BGIOSGA021293

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Revision as of 12:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021293| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021293, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA021293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021293, complete gene.

LocusTag

OSJNBA0021N09.1

Ensembl Transcript ID

BGIOSGA021293-TA

Ensembl Protein ID

BGIOSGA021293-PA

Length

2729

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:14616938..14619666

Sequence Coding Region

14619568..14619666,14618017..14618248,14616938..14617743

Genome Context

<gbrowseImage1> name=IndicaChromosome06:14616938..14619666 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:14616938..14619666 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCCTAGTGGCGGCGTCCAGCGACGGGACCTGGAGACGGCGCTGGCGCAAAATGAGAGCACAAGTGTCGCCTCCCCTTCCCGATCCCCTTCTGCGGGTGGTTCATTCAGAGCATGCTACTGGAGGACACAAATAGACCTGCTTCTTATTAATGTTGCAAGAGAGTCTTTCTGTACTATGGGGATGTATGAACTAAGACCACTATTGGCAGGAGATCCAACTTTTTCAGACTTCCAGTTAGCCTTGTTAAAATCTCTATTGGCATCCTTTCTTTCTTCTCCTGACAATTGTCCTTATTTAGAACGAGGTCTTGAGCTCTTCAACAAAGGGAGGCTAGAGACTGGTACCGAGCTTGCAAAATTTTGTTCACATGCTTTGCTGGCTTTGGATGTCCTTGTACACCCTCGTGAACATTGTCTACAATATGATCCAAAGATTCCTCTCAGAAGAGCAGCTCATGGTGATCAAGGATCCCTGTCGATTGCTTCAGACAATGAAGTATTAGATTCCGGGAGATGTAAGAACCTCCACTCTGCATGTAAAAACCAAGCTACCGAGAATTCAGGAGATGAAGTCAATGAATGGCTATTCTCTACTGACGATGCTCCAATTGATGCTTTTGTGGAAGACAATACTGCGGAGAACCATGAAGTGAAGGAGATGTCCAGAGATCATTTGGTGCAGAAGGACACTGTCATCGGAGAACATCAAGAAATTGTTTTAAATAAGTTTCATGGGGAATTGCTGGTTCCAACGTCCAGTAGAACTGATGCCGATGTGGCTATTGCAGGAACAAAAGGAGGAACATACAACAGCCCTGCTGATTACATGGTGGGTTATCCTACTCACTTTTTCAATGTTGATTCAGCTCGCATCAGCATAACACCACCTGATACTCAGGATCTTGGGGGTGCTACATTTTCAAACAATAAAGACGACCAGCATGGAAGGACCATTTCAGGTGCTGCTTCAAGTAGCCAGAATGTGGCAAGGCACACCGCACCGATTTGTGATGCTTCAGGCGTGTCTGGTACTGAGTGGGACTCACTTGACCCATTCCTGGATATAGGTAATTTTGGCACTGAGACAACTTTTTCCTTGGACATGGCTAATCTTGATCCAGGCTCCAATTAG</cdnaseq>

Protein Sequence

<aaseq>MGPSGGVQRRDLETALAQNESTSVASPSRSPSAGGSFRACYWRTQIDLLLINVARESFCTMGMYELRPLLAGDPTFSDFQLALLKSLLASFLSSPDNCPYLERGLELFNKGRLETGTELAKFCSHALLALDVLVHPREHCLQYDPKIPLRRAAHGDQGSLSIASDNEVLDSGRCKNLHSACKNQATENSGDEVNEWLFSTDDAPIDAFVEDNTAENHEVKEMSRDHLVQKDTVIGEHQEIVLNKFHGELLVPTSSRTDADVAIAGTKGGTYNSPADYMVGYPTHFFNVDSARISITPPDTQDLGGATFSNNKDDQHGRTISGAASSSQNVARHTAPICDASGVSGTEWDSLDPFLDIGNFGTETTFSLDMANLDPGSN</aaseq>

