BGIOSGA021249

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Revision as of 12:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021249| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021249, complete gene.| tag = P0021H1...")
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Gene Name

BGIOSGA021249

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021249, complete gene.

LocusTag

P0021H10.8-1

Ensembl Transcript ID

BGIOSGA021249-TA

Ensembl Protein ID

BGIOSGA021249-PA

Length

5422

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:16703244..16708665

Sequence Coding Region

16708648..16708665,16707855..16707955,16706847..16707009,16706086..16706295,16705740..16705917
,16705516..16705622,16704911..16705130,16703244..16703383

Genome Context

<gbrowseImage1> name=IndicaChromosome06:16703244..16708665 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:16703244..16708665 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATATGTGTGGGATATCAAGGAGCTGAAGGAGAAGATGCTAGGCTCTGGAATGCCCTGGCCTGGAGATGAAGGTGACCAAAACGTTGGGAGCAAGCATGGATGGCAATTAAAAAGTGTCCCTATGGATCAGGAAGATGAAGTTGTACTCGACTACACCACAGACCCCCTCATTACAGATCAGGGATCCAAAAATCAATCCTCTCGAGCATTGCACGGGCTGGTCATGCCATTGAGGATTTCTATGGGTCACCACAGGGCACAGGATGTTGAGGGTGCACTCCAAAATGGATCAGTTCAGTATGAACTGATTAGACCAATCAAGTACAGACCAAGGAGCATCATCAGGTGCTGTAGCACTACAAGGGGAAAAGCCAGGGAGGACTACTACCAAGTGCTGGGAGTGACGGTTAATTCAACGCCTCAGGAGATCAAGGAGGCTTACAGGAAGCTTCAGAAACGACACCATCCTGATATTGCTGGCTACAAGGGTCATGACTACACCCTACTGCTGAATGAGGCATACAAGGTGTTGATGAGAAATAGTCCCAGGAACGCTTGTGCTAGTGGCAGAGGCTTTGGCAGAGGTTTCACTGGAAACGGGTACAGTTGTTGGAATGGGCCTGTGAGAAGCCATGCACTCTTTGTCGACGAGAACAAATGCATAGGATGTAGGGAGTGCGTCCACCATGCCGGAGAGACATTCGCGATGGACGATGTTCTTGGAAGCGCTCACGTCGAAGTCCAGTTTGGAGACCAGGAGCAGAAGATACAGGTAGCTGTGGAGTCGTGCCCAGTGAACTGCATCCACTGGGTGATGAGCGAGGAGCTAGCGGTGCTGGAGTTCCTGGCACGGCCACAGCAGAAGGAAGCGCACGGCGTGTTCGGCGGCGGGTGGGAGAGGCCCCGGGACGTGTTCGCTGCGGCCAACTTCACCAAGAGGCTCCAGAGAGAGGAGCAACAGGACATGGCACGGCAGCAACGCTACAATAATGGTGATGCATGCGAGGAAGGTGAAACCGAACGGCAGGCCGAGGCGAGGCGTCGCGCAGGGCAGGAGCTCCGGTGGAAGCGTTTGCGCGATGTGTGGAATGGGCTGAGGGACTGGACGAAACCTGGTGTGGACGGCCCGTAG</cdnaseq>

Protein Sequence

<aaseq>MGYVWDIKELKEKMLGSGMPWPGDEGDQNVGSKHGWQLKSVPMDQEDEVVLDYTTDPLITDQGSKNQSSRALHGLVMPLRISMGHHRAQDVEGALQNGSVQYELIRPIKYRPRSIIRCCSTTRGKAREDYYQVLGVTVNSTPQEIKEAYRKLQKRHHPDIAGYKGHDYTLLLNEAYKVLMRNSPRNACASGRGFGRGFTGNGYSCWNGPVRSHALFVDENKCIGCRECVHHAGETFAMDDVLGSAHVEVQFGDQEQKIQVAVESCPVNCIHWVMSEELAVLEFLARPQQKEAHGVFGGGWERPRDVFAAANFTKRLQREEQQDMARQQRYNNGDACEEGETERQAEARRRAGQELRWKRLRDVWNGLRDWTKPGVDGP</aaseq>

