BGIOSGA021300

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Revision as of 12:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021300| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021300, complete gene.| tag = P0459H0...")
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Gene Name

BGIOSGA021300

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021300, complete gene.

LocusTag

P0459H02.4

Ensembl Transcript ID

BGIOSGA021300-TA

Ensembl Protein ID

BGIOSGA021300-PA

Length

3815

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:14461981..14465795

Sequence Coding Region

14465535..14465795,14463142..14465430,14462166..14462377,14461981..14462053

Genome Context

<gbrowseImage1> name=IndicaChromosome06:14461981..14465795 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:14461981..14465795 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCTCTGCCTCCTCCCCGTACGTCGCGCCCCTCATCTCCTCCCGGATCACCGGTCGCCTCCGCCCCGCCTCGGCGCGGACGGATCCCCTCGGCCTAGCCGCCGCCGCCGCCGCTGTCAGAGTCCGTTCCTGGAGGCGCTTCGCGGGTGCCCGCTGCGAAGTCGCGCTCCTCCCGGCCCGGAGGATCAGCGCGCAGCCCCGTCGCCGGAACGCCCTGCGCGAGAAGGCATCGCCGCCGCCGCCAGCCGATCCGCAGGTACTAGAAGAATCTGGTTCTTTGGATGTGCAGCGGCTGCCGGATCTTGATCGCGAGCCGGGAATTTCTGGTGGTCTGGATGCCGTTACAAGTGGAAATATTGTTTCGAAATGGAACTTGGAAGGTGGGAGTGATGTGGTTGGACTTGGAGTTGCACAGACTGGTCCTGGAATCGTTGGCAGGGGTGGCAATACAGAGGTACAAGGGCGCGGTGGCAATGTGGAGGAGGTTATGATCTCTCGTGCAGGAGCAATGGCTAATCAATTTGGAAGTGGTGAATGTGAGGTTCCAACGCTTAGCTCATCATTTCCGTTTCTCACAGTTGAGGCGAAGGAACCGCTGGTTGTAGATGCTCAGTTTTTGGCTGTGCAAATAGACAAGCCTCGTTTGAGGAGCATTGCATGGAGCGGTTTTGCTGCGCTGTGTGCTGCTTGTGTTTTGCTTGCGGTGTCCAAGTTGATTTGGGGAAATGGTAAGAAATACCTGTCAAGGAACATGTTTGACATTCTTAGGCCTCGGATGAACAAGGGTGAATCGGGCAAAGGTGGAATCAAGGTTCTCAAGAATGTAAAATGTCCAGAAGATTTATTGGGAAGACCACAATTAGACAGGCACAAATTGATGAATAACATCAAAAGAGCCAAGCAATCTAGAGAATTGTTTGACCTCAGTAGTGTATTTGGTTACTGTAGTGTTGCTACTTGTTATGATGTAATTATAACAGAGACCAGAAGAATGGTAACAAATGTTCACACGTTACTTGAAGGAATCCTTGAACAAAGCAAAACAAAGAGCAAACATTCTGTGTTGTTTCCACACCCTGCTGCTACCAATGGCCAAGAGGTTTCTGCAAGTCATGGTCAGTGTTCTGTATATCTCAATGATGTCTTAGGCTGTGCTGAATTACCTGATATCAGTATATCCAATAATATTATTGGGGAAACTGTGGAGTCGTCTGTGGATTTCAAAAGCAGTGCACAAGTCATGGACAATAGTGTAAAAAATCAGAATAATGTTGGAGATATTGAACCACCTGTGGACACACCTACTAATGATATGCCGACTGATGCAAAGGATAGTATACCCATGGTGCACGTGGTTGAAATAGAAGAACAGATTGGTTCTCCAGATGAATGTATTGACGGTCTTAATAGTATCAGCATCCCATCATCTGAATTTGAAGGACAAAAACAATTTCCAGACATAAGTGTGAAGAATGTGGATGGCATTTTTGGAATAAAATCATCACAGATCAGTAGTGATACAGATGTGATTGGTACAAATGATAATTCACACAAGTTTAGCATTAATGTTGCCTCAAAAACAACTGGTGATTTGTCATCTGGCTGTTCCAACAGCATACCATCTGAATCAGAAAGTAAGGAAATACCCGTGGATATTAATCGGAATGATCTCAATTACTTTCAAGAAATTGAAGCACAAAGTACCTTTGCAAATTATGATGCTCAGACAGTTCAGTACGAAGAAATTTCTCATAGAGTAAGCATGATAACTAAAGAAGCTTGTATAAATCCAGCAATGGCTGATATTTTGATTACAAAATCACCTCAGAGAATCGGTGAGGAGCCTGTGGATCTGATGAGAGGTAATGCACAATCCATGCAAGAACTAGAACCATCCAGCTCTATTAGGGATCACAAACAGATAGTTCTTGCAAATCAGAAAAACAACATAATAAGTAGAAGTCACAATGAAACACAGGCTAGTTCAGAAATAGACATTATTGGGACAAATGATAATGCTAGCACATCTTCAGTTTATGACCTGCCGGAAGAATCAATACACCAAAGTGCAAAAAATTCAACAGAGAACACATCTTATAACGAAGAGCCTGAAGAATCTATTATTAAAAGGAAAATCAAATTACATCAAGAAATGTGCAACGATAAGGATGCTCAAACAAAGCACAAAGTAGAAGGTGTATCTGAAATTGGCCCTGAGTTTGGTCCATCAAATGATGTATGTAAAACTGAAACAGTGGCAAAGAAACGGTCAAAGAAAACGCCATGTGATAAGGGACTTAAAGTGCCAGAACAGGATATAGTTCAATGTAACAGCATGGCTGATAAGAAAAGCAGTAGCAAGAATGTCAAAAGGACAAGGAAAAATCTGAAAAGTGCACTTCGCAACCAAGGAACTCAAACGACACAAGAAATTTCTGAAACAGCACTCGTGGTAAATTCGCCTGATGATGCACCCAGAGCTGAAAACATAAGACCTTTTGGTGGGTCAGGTTCATTGACAGAAACACAATCTCCAATGTTTTCAGATACATTCAGTGAAGCTCGGCCTAATGGCTTCAGTATTAGTACGATGAGGAAGGAAAAATCAAAACACAATTTCCAACCTCTGGAAAGTGTAGAGGCAGCAGCAGTAAAATTTAAAACCAATAGGCATGGTGACAATATCATGAACGAGAGAGCAATTGATTTCGACATATCAAATTTGGGTGTAACCACCACCAAGAAAATGACAAAGAGAAGGTCATTGTCAAAGCGTAAAAAGCCTGCTAATGGACTCGGAGGAGCCACTGACGTGCCACCAGATGTATAA</cdnaseq>