Gene Sequence

<dnaseqindica>1..99#1419..1650#1924..2729#ATGGGTCCTAGTGGCGGCGTCCAGCGACGGGACCTGGAGACGGCGCTGGCGCAAAATGAGAGCACAAGTGTCGCCTCCCCTTCCCGATCCCCTTCTGCGGTAAAACCTCTCTCTCTCTCTTACCTGATAGGTGGGGCCAGGGGTAAAACAGTCTGAAAAAGGAGGATAAAACAGAAAAAGAGAGAAAATGAGAAAATGATGAGAAAGAGAGAGTGGTATGAAATAAAAAAAAATTAGCACTCCTAATGGTGCGTTAGAAAAGGCATGCGGATTGGATGGCAAGTTTGCAAAGGTATGCGTATTTAGTGGCTTATTATCAAATTTCTCGGAACATTCAAAGAGGTCATGAAGTCTTCAAAGTGGACATTCCTGCATCAGCGTCTACTGATCTGCTGTAGGTAGTGAGTTCCCACGGTGACTTGGTCGCCAACATTGTCATGCTTCTGGACACCCTCAGCAGGTGTTCGACCATGGTGATGAGGCCACATATGCTCTCGCCTGCGTCGTCTATTGACTCATTGCAATTGACCTCACTATGGACTTAGAGGGGATTCAAGTGGAGATGTGGGGGGTTGAGGAGGAAATGATCTAGCGGTGTTGACCAGCATGTGATGTGGCTCTCTGAAACATTATTTCTAGTCCATAACTTCTATTTGTTGGTTTTGGGTGGTTGTGGTCAGTGATTGCAATTTCAGTAATTTTGGACCCCCTCCCCTCTTGGGCAAGTGATTATCTCGGCCGAATTTTTCTGTTTTTCTCAAACTTATGCAAATTTGGTCATAATTTAGTCATTCAGTAAATTTATGTTAAAATTTCAAAAAAAAAATCGGTCCAAAAAAACCAAATTTTCAGGAATTTCGATAGAACCGAAATGGCTGAATTTCGGCCTAAATCGAAATTGAAAACCATGGTTGCGGTGGTGTTTTGTTTGCGCTTGTACGTATTGTAACTTCCTTTAGTGTATATTTTCTTATGTAAAGTTGCCCTTTGTATATCCATCCTTTTGTCTTCATTTGCAAGACAAGTTCTTTTGTTCATATCTATTTCATGTGCAATTCTAGCATTTTGTTTTTTGAACGGTGACTATTTGAACTGGTATTACTATTTTACTTTCACGGTGGCATTCCTTATAAGAACGGTTTAACTGTTGGTCATTAATACAAACAGAATACTGTAGAGTACCATTATCTTCTTAATCCACTCATCATTTCGTATCTCTACTCAATTGGCTAGGTTGCCTCCAAGGTGTTATTTATTGTGCCACTCTTACTTTTAGGATGTATAGACATGTGTCCCAAAAAGACTTCGTTTGTCCAGATTCATAGCTAGAAACGAAGTCTTTTTGGGATGGGGGACTAGTAGTAGATAATCTTGCGTATATTCTGTTGAAATTGGCTATTGACTCTCAACATGAGCAGGGTGGTTCATTCAGAGCATGCTACTGGAGGACACAAATAGACCTGCTTCTTATTAATGTTGCAAGAGAGTCTTTCTGTACTATGGGGATGTATGAACTAAGACCACTATTGGCAGGAGATCCAACTTTTTCAGACTTCCAGTTAGCCTTGTTAAAATCTCTATTGGCATCCTTTCTTTCTTCTCCTGACAATTGTCCTTATTTAGAACGAGGTCTTGAGCTCTTCAACAAAGGTAATACCTTCTTCCAGTTTCTGAGCCAATCTGTATTTGCTGTATTTATCATCTATTTCCACATGCATTCCAGTTTTGCTAATTCATTGGTAAAACGTAGAGTTAACGATATACAGAAGAAACCCACTAGGACACATACGCATGAAATTTGTTAAGCTAGCTAAATAAATCATGCATTTCATATAGCAGTTCATTTACTTAATTACATCCATGTAATTCTCAAAACGTGTTAATTTTGTTTGTTGTAGTATTTATCTTTTCTTGTCATAACAGGGAGGCTAGAGACTGGTACCGAGCTTGCAAAATTTTGTTCACATGCTTTGCTGGCTTTGGATGTCCTTGTACACCCTCGTGAACATTGTCTACAATATGATCCAAAGATTCCTCTCAGAAGAGCAGCTCATGGTGATCAAGGATCCCTGTCGATTGCTTCAGACAATGAAGTATTAGATTCCGGGAGATGTAAGAACCTCCACTCTGCATGTAAAAACCAAGCTACCGAGAATTCAGGAGATGAAGTCAATGAATGGCTATTCTCTACTGACGATGCTCCAATTGATGCTTTTGTGGAAGACAATACTGCGGAGAACCATGAAGTGAAGGAGATGTCCAGAGATCATTTGGTGCAGAAGGACACTGTCATCGGAGAACATCAAGAAATTGTTTTAAATAAGTTTCATGGGGAATTGCTGGTTCCAACGTCCAGTAGAACTGATGCCGATGTGGCTATTGCAGGAACAAAAGGAGGAACATACAACAGCCCTGCTGATTACATGGTGGGTTATCCTACTCACTTTTTCAATGTTGATTCAGCTCGCATCAGCATAACACCACCTGATACTCAGGATCTTGGGGGTGCTACATTTTCAAACAATAAAGACGACCAGCATGGAAGGACCATTTCAGGTGCTGCTTCAAGTAGCCAGAATGTGGCAAGGCACACCGCACCGATTTGTGATGCTTCAGGCGTGTCTGGTACTGAGTGGGACTCACTTGACCCATTCCTGGATATAGGTAATTTTGGCACTGAGACAACTTTTTCCTTGGACATGGCTAATCTTGATCCAGGCTCCAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021293