Gene Sequence

<dnaseqindica>1..18#711..811#1657..1819#2371..2580#2749..2926#3044..3150#3536..3755#5283..5422#ATGGGATATGTGTGGGATGTGAGAGGACGTGGTAACCAGAGAAAGTAGATGAGAGGAATAGATTGAATTCGGCTTGATCTTTATTGATTGAATGCGTGCTTATATAAGCTTACATGCCAACTGAATTGCTAATTAAAAGGTATAATAACTAATGCAACAAAACCGGATCCAACTAAACGAATTCGAGATGAAATCCTATTGCCAAACCATACTGTAGCGCGTCGGACACGCTCCATTCACGCCGCCGTTGCGCGATCCGACTGATCGCCCTCATCACGCGCCGTTGTTCCCGCGTGTTCCACATTCCTACGCCTCCGCAGGGATTGCAATTTCGAAACTATGTTTTTTGCCGGAGGGGGCCAAAAGAACCGAAATTCGGTTTTTTTTTGGACCGAAACTATTTAAAAATTTGACAAATTTTAAATGAATTTGAATAAACTTTGATCAAAGTCACAAAAAAAGGAAATACCCGAAAATTTCAGGAAAAATATTTGCTTGCCCGGGGGGGTGGGGGGGGGGGGATTTCCGAAATATCAATCACTGCGCCTCCGCTGATATCCAATTCTGACCATGATAAAAGCTGATTAAGTATTCTTCATCTTTAATTTGCATAAACTCCTGTTTGCATTTATTCGAATCAAAAACCTAAATCTTTACTTTGTTTACATTTTCTGTTTGGAAGAACAAGGCTTATTTCATTTGTTTACCAGATCAAGGAGCTGAAGGAGAAGATGCTAGGCTCTGGAATGCCCTGGCCTGGAGATGAAGGTGACCAAAACGTTGGGAGCAAGCATGGATGGCAATTAAAAAGGTCTGCTGCCCTATCATTCATACCAGAGATAGATCCAGACTTATATCTCTCTTAGTCCTTTTCTTTTAGCTCTTTAGAAACATCATGGTCATTATTAAGTCATAGGTTTTACCAGTTTAAATAATGGAATTGGACTTCTTTGCATATAACTTCAGCTTCTTTGCATACAGTACATTTTCTCATAACATACTCATGGGATCATTTGACACCACAAATGGCACCTGGATTTGTTATAGGTAGGGAGATTTATTAATCATAAAATACGAATGTTAAAGAAACCCTTTTTAAAAGTGGTCATCAGATATCTAACTTAATTGTATTTAGGTTTGGGCGTTAAAATGGAATGAAAGAGCATATTTTAGCACTCGCAAGGTGAAGCTTGATCATGACTACCTTTCCATGACTCTACTTGTACAAGAAATTGTCAACGCAGACTATGCCTTTGTCATTTACACTACTAACCCATCATCGGGAGATTCGTCTGAGATATATGCTGAAGTGGTGAAAGGGCTTGGAGAAACACTTGTAGGACAGTAGGAGCCTATCCTAGTCGCGCCATGAGCTTCGTATGTAAGAAAAACGACCTTGACTCTCCCAAGGTAAAAGCTACCACTTGAAATTATCCTATGTTAAGGTCTACCTGAGCTAAATGCATTCCATTTGATAGGTACTGGGTTTCCCAAGCAAGCAAATTGGTCTCTTCATAAAGAGATCAATCATCTTTCGTTCAGATTAGGGTATGCTGGAGCAGCAGTATATGATAGGTTAGAGAAAGTCCGCCATAATTTTTGTAGTTTGCTCAAGAATTTATTTGGCATTACAACTAAGCTGACTGCTTGTTTCAGTGTCCCTATGGATCAGGAAGATGAAGTTGTACTCGACTACACCACAGACCCCCTCATTACAGATCAGGGATCCAAAAATCAATCCTCTCGAGCATTGCACGGGCTGGTCATGCCATTGAGGATTTCTATGGGTCACCACAGGGCACAGGATGTTGAGGGTGCAGTGAAGGAAGGGAAGCTATAAGTAGTACAGACAAGACCACAGATGTAATCTATATGTATATTTTATAGCCAAGTCAATCAGGAAATGTTGTAGAGTAAGATATACGGGCCGTGGGACATGTATAACACGTTATGCTCCTTTTTTTTTAAAAAAAAATTGCTTGCATACTCACAGTACACTAATTTCTAGGGCTTGTTTTATCGCCAATAAGTGTAATCTGTCAATGATCATGAATAAGCCTCCTAGGCTACTGAAAGCCATTAAAGGTCATTTTGATCAACTGGATTTTGCTTCTGCAATAATAATGTAAATATCAGTAGTCTGCTTGCTTTTGGTCCTATCCTTTGTAGTCAAGAAGTTGAAAAGTATCAGTAAGTTCTTGTAAATATCTGTTCTCTGAAATGGACAGCTACATGGAGATATCTGAAGCAAATATCTAAAGAGAGCTATCCCCAGTCGACCGGAACCAAATACTGAAAGGCACAAGAGGAAAGACAGAAATGGTGGGGTTCTTCAGCCTCTGTTCTTCCACTCATTATTATCATTTGCAGCTCCAAAATGGATCAGTTCAGTATGAACTGATTAGACCAATCAAGTACAGACCAAGGAGCATCATCAGGTGCTGTAGCACTACAAGGGGAAAAGCCAGGGAGGACTACTACCAAGTGCTGGGAGTGACGGTTAATTCAACGCCTCAGGAGATCAAGGAGGCTTACAGGAAGCTTCAGAAACGACACCATCCTGATATTGCTGGCTACAAGGTGTGTCGTCCATCCGCATCTACTTCGGTTTGGTGTTGCTAGCTACAGGGTTCGGTTTTTAGTTTCTTGGAAGCTCGGATAGAAATTTTATACCTTTTACCGATATATCAAGCTTATTTTGTTCTTGCTTGTGGAGTTTAAATGTGAAGTTGGCACTTGAATTTTCAGGGTCATGACTACACCCTACTGCTGAATGAGGCATACAAGGTGTTGATGAGAAATAGTCCCAGGAACGCTTGTGCTAGTGGCAGAGGCTTTGGCAGAGGTTTCACTGGAAACGGGTACAGTTGTTGGAATGGGCCTGTGAGAAGCCATGCACTCTTTGTCGACGAGAACAAATGCATAGGTACGTAGCATCAACATTTCTGATCACAAAGACACGACCCTTTTTTTTCCACAGATAGATGGTTCATGAAAAGAACAAAAACAACTAGATTATTGATGCACCGTGCACCGTATGTAGGATGTAGGGAGTGCGTCCACCATGCCGGAGAGACATTCGCGATGGACGATGTTCTTGGAAGCGCTCACGTCGAAGTCCAGTTTGGAGACCAGGAGCAGAAGATACAGGTACCATAGATTGTTCGAGTTTCTGACGAAGCATACACTGTCACTGGAACTGTTTGAGTCACTATTAATTGGAGATCTGTAGCTCAATGGACGTGCTTGTTTTACTTTGTGGCTTATCCAATTTTTAATTTTAATTTAATTTAGGTGTTTTTTCATGGATTTCTATATTCAGTCTTGGCTTGAGTATATGAGTATAAAAATATTACGCTAAATTGTTTTTCGTTTCTTTAGTGACTTCAGTAACGTGTCTTCTGCCTGTAAAGTTGCTGCCATAAAAGTGCCTTCTAAACATGCCAAATAAATTAATCTAATATATAATTTATTTTCCATGGCTGATCGATCCGCCGATTAATTCACCATTGAATTGATGTGCATGCAAGGGCAGGTAGCTGTGGAGTCGTGCCCAGTGAACTGCATCCACTGGGTGATGAGCGAGGAGCTAGCGGTGCTGGAGTTCCTGGCACGGCCACAGCAGAAGGAAGCGCACGGCGTGTTCGGCGGCGGGTGGGAGAGGCCCCGGGACGTGTTCGCTGCGGCCAACTTCACCAAGAGGCTCCAGAGAGAGGAGCAACAGGACATGGCACGGCAGCAACGCTACAATAATGGTAAAAAGAAATAACTGAAACCAAACGAACAGCTTCTAGCAGCTGTGAACCAGAAAAATAACGAAGAAGTCCAAATTACTCTCTTAACCACAAAACCAGACATCCTTCACCCTTAGGCTCGCTTTAGAGCAGTTTCGGTCTAGTTGATGCTTAGCATAAAAGAATTAAGAAAAGCGATTTTATCCACACATCAGTTTGACCTTCTTAAGTTTTTTTTAAAAAAATGTTCAAACCCACAAATCAAATCTGACATGTGAGTCTCACCGTTTTTATTCTTTTTATGCTAACCAGACTACCACGTGTGTGTCACATGATTTTTTTTAGAGAAGGGTATTTTTTACCCGGTCTCTACATCCAATCGGATATATGCAGTCATTTAAATTAGGAACTTAGCCCCGCAAACAACCCAATCTGAAATTCGCTTCGATGAAGATTTGAACTTAGAACCTTGGGGTACTACTCAGGTCACATGATAGTACCAAAATCGCTCCAAAACAAGTCAAGGAGATAATTTGTCCAATATAAAAATTTGAGGGTGAAGAATGTCTGATTTCATGGTTTAGAGGGGCAATTCGTACCGTCGCTCTAATTTAAAGTTGTACTTTTTTCCAAAAATAATGAAAAGGGAAAGAAAATTGATTTATTAAAGGGTTATTAGAATGTCAGGAAGTCAAGCGAGACAATATTTTGAATGCCATTTTATCGAAGCTAACTTTCGGAGTGCCAAAATGTGGAAACCGCATTTTAGAGTGTTAATAGAGCAATTTTCTCAGAATTTATATATGATTTTCACATTAATTAGTTCGATCCTATAAACCATTTTTAATTTTTTTTCTATATTCAAAAAAATGTAACGAAAAAAATATTCCCTCCATTTTATATTATAAGTCGCTTTGAATTTTAACCTAGCCAAACTTATTTAAGTTTAATCAAATTTATAGAAAAATTTAGCAACATCTACATAGAAAATTAGTTTCATCAAATTGAGCATTAAATATATTTGAGTAAATTGCATTTAGGGCCACCTTTTATCACCAAAGTTCCCCTTTGGACTACCCTTTAAACCATTTTTTCACTTTGGACTAGATTAATTTGCCTCTGTTTTACTTTGAACCACCCCAAAAACTTTTCTCGAGCACATAAATGACTTTAACCACATCGGCACCCATAAACCAATAATCTTTCCGACTTATATATAGACTATTCTTCGTAAGATTAGAGGGTAGATGTAGCTAGAAAAGTGACTTAGGGTGGTCCAAACTGCAACAAAGGTAATCTTACCTAGTCTAAAGTGAAAATATTAGCTAGAGGGTGGTTCAAAGTGAAACTTTGGTAATAAAAGGTGGACCAAAGTGCAATTAACTCTATAATATATTTTAATAGTATATTTATTTGGTGTTAGAAACATTTTTATGTTCTTTTTTTTTGTAAAATTGGTTGACTTAGAAAAAAAAATCAAAACACGATAGAATGCAGGGAGTAGAAAATTAAAAACGTCTACTTGAGCAACCGTTAATATTGTTGCAGGTGATGCATGCGAGGAAGGTGAAACCGAACGGCAGGCCGAGGCGAGGCGTCGCGCAGGGCAGGAGCTCCGGTGGAAGCGTTTGCGCGATGTGTGGAATGGGCTGAGGGACTGGACGAAACCTGGTGTGGACGGCCCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021249