BGIOSGA021316

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Revision as of 13:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021316| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021316, complete gene.| tag = OsI_228...")
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Gene Name

BGIOSGA021316

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021316, complete gene.

LocusTag

OsI_22807

Ensembl Transcript ID

BGIOSGA021316-TA

Ensembl Protein ID

BGIOSGA021316-PA

Length

5428

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13972361..13977788

Sequence Coding Region

13977595..13977788,13976774..13976857,13975997..13976087,13974483..13974839,13974174..13974265
,13973459..13973562,13972361..13972719

Genome Context

<gbrowseImage1> name=IndicaChromosome06:13972361..13977788 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:13972361..13977788 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGAAGCAGATGCAACAGCAGCCGCAGCAGCCGGAGTCAGAGCCAGAGCCAGCGGCGCCCGCGCCTGCAGCAGCAGCAGCGGAGGCGAAGGCGACACCGCCGCAGCCGCAGCCGCAGCAGAAACCGGCGGCCCCAGTGCAGCCTCAGATGCCCACGCCGAGGCCGTGGCCAGTGGCCTTCATCCCTCCGAAGCCGGTGGCTGAAATTAAGAGTACTCCTTCAACAAAGAGAAAGAAACATTGTAATTGCAAAAATTCACAATGTCTAAAGCTGCAGGAGGCCATTACAGTACGAAGCAACGGAATCCAAAAGCCTTCCAAGCTGAAGATTGAAAATGGTTCAAATGCACTTAATCTTAGAAAGGATGATGCTGGAGCACCAGCCTCACTTCCAAAGCATAATAAAGGTTGCCATTGCAAGAAGTCAGGATGTCTCAAGAAGTACTGTGAATGCTTTCAAGCAAATATCCTTTGCTCCAAGAATTGTAAATGCCAGGATTGCAAGAATTTTGAAGGAAGCGAGGAGCTACGGCTTATAACTCAAGGGGACAACTCATCAGATCGAAATAACATTCAACATGCTGCCAATGTTGCTTTGAATGGTGCAATTGGATCCTCAGGGTATAGATATTCTCCAGTGCGTAGGAAAAGGCCTCCAGAAGATCATCTTTATCAGAAACTAAATGGTGAAGGAAGCACGATGCAAACACAGTTTCAAGAGGCTAACCATGTGGACTCTTCAGAAATTACTTCTTCGACTGGACTCGAAGGGTGTTATAGTAACTACCAGTGTAGATCTAACGTGGTCTATAGGTCTGCGTTAGCAAACACTATCAGCCCTACGGATGCTACTGGTCTAGCCAAGCATTTGGTGATTGTATGCAGAAAGGCAGCAGACGCATTCCTGACGACAGCTGAAAACAAAGGGGAGATGGAAGTAGAAAGGGAAATCCACACAGATTCTCATGGTGCAACCAATATGGATCAGCAAAATGGAGGTGATTTTGGTCCTTGCTGTAACAGCCTAGAGGATTCTAGGCCAGCCTCTCCAGGAACACAAGCATTGATGTGTGATGAGCAAGGTAGTACATTTGGAACGGATTATAGAATTTCATTTCCAGTGGCATTGCATGATCAAGACACTTCAGAACTAAATGCTCAGCAAGAAAAAGCAGTGTTGACAGGGTTTCGAGACTACCTCCGGACAGTCATCACACGTGGAAAAATAAATGGTACGGAATTTGCTAAGATATTTCTATCCCTTAAACGATGTTGA</cdnaseq>