Protein Sequence

<aaseq>MAGSASSPYVAPLISSRITGRLRPASARTDPLGLAAAAAAVRVRSWRRFAGARCEVALLPARRISAQPRRRNALREKASPPPPADPQVLEESGSLDVQRLPDLDREPGISGGLDAVTSGNIVSKWNLEGGSDVVGLGVAQTGPGIVGRGGNTEVQGRGGNVEEVMISRAGAMANQFGSGECEVPTLSSSFPFLTVEAKEPLVVDAQFLAVQIDKPRLRSIAWSGFAALCAACVLLAVSKLIWGNGKKYLSRNMFDILRPRMNKGESGKGGIKVLKNVKCPEDLLGRPQLDRHKLMNNIKRAKQSRELFDLSSVFGYCSVATCYDVIITETRRMVTNVHTLLEGILEQSKTKSKHSVLFPHPAATNGQEVSASHGQCSVYLNDVLGCAELPDISISNNIIGETVESSVDFKSSAQVMDNSVKNQNNVGDIEPPVDTPTNDMPTDAKDSIPMVHVVEIEEQIGSPDECIDGLNSISIPSSEFEGQKQFPDISVKNVDGIFGIKSSQISSDTDVIGTNDNSHKFSINVASKTTGDLSSGCSNSIPSESESKEIPVDINRNDLNYFQEIEAQSTFANYDAQTVQYEEISHRVSMITKEACINPAMADILITKSPQRIGEEPVDLMRGNAQSMQELEPSSSIRDHKQIVLANQKNNIISRSHNETQASSEIDIIGTNDNASTSSVYDLPEESIHQSAKNSTENTSYNEEPEESIIKRKIKLHQEMCNDKDAQTKHKVEGVSEIGPEFGPSNDVCKTETVAKKRSKKTPCDKGLKVPEQDIVQCNSMADKKSSSKNVKRTRKNLKSALRNQGTQTTQEISETALVVNSPDDAPRAENIRPFGGSGSLTETQSPMFSDTFSEARPNGFSISTMRKEKSKHNFQPLESVEAAAVKFKTNRHGDNIMNERAIDFDISNLGVTTTKKMTKRRSLSKRKKPANGLGGATDVPPDV</aaseq>

Gene Sequence

<dnaseqindica>1..261#366..2654#3419..3630#3743..3815#ATGGCCGGCTCTGCCTCCTCCCCGTACGTCGCGCCCCTCATCTCCTCCCGGATCACCGGTCGCCTCCGCCCCGCCTCGGCGCGGACGGATCCCCTCGGCCTAGCCGCCGCCGCCGCCGCTGTCAGAGTCCGTTCCTGGAGGCGCTTCGCGGGTGCCCGCTGCGAAGTCGCGCTCCTCCCGGCCCGGAGGATCAGCGCGCAGCCCCGTCGCCGGAACGCCCTGCGCGAGAAGGCATCGCCGCCGCCGCCAGCCGATCCGCAGGTGCGTGCTCAGTATGACGGTTCCCCGGAAACCGGGGTCGCGATACGACAAATAATCCTTCTTTTCTTGGTTGCATTGTAAAAAACATTCTTCTTGGTTGCCAGGTACTAGAAGAATCTGGTTCTTTGGATGTGCAGCGGCTGCCGGATCTTGATCGCGAGCCGGGAATTTCTGGTGGTCTGGATGCCGTTACAAGTGGAAATATTGTTTCGAAATGGAACTTGGAAGGTGGGAGTGATGTGGTTGGACTTGGAGTTGCACAGACTGGTCCTGGAATCGTTGGCAGGGGTGGCAATACAGAGGTACAAGGGCGCGGTGGCAATGTGGAGGAGGTTATGATCTCTCGTGCAGGAGCAATGGCTAATCAATTTGGAAGTGGTGAATGTGAGGTTCCAACGCTTAGCTCATCATTTCCGTTTCTCACAGTTGAGGCGAAGGAACCGCTGGTTGTAGATGCTCAGTTTTTGGCTGTGCAAATAGACAAGCCTCGTTTGAGGAGCATTGCATGGAGCGGTTTTGCTGCGCTGTGTGCTGCTTGTGTTTTGCTTGCGGTGTCCAAGTTGATTTGGGGAAATGGTAAGAAATACCTGTCAAGGAACATGTTTGACATTCTTAGGCCTCGGATGAACAAGGGTGAATCGGGCAAAGGTGGAATCAAGGTTCTCAAGAATGTAAAATGTCCAGAAGATTTATTGGGAAGACCACAATTAGACAGGCACAAATTGATGAATAACATCAAAAGAGCCAAGCAATCTAGAGAATTGTTTGACCTCAGTAGTGTATTTGGTTACTGTAGTGTTGCTACTTGTTATGATGTAATTATAACAGAGACCAGAAGAATGGTAACAAATGTTCACACGTTACTTGAAGGAATCCTTGAACAAAGCAAAACAAAGAGCAAACATTCTGTGTTGTTTCCACACCCTGCTGCTACCAATGGCCAAGAGGTTTCTGCAAGTCATGGTCAGTGTTCTGTATATCTCAATGATGTCTTAGGCTGTGCTGAATTACCTGATATCAGTATATCCAATAATATTATTGGGGAAACTGTGGAGTCGTCTGTGGATTTCAAAAGCAGTGCACAAGTCATGGACAATAGTGTAAAAAATCAGAATAATGTTGGAGATATTGAACCACCTGTGGACACACCTACTAATGATATGCCGACTGATGCAAAGGATAGTATACCCATGGTGCACGTGGTTGAAATAGAAGAACAGATTGGTTCTCCAGATGAATGTATTGACGGTCTTAATAGTATCAGCATCCCATCATCTGAATTTGAAGGACAAAAACAATTTCCAGACATAAGTGTGAAGAATGTGGATGGCATTTTTGGAATAAAATCATCACAGATCAGTAGTGATACAGATGTGATTGGTACAAATGATAATTCACACAAGTTTAGCATTAATGTTGCCTCAAAAACAACTGGTGATTTGTCATCTGGCTGTTCCAACAGCATACCATCTGAATCAGAAAGTAAGGAAATACCCGTGGATATTAATCGGAATGATCTCAATTACTTTCAAGAAATTGAAGCACAAAGTACCTTTGCAAATTATGATGCTCAGACAGTTCAGTACGAAGAAATTTCTCATAGAGTAAGCATGATAACTAAAGAAGCTTGTATAAATCCAGCAATGGCTGATATTTTGATTACAAAATCACCTCAGAGAATCGGTGAGGAGCCTGTGGATCTGATGAGAGGTAATGCACAATCCATGCAAGAACTAGAACCATCCAGCTCTATTAGGGATCACAAACAGATAGTTCTTGCAAATCAGAAAAACAACATAATAAGTAGAAGTCACAATGAAACACAGGCTAGTTCAGAAATAGACATTATTGGGACAAATGATAATGCTAGCACATCTTCAGTTTATGACCTGCCGGAAGAATCAATACACCAAAGTGCAAAAAATTCAACAGAGAACACATCTTATAACGAAGAGCCTGAAGAATCTATTATTAAAAGGAAAATCAAATTACATCAAGAAATGTGCAACGATAAGGATGCTCAAACAAAGCACAAAGTAGAAGGTGTATCTGAAATTGGCCCTGAGTTTGGTCCATCAAATGATGTATGTAAAACTGAAACAGTGGCAAAGAAACGGTCAAAGAAAACGCCATGTGATAAGGGACTTAAAGTGCCAGAACAGGATATAGTTCAATGTAACAGCATGGCTGATAAGAAAAGCAGTAGCAAGAATGTCAAAAGGACAAGGAAAAATCTGAAAAGTGCACTTCGCAACCAAGGAACTCAAACGACACAAGAAATTTCTGAAACAGCACTCGTGGTAAATTCGCCTGATGATGCACCCAGAGCTGAAAACATAAGACCTTTTGGTGGGTCAGGTTCATTGACAGAAACACAATCTCCAATGTTTTCAGTAAGTTCCCTCCTGTTATGGTTTTTTTACTTAGATCTATGGAAATTTATTGTATTTGTAATGGATGATTATTATGTTTATTGCCTAGAACATATTATGTTCTTATAGGGCATTCTTGTGATGCCCCATCCAGCATATTGATATTCATTTTTTTGTATTGATGACTTGAAGTCTTTACATCTGGTTTGATTTGATTTCAGCCCTTCTACTATAGGATTTTGTTCAATTAAACACCTTTGTTTTTGCATCTAGATATTAGCTAATTTTACCTTTAACTGATATATCTTTGTTATGTGATGACTTAATATGAGGCTACAATGACTGTCAATTGTAATGATATTAACTATTATGTTGATCAATTGCCCTTGTCTAGGAAAAATGCTATGAAATAAACTGTCAAAAAATATATACATATAAAGAAACTAATATGTGATATGACTTGCCCTGATCCTTGCCTGTACATAAGTTATTTGAGAATCTGCAATAATAACTTGATCATGCATTCTAATGGAACTAATTGTCATATTGTTCAATATATTTTACACAAGACATGCATGATGTTTCCCATAAGTGCACTCATATCTTCTTCACTGTCATACAAGGCCTAGAATGGATTGAAGACTTCAAATTTACAAGTTCTTTTGTATTTGTATCGCTGTCTCTTTAAATTGGAAGTTTTTCATATGAAGTAATAGGTCAAATTCTTTCCTGTTTTATCCGTTGTCCTGTGTTTCTCATTAGTTATGTCCACCGCTCTATTGCAGGATACATTCAGTGAAGCTCGGCCTAATGGCTTCAGTATTAGTACGATGAGGAAGGAAAAATCAAAACACAATTTCCAACCTCTGGAAAGTGTAGAGGCAGCAGCAGTAAAATTTAAAACCAATAGGCATGGTGACAATATCATGAACGAGAGAGCAATTGATTTCGACATATCAAATTTGGGTGTAACCACCACCAAGAAAATGACAAAGAGGTAACTTTCCTGAAAGGAATTTCATTTTTCAAGTCAAAGACCACATATAGTAACAATTTAAATGGTATATTACTTGTTTGAATCGGTCATTGCACTTTCTTTTTCTTTACAGAAGGTCATTGTCAAAGCGTAAAAAGCCTGCTAATGGACTCGGAGGAGCCACTGACGTGCCACCAGATGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021300