BGIOSGA021280

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Revision as of 12:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021280| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021280, complete gene.| tag = P0526E1...")
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Gene Name

BGIOSGA021280

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021280, complete gene.

LocusTag

P0526E12.23

Ensembl Transcript ID

BGIOSGA021280-TA

Ensembl Protein ID

BGIOSGA021280-PA

Length

6784

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:15516716..15523499

Sequence Coding Region

15522997..15523499,15521194..15521311,15520994..15521101,15520733..15520905,15520560..15520659
,15520374..15520448,15518718..15518848,15518263..15518398,15517692..15517811
,15517459..15517605,15517268..15517372,15517094..15517195,15516716..15516964

Genome Context

<gbrowseImage1> name=IndicaChromosome06:15516716..15523499 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:15516716..15523499 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAACCCATGTCCTCCTCGCCGGCCGCCAGCCGGCGAGCCGCAGCGATTGCCCGCCACCTCGCCGGCAATCCGGCTGCCAAATTCGCCTCCCTGCTCGAGCCATTCTCCTGCCTGGGCTACGTGCCGCCGGAGTCCAATGAGCAGCCCCCGGCGTTCGCGCTAGGCGACCTCCGGAGGCTGCTCGACGGGCACGACCTGGGCGTGCGGGACTGGATGTTCCGCGTCATGGAGCAGAGCACATTGTTCTGCAGCCGGCACGGGGGCCCCGGACCTGCAGGCAGGGTGTTCGCATCGCCGGACTTCAACAAGGACAAGGAGGGGCTGCGGGAGGCGACGATGAGGCGGATCGGGTACCTGGCGCGGCGCGGCGTATTCCGTGGATGGCTCACAGACACGGAGGGCGACGCCGAGGCCGAGCTCCGCAGGATCGCGCTCCTCGACTGCATTGGCGTCTACGATCACTCGCTCGCCATCAAGATCGGCGTCCATTTCTTCCTCTGGGGCAGCGCAATCAAGTTTCTTGGAACAAAGCGCCACCATGACAAATGGTTGTCGGACACAGAAAATTATGTTATCAAGGGTTGTTTTTCCATGACAGAACTGGGTCATGGGAGCAATGTCCGAGGAATTGAGACAGTGGCTACTTATGATATTAAAACAAGAGAGTTTGTGATAAATACTCCTTGTGAATCAGCCCAGAAGTACTGGATTGGTGGAGCTGCTAATCATGCTACACATACTATAGTCTTTGCGCAGCTCCATATAAATGGGAGAAATGAAGGAGTCCATGCTTTTGTAGCTCAGATTAGGGATGAACATGAAAATGTTATGCCTAATATCCAGATAGCTGACTGTGGCCATAAAATTGGATTAAATGGTGTTGATAATGGACGAATTTGGTTTAACAATATACGTGTTCCTCGAGAGAATTTGCTGAATCTTGTTGCTGATGTTTTGCCGGATGGGCAATATGTTAGCACGATAGATGACCCTGATCAGAGGTTTGCAGCATTTTTATCTCCACTTACACTTGGTCGAGTTAATATTGCAGTTAATGCGGTTTATATTTCAAAGGTTGGCGTTGCAATTGCTGTGAGATATGCTTTGTCAAGGAGAGCCTTTTCAGTTACACCAGATGGTCCTGAAATGCTGTTACTTGATTATCCCAGTCACCAGCGACGCCTTCTACCACTGCTAGCAAAAGCATGTCTGATGAGCAGTGCTGGTAATTTTATGAAAAGGATGTATGTGAAGAGGACTCCTGAACTTAACAAATCTATACACATTTACTCTAGTGCTCTTAAAGCTACACTTACCTGGCAGAATATGACCACACTTCAGGAGTGCCGTGAAGCTTGTGGTGGCCAAGGTTTGAAGACAGAGAATCGCATAGGAATTTTCAAAGCTGAATTTGATGTCCAGTCTACATTTGAGGGCGACAATAATGTTCTAATGCAGCAGGTAAGCAAAGCCCTTTATGCTGAATTTTTGACAGCAAAAAGGAAGAATCAACCATTCAAGGGATTGGGCTTGGAACACTTGAATGGTCCTTGCCCTGTTATTCCTGATTATCTGACAAGTGGCACACTAAGAAGCTCCAGTTTCCAGATGGACTTGCTCTGCTTGAGGGAGCGAGATTTACTGAAACGATTCACCACGGAGGTTTCTAATTATCTGGCACAAGGAGAAAACAGAGAGAAGGCTTTGATGCTGAGCTACCAACTCGCTGAAGACTTAGCTAGAGCATTTACTGAGCGCACAATTTTGCAAATATTTTTGGAGGATGAGAAGAATATTCCTACTGGTTCTTTAAAGGATATATTGGGCTTACTAAGGTCTTTATATGTTATGGTTTGCATAGACGAATCTGCATCCTTTTTGAGATATGGTTGCCTATCGCGAGAGAATGTAGCCGCTGCTAGGAAAGAAGTGATGACACTGTGCAGTGAACTCAGGCCCCACGCACTTGCTATTGTCAGTTCCTTCGGAATCCCAGATGCCTTCCTTAGCCCACTCGCTTTTGACTGGATTGAGGCAAATGCACGGTCTTCTGGGAATGAATGA</cdnaseq>