Protein Sequence

<aaseq>MEKKQMQQQPQQPESEPEPAAPAPAAAAAEAKATPPQPQPQQKPAAPVQPQMPTPRPWPVAFIPPKPVAEIKSTPSTKRKKHCNCKNSQCLKLQEAITVRSNGIQKPSKLKIENGSNALNLRKDDAGAPASLPKHNKGCHCKKSGCLKKYCECFQANILCSKNCKCQDCKNFEGSEELRLITQGDNSSDRNNIQHAANVALNGAIGSSGYRYSPVRRKRPPEDHLYQKLNGEGSTMQTQFQEANHVDSSEITSSTGLEGCYSNYQCRSNVVYRSALANTISPTDATGLAKHLVIVCRKAADAFLTTAENKGEMEVEREIHTDSHGATNMDQQNGGDFGPCCNSLEDSRPASPGTQALMCDEQGSTFGTDYRISFPVALHDQDTSELNAQQEKAVLTGFRDYLRTVITRGKINGTEFAKIFLSLKRC</aaseq>

Gene Sequence

<dnaseqindica>1..194#932..1015#1702..1792#2950..3306#3524..3615#4227..4330#5070..5428#ATGGAGAAGAAGCAGATGCAACAGCAGCCGCAGCAGCCGGAGTCAGAGCCAGAGCCAGCGGCGCCCGCGCCTGCAGCAGCAGCAGCGGAGGCGAAGGCGACACCGCCGCAGCCGCAGCCGCAGCAGAAACCGGCGGCCCCAGTGCAGCCTCAGATGCCCACGCCGAGGCCGTGGCCAGTGGCCTTCATCCCTCCGTGAGTAAATTTCGTTTCGTTTTTTTGAGTTTTGAATCCACTTGCTGCGATTTGTCTTGTGTTGGTAGCTCAATCGAGGAGCTTTGAGTTTTATCTATCTGTCTAGTGAACTTCTTTCAAAAGTTTTTTTTATGTGGTTTCATAGATATATATAATATAGTAGGAACCCAAGTAGGAGGAGAAGAATCGAGGTCAAAATCAGATAGTTTCTTTTTTGGGAGGGACTAGATAGGCCTGTGGAAGTGTAGAATTAGACGCATTACTTCTTGACAGTGCTTTGCTTGTTACTATCGAGTTTGTCATGTACTATTATCATGGTCTCGCTGTTCTGTTTTTAGTGCTGTTAGATGTTTCAGCATTTTCAAATTTGAATTCCTATGAATGTCAGTGTAAGTATGCTATATGTCATTCACCTTGATGTATTTGCTACCGCTATATCTAGTTATCTACTGCATTTCATTTTGAGAGCATGGGTCTTTGTTGTACAGAGTTATCTTTGTGGCTCTTACACCTCAAAGTGCATATGGAGAAAATCTCACTATGCTACAATAGAGACATATGTATATTCTCCAAATTTACTGGAAATGAACTTCCATGGTATACTAGTTGCTTGTGAAAACCATTTTATTTCTTGATTCATATGTCATGTTACCTCCTGTTTGGAGATAACAAGAGCAAGCACAATATTACATTTTTAAACAACTCCATTTACTGATGTTCCTTTTGTTTTCTTTCAGGAAGCCGGTGGCTGAAATTAAGAGTACTCCTTCAACAAAGAGAAAGAAACATTGTAATTGCAAAAATTCACAATGTCTAAAGCTGTGAGTTTACTAGCACATGAAAGTTTACTTAGCCATTCCTATGAAATATTGAAAAGAAAACATGTAGGTTAATAGCACGCATACGTGTACATTACATTAGCATGGAAAGAATGTTGTCATTGCGTCAAGATTAATTTCAATGACTTTTGTTTGAATAAAAATTAAGTTGATTATCACGATCAATTAATGTTAGAGCATGCTCCAGCATCCTTGACCTTTTTACTGGACAAATAGATCAATTGTATGGGTAAGATCCATTATATGTGCACTTTCTAATAAAGCTAGCCCCGGGCTTGTGCCATGCCCAAGTAGCCAGCGCCTTCTGATCCAAAATGGTGCTTTAGAGTCCTTGGTTAATTTGAATTATAAAAAGTATCTCATGCTTTGGTAGTAAGAATATCAATAAAATTTTAATATATAