcaacagcattgctctgctcctcactgctgttgctgtcctgtttctacgcccaggtttctccagggagcagcagcagcagcagaagtactgccatggcggatgagcctgcgctcctctcgttcaagtccatgctgctgtctgatggcttcctggcatcatggaacgcttcaagccactactgcagctggccgggagttgtgtgcggcggccggcatcccgagagggttgtggcgttgcaaatgagctcgttcaacctgtctggaaggatctctccgtcattgggcaacctgtccttgctcagggagctggaacttggtgacaaccagttcaccggggacatacctccagagatcgggcaactcaccaggcttaggatgctgaacctaagctcgaactatctccaaggaagcatcccggcttccattggagaatgtgccgagctcatgtcgattgacctaggcaacaaccagctccaaggtgagatcccagccgagctaggtgcgttgaagaatcttgtcaggttgggccttcatgaaaatgctttgtcaggagagatccctcggtctctggcagatttgcaatcgttgggcgccctatctttgttcaagaacaggctgcacggtgagataccgcctggtttgggcaatctcaccaacctctatcatcttcttcttgcacacaacatgctatcaggagccatcccatcatcccttggcatgctctctggattgtcatggcttgagctaggcttcaacaatctaaccgggctgatcccctcttccatctggaatgtttcctctctgacagagcttaatctccagcaaaacatgttgcatgggacgatgcctcctgatgtgttcaactctcttcctcatctgcagcacttgtacattaacgacaaccagtttcatggcaacatccctgtatcaataggtaacgtgtccgctttgtcgcggatacagattggtttcaactctttcggtggaatcattcctccggaggttggaaggttaagaaacctcacttcgctagaagctgagcacacattccttgaagctaaagatcagaaaggatggggattcatatctgcgttaacgaattgctccaagttgcaagctttgttcctgggcaacaataggtttgaaggggtacttcctgtttcaatctcaaacctttcagtttatcttgaatacctctatcttgattttaatgcaatatctggaagcttgcctgaagagattggtaacctcgttaggttagaagctcttctactccataacaactctttcacgggaattcttccgtcatcgttgggcaggcttaaaaatctgcaagttttatatatagacaataataaaataagtggatcaatcccattagccatagggaatcttacagaactaaattatttccgccttgatgtgaatgccttcactggtaggataccaagtgcacttggaaacctgacaaacctagtggaactaggtctttcaagcaataatttcacaggttctattcctgttgaaatatttaagattcacacgttgtcgttaactttggatatatccaataacaacttggaaggatcaataccacaagaaatcgggggcttgaaaaatcttgttcaattctatgcagattccaacaagttatcaggtgaaatccctagcacccttggtgaatgccaacttctccagaatatatctctccaaaataatttcttgagcggtagcgttccatcactcctgagtcaattgaaaggtctacaaattcttgatctttccaataacaacttgtcaggtcaaatacccacattcctgtcaaaccttaccatgctcagttatctcaacctttcattcaatgactttagtggtgaagtaccaacttttggtgtcttttcgaatccttccgcaatttccatccatggaaatggcaaactttgtggtggcataccagatctacatttgcctagatgctcttcacagtcaccacacagaaggcaaaaacttctggtaattcctattgttgtttctcttgctgtaacattactactcctcttattgctctacaagcttctctattggcgtaagaatataaaaacaaacatcccatctaccacatccatggaaggccatcccttgatctctcactcccagctggtaagagcaacagataatttctcagcaaccaatttgttgggatcaggatcatttgggtctgtgtacaaaggagaaataaataatcaagctggtgaaagtaaagatatagctgtgaaagtgctaaaactccaaacccctggcgcactcaaaagtttcatagccgaatgcgaagcactgcgaaacctatggcatcggaaccttgtcaaaataattacagcttgctcaagcattgataacagtggcaatgacttcaaagcaattgtgttcgagttcatgcctaatggcagtttagatggttggctacatcctgacaataatgatcatacagagcaaaggtacttgaatatcctggaaagagtgagcatactccttgatgtggcttatgcattggattatcttcattgccatggccctgcccctgtgatacattgtgatattaagtcaagtaatgttctcttggattctgacatggtggctcgtgttggagactttggacttgcaaggattcttgatgagcaaaactcagttttccaaccctcgacgaactcaatactatttagagggacgattggctatgctgccccaggttagtctgtttcttgttcttcaaatgaagcccacatttatacaataatattagagcaatgctccggtgctttctacttggagtattatactacaagtaaaattaatctcgaccgttcattttaaagggtagattagtaatctcctaatatatattaggggcaattttggcaggatctattttctctgtctcggtcggtcttggcttgatcgcatcaggtccgacgaaaagcaccgcatctcgcccgacgcacgttgcttatcgctactcctcccggcacgccgtggctcggtgcggtgaaaccctcaggcgtcccctcctcccacctctcacctgtctatccgttcctcctcctctcctgtattccacgtcggcatcctggttcgccatcgtggccttctgtccgctgcgagtggccttccgcgcgcgtccgatttcgccggagcccctgcgcaagacctaagattcttggcagcgcccactttggaggattcaatccattccgccggcgggtagtgatctccattccgtgttgctctgattgtgtgggctgcggccacttgggaggcagctgcgatacattccagcgccgtatccccggtccccctccgtgcgtgcccgagtcttgtggcttgcatcggcgagcacctcctcgaccgcgagcacggcatgagatgcagaatatgcaacagtgtcgctcgctgcgtgttgccgtggaaggcgtcgccggcgaacctgatagaccgcaatgctcagaggtttcagcacatccgtgctcgcggcggcgtcaggacactggatcggacgctgaacgatgcatgcggcatgcccgatctgctagctcaggatggtggccggcgactgtccgcacgctctcctgcgggcatgacttccacgaggattgcaacatcgcgaagtggctccgtgacaacaagaaggcctgcccagttcattctgcttgtaatattcagttgtatggtgtgtcgaatacttcattgactaattgacgagctttgagatactgatgtttattggatcttgtgactgtcccaatatattcattgttcagtaatggtttaagtaaaaaagaaaaggtgaatagtgatggactactagtaatgtcaatgtgttgaccatgttagtgtgttgtgcattttttttgtgtgcaactgtgatggggtgagatgaatccaagcaatttgaactgaaatatgtcatcctgctcctggatcagtaaacaagttgttttgctcctgaaagagtgagactgaaaaaatctgataaactgcttaaatgagatttttcactatcagagttttgcccatatgtaaattgcatttcagtcagagctgtaattcaggatttgttttatatttcataccatcgaaacatctaactgcattctgtcatattctggcgctctgaatcatcgctacatgattcctttcttgtgctcatatgggggtagctaagccctcaattgccactaaattgattttttttcagtcataggacaatgtctactaatgggggcttagaacatcttgattcactctttgctgcaaactccctggtctactgtcgtgtttatgcaaaagcatttgcattagctccgcggcagcttgtgaagtcatgcacagtccctattcatgtagcatccaaacacctcattcccaagtcccttagctgctcgtacggtcgccggcggcgaccaaatgccaccgcctcactcgagctccgccactgcacgtcgccggctgccatagctcatttcttggccaatccgagccgtccaccacatccccatactacactcgttcattcccagttgcccattcctcctacctcgccgccgttcgccggaacccgttgaatttcgtccgccgtccaattgcccggcgatctcctgtcttggtcaaagctacatggcaggactagtcgtccgccgtgggcaaggaccttcagcggcttggcgaagaggagaagggccacccttggtcgctggagggggaggagatgtcgatcgcgctggagatgatggaggcggagagggagatggacaagcgacgaagtcaacgatggatggggtcagccgcttgagaatggcgaaggtttagagttactgaataataatttacgataatacccttacatgaattattatctatggacaaatatacccctccacgtttctactaccactatgagtggtggtagtagaattagatctcaaccctacgattatatacgatcaacggctcggattattttctactataagtagaaagcaccggagtgaggctcataatattatgggccatttgcagatgaaattagttttaggggaagcattgaatttttatttttacctaattgtatatcagtacaacttatggtaaatttatagctatacaagttataagaattctaatatttctggggaatgttcgatgcaacagaatatggtgctgggaatactgtgtcgacgcaaggtgatatttacagctacggcattcttgtgttggaaactgtaactgggaagaggcccagtgacagcgaatttacacaaggattgagcctctgcgagtctgtaagtctgggtttacatggtaaagtgatggacattgttgacaacaagctgtgtctgggcattgatcagcatgatcctgagacaaccgatgatttttcaagcaagcaaaagatcgattgcctgatttcattacttagactaggactttcttgctcccaggaaatgccatcgagtagattatcaactggagatatcattaaggaactgcatgcaatcaaggaatctctcttgctggaaatagaggatacagaaaaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0568800, RefSeq:Os11g0568800