Protein Sequence

<aaseq>MEPMSSSPAASRRAAAIARHLAGNPAAKFASLLEPFSCLGYVPPESNEQPPAFALGDLRRLLDGHDLGVRDWMFRVMEQSTLFCSRHGGPGPAGRVFASPDFNKDKEGLREATMRRIGYLARRGVFRGWLTDTEGDAEAELRRIALLDCIGVYDHSLAIKIGVHFFLWGSAIKFLGTKRHHDKWLSDTENYVIKGCFSMTELGHGSNVRGIETVATYDIKTREFVINTPCESAQKYWIGGAANHATHTIVFAQLHINGRNEGVHAFVAQIRDEHENVMPNIQIADCGHKIGLNGVDNGRIWFNNIRVPRENLLNLVADVLPDGQYVSTIDDPDQRFAAFLSPLTLGRVNIAVNAVYISKVGVAIAVRYALSRRAFSVTPDGPEMLLLDYPSHQRRLLPLLAKACLMSSAGNFMKRMYVKRTPELNKSIHIYSSALKATLTWQNMTTLQECREACGGQGLKTENRIGIFKAEFDVQSTFEGDNNVLMQQVSKALYAEFLTAKRKNQPFKGLGLEHLNGPCPVIPDYLTSGTLRSSSFQMDLLCLRERDLLKRFTTEVSNYLAQGENREKALMLSYQLAEDLARAFTERTILQIFLEDEKNIPTGSLKDILGLLRSLYVMVCIDESASFLRYGCLSRENVAAARKEVMTLCSELRPHALAIVSSFGIPDAFLSPLAFDWIEANARSSGNE</aaseq>

Gene Sequence

<dnaseqindica>1..503#2189..2306#2399..2506#2595..2767#2841..2940#3052..3126#4652..4782#5102..5237#5689..5808#5895..6041#6128..6232#6305..6406#6536..6784#ATGGAACCCATGTCCTCCTCGCCGGCCGCCAGCCGGCGAGCCGCAGCGATTGCCCGCCACCTCGCCGGCAATCCGGCTGCCAAATTCGCCTCCCTGCTCGAGCCATTCTCCTGCCTGGGCTACGTGCCGCCGGAGTCCAATGAGCAGCCCCCGGCGTTCGCGCTAGGCGACCTCCGGAGGCTGCTCGACGGGCACGACCTGGGCGTGCGGGACTGGATGTTCCGCGTCATGGAGCAGAGCACATTGTTCTGCAGCCGGCACGGGGGCCCCGGACCTGCAGGCAGGGTGTTCGCATCGCCGGACTTCAACAAGGACAAGGAGGGGCTGCGGGAGGCGACGATGAGGCGGATCGGGTACCTGGCGCGGCGCGGCGTATTCCGTGGATGGCTCACAGACACGGAGGGCGACGCCGAGGCCGAGCTCCGCAGGATCGCGCTCCTCGACTGCATTGGCGTCTACGATCACTCGCTCGCCATCAAGATCGGCGTCCATTTCTTCCTCTGGTGATTAATTCCCTTGCCATCTGGTGATTCCGACCTTTCTTCCGCTCGGCCCGAGCTTGCTTCATTGCTTGCGTACATAAGTTTGTCCTCTTTTACACCCCTGCTAGCTCCGAGCTTGCTTGCTTACAGTACATAATTTTGTTCTCTTTTACACTTCTTCTGGCTCCGAGCTTGCTTGCTTACTTACAGTACATAATGTTGTTTCGTTTCGCTTGGTTCTCTTGTAAAGTTTCATGCTTTCATTAGCTCTGCACTACAAAGTTATTTCAATGCTCCCGTTCTTTTTTCCTAAATCTCTTAAAATTTAGAAAATCTGTATATACCTAATTTCTTAATTGCACCAAAATATGGATTTTCTCTCCGTTCAGTTTGATACGGATATAGTTGACTCAGCATACAAAACTTTAGGTACTGTGATTCTGGGCCCTAATAGGATAATAGTATGATCCAAGCCCGTTACATGCGCTGTTTTAAATGGGCTTATAGCGAATACAATGGGATCAAATCCTGCCGTGGTCCAAGGCCCATTACACTCCAGATCGTTACTGAGTTTTCCCCCTCTCCGGCGAAATCGCACCTCACTAGGCCAAGCGACTCCACCATTTGATCCGAATGCGCTAGATCCGTTTCTGCTACTGCAAGGATTCGGCTGACTCCGGTCCGGCCTGTGGCGGATCGACCTCGCCGTCGATGTGGATCTCGGACCCCGTAGGTGCCCTCCTTCTTTCATCTCCCCGGCAGTTGTCTTCTTCTTATGGGATTCGGTTCTTCTGCAATACGCATACAGTCACGAATTTGGTTAAGTTTCTCGTTCGTTTTGTTCCTGTGTACCCACTGTCCTGTGTGTAAGACTAAAATGAATTGGGAAGAGAGAGAAAGCTCTCTTTAAAAGCATACTTGAAGTAGAGAGTTGGTAAAAGAAAAAAAGAATAGGTTTTGTCTTGCTTTGTCTTACTTTACTTCGCAGTTTTATTGAATGGTTTTCTCATTGGACTATAGCAATCGTGTTTTCTTTCTTGGCAACATATGAATGAATTGACGGTCCTCAATGGTGTTCTCTGCATGTTCCCATCAGGCCATCACAGTTGGCCCCTTTGCAACCCAAAGTCCAATCCTATACTGTACTGGAAAATTAGGTGCAGGAGTAATAGATTTTGTTGTTATCTTATCCACTTTAGCTGCTGGGTGTAATTGTTAGCCATTGCTTGCAGGAGAATGTTTTGTTCTATCTTGTTAGGATCTCCTATGAAACGAGGCTTTGCCAATTTACCCCGTACATTATACAACAGTCCTCTAGATGAAGGATTATTATCTCTATTTTGTATTTTGATACCAAGTGAGCAATGAGCTTCTCAACTCTATCTTTCCATCTTCCTCCATGCCATGTACCCTTTCTGTAAGCACTACTTGTTCTTTAAGCAATTACTGTTTATCCCATTATAAAATTAGGTTCGTATGATAGCATTTTCATATTTGTAGCATACAGTACTGGAGAGAACATCCGCCTGGAACTGGTCTTAACCCTTCATGGAAGTTATTCAATATTTTGTTGATCTCCTTCCATTTTTCATGTAGAAAGTGTAACATGTTGAATTCGAAAAATGAATGATTATTTGATAGAACTGATAGCATTATGTTTGTTGACAATTTTCTGGTATTAAACATCATTTCTTTTTGCACTCCAGGGGCAGCGCAATCAAGTTTCTTGGAACAAAGCGCCACCATGACAAATGGTTGTCGGACACAGAAAATTATGTTATCAAGGGTTGTTTTTCCATGACAGAACTGGGTCATGGGAGCAATGTATGTGATGATATTTTGGTCAATTTACTGAATTGTAGTTTTGTTAGCTGTGTTGATGAGATTTTTCTTTGCCTTATTTGACTAATTTGAAGGTCCGAGGAATTGAGACAGTGGCTACTTATGATATTAAAACAAGAGAGTTTGTGATAAATACTCCTTGTGAATCAGCCCAGAAGTACTGGATTGGTGGAGCTGCTAATGTATGATGAAATTTCACTTAAATAATTGAGTACATCTATGCTGTCTATTTGGTTATTACTTACTGTTGGTGTTTGTGGCCTTTTACAGCATGCTACACATACTATAGTCTTTGCGCAGCTCCATATAAATGGGAGAAATGAAGGAGTCCATGCTTTTGTAGCTCAGATTAGGGATGAACATGAAAATGTTATGCCTAATATCCAGATAGCTGACTGTGGCCATAAAATTGGATTAAATGGTGTTGATAATGGACGAATTTGGTGAGCCCTTGTACTTCTGTAAAGTTTTGTCTTCCTATCACGCACATTGTAAATTAATTTAACTGTCTGTCAGGTTTAACAATATACGTGTTCCTCGAGAGAATTTGCTGAATCTTGTTGCTGATGTTTTGCCGGATGGGCAATATGTTAGCACGATAGATGACCCTGATCAGGTAATGCGACCTTATCCTCTCTCTCCCTCACTCCCTAGACGTACACATAGATAAGTAGTTGCTGCATTCATTTTTGTCTCATTTTCAAACTGATAATTTTCTGTTCTGCAGAGGTTTGCAGCATTTTTATCTCCACTTACACTTGGTCGAGTTAATATTGCAGTTAATGCGGTTTATATTTCAAAGGTATGTCATGTGCCCTTCCTTTTCTATATATACATGGAGATTGTTCGAATGAGTTCCAGAGGGTATATATATATGTAGCTCAAGATTATTATAGAATTTGCTCATTTAGACTAGCTGGTAATTAAGCAAACTGGAATCAGCTAAGATAAACAGCACAAGCAAAGTGAAGTATCATCTATTTGAACAAGGACAGACCACATCTGTGCACTTAGTTAGATCAGCCCAAACAAGTTTGGTTGGAAGTACCTTTACAGCCAAGAACATTTCTCGAAACCTGGAAATTATAATTCAGAGATTTATTTGGAATTTGACTGTTCATGAACTGAAATAACTAAGCCAAGATGGAGTATAGAGAAATCTTTTTAAAATGGTTGAGTTTAGATCAATCAGTGCCAGTGATAAAGTAAGAATCCAGTTCCTAACACGCAGAGGAATGTGCTTTTCAATCAAATTTTTGTTCCTAGATACGTTACAATAAGAGGTTTTTTTTTCGAACATGCAGGAGATCTGTGCATCATTTCATTAATAATAAGAAGATAAACACAGGGAGGGGATCAAAAATCTCCCCACCCTAAACACTTAAAAACAGAAAAACAAGATCACTTAAGTCGCAAGGGCCATCGACCTACCCAATATCTCACGAAACTTTAAAGCTCTGGCTAAGCACCAGAATGTGCCTTCATCTGCTACTGATTGTAGCACCATTGACACCCTCGGAATTGAGCCATTGAAAACACAATCATTCCCGTGTTTCCAAATTTCCCTAGCCACCAGAATTATAAGCGAGTTTAGCCCTTTCTTCCTTTCTTTGTTGATGTCCTTCACTGCCCTAGACCACCAGCTTGAGAAATGACATGTGTCAGGGGTAGGGGTGAGGCCAGTGAAGCATGAAGCTACTCTGTGAAGGATCAGCGACCAAACCTGCCAGCTAAAAACGCAAGTGATAAGAATATGTTGCAAAGGGCAGGCAACTAGGTGTGGGAACCCTCGCTTGGACAGGCGATCAGCCATCCAACAATGGTTATTTACCACAAACCATAGAAAATATTTGCACTTTAGCGGTGCCCAACATTTCCATACCCTTCTCCATGGAGCAAATCTGATAGTCCCAACAAAAAGAGTCTCATATGCTGATTTGCTAGAGTACCAGATCCCGATAACCTCCAACGGTGCTGATTCGGTGTATCATGTTGCAAGTTTACTGCAAGCACTAAATCCCAGATCAGAAGATACTCTCTAATCACTTTCACAGTGAGAGCTCCTTTTATATCTGTGATCCATGTTTGATTACCCAATGCTTGAGCCACTGTACATTGTTTGACAACCTTCTTAGCAATTAGCTTGAACAAATTAGGGGTACAAAGAGATACCACATTTTCTATTGTAAAATTTAATACCTGCTGGTACACGAGACACTGAGAAGTACAAATTTTATAGTAGAAAATGTGGTACTCCCGGTACCTCCTCAAGGACCTTAAAACTTCTAAAATAAATAAGCTTGTGTGCTCTTTCTCTGTGCTTACAGGTTGGCGTTGCAATTGCTGTGAGATATGCTTTGTCAAGGAGAGCCTTTTCAGTTACACCAGATGGTCCTGAAATGCTGTTACTTGATTATCCCAGTCACCAGCGACGCCTTCTACCACTGCTAGCAAAAGCGTAACCTACTAGCTTTCTCTGGATTTTTGTACTTTGCATGTATTTAATTTTGAAGCTTCTTCCACAGCTTGGAGTTTTTGCAGTAGCTCATTCGTTTTTTTTCCTCTTGCTAATCTATCATCTTGCTGAACATTTGGCATGGGAGTAGATCTGATATTCTAGTCATGAAATGCCAGTATCCTTATAAAAAAATATTAGCACTAAAGTTGCTAATATTCCCAACATGTAAAAAAACATCACTAATGCTAAGCCCTTTTTTTCAGTGTTTTCACTACTACTTAATGTCATCATATATGCTAAAGTATATTTCCTTATGCAGATGTCTGATGAGCAGTGCTGGTAATTTTATGAAAAGGATGTATGTGAAGAGGACTCCTGAACTTAACAAATCTATACACATTTACTCTAGTGCTCTTAAAGCTACACTTACCTGGCAGAATATGACCACACTTCAGGTATTGTCAAAAAGCGCCACCAAGTATTTTTTCTTTAGAGATCTATTTAGTTAGGAATGTTGATACATTCGGATGGACAGGGATTCTAGTAGAATTTTCTTGCTTATTGTGATAGAGTCTACTCCCTCCGTTCCAAAATATAAGCATTTTTAGAATAGTGCCAAGTCAAACTTTTTAAATTTTGACTATTAATAGCAAAAAATTAGAAAAGATTAATCATGTAAATTTGATGTTACTATGTTTATCATTAAATGAACTATCATAATATGCAACTCTTTTTATTTAAGATATTTTACTTTTGTAGATATTGTTAGTTAAAGTAGCATCTCGGAGACCGTGTCCAGGTCCAAAAATGCTTATATTTTGGGACGGAGGGAGTATATCTTATTATTCCAAACAAGCCCTTTTCTTGATCGATATCACATTCTGGATTTCTTTTTACATCTATTAGGAGTGCCGTGAAGCTTGTGGTGGCCAAGGTTTGAAGACAGAGAATCGCATAGGAATTTTCAAAGCTGAATTTGATGTCCAGTCTACATTTGAGGGCGACAATAATGTTCTAATGCAGCAGGTTATTTTGCTTATTGTTTGTCATCTATGTATTTCTCCCAAAGGTATTTTATGCTTAGATTAATTTTAACTATTTAACCTTTTCAGGTAAGCAAAGCCCTTTATGCTGAATTTTTGACAGCAAAAAGGAAGAATCAACCATTCAAGGGATTGGGCTTGGAACACTTGAATGGTCCTTGCCCTGTTATTCCTGATTATCTGACAAGTGGCACACTAAGAAGCTCCAGTTTCCAGGTATAGAATAATAACTTAGTTTCTTACATTTATAAGATAGCTGTCATGAGACAACTCTTTATGTATGCCTTTGTGTTGGTGAATAGATGGACTTGCTCTGCTTGAGGGAGCGAGATTTACTGAAACGATTCACCACGGAGGTTTCTAATTATCTGGCACAAGGAGAAAACAGAGAGAAGGCTTTGATGCTGGTAAATCTGCTTTTACTGCACATTTTCTTGGCGAGCTTAACTTAGTGTCTAACTTGTGTGACATTTATCCAGAGCTACCAACTCGCTGAAGACTTAGCTAGAGCATTTACTGAGCGCACAATTTTGCAAATATTTTTGGAGGATGAGAAGAATATTCCTACTGGTTCTTTAAAGGTATATGTATTCTCCTCTTGCTACCTAGCTCAAGTCCTTCCTGAATCCCTTCGATTGTTGTATTGTTATTATTATGTGAATTTTCATGCAGAAGTAATCTTCATGTAACCTTGAATTTGCGTTCTGCAGGATATATTGGGCTTACTAAGGTCTTTATATGTTATGGTTTGCATAGACGAATCTGCATCCTTTTTGAGATATGGTTGCCTATCGCGAGAGAATGTAGCCGCTGCTAGGAAAGAAGTGATGACACTGTGCAGTGAACTCAGGCCCCACGCACTTGCTATTGTCAGTTCCTTCGGAATCCCAGATGCCTTCCTTAGCCCACTCGCTTTTGACTGGATTGAGGCAAATGCACGGTCTTCTGGGAATGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021280

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021280&oldid=43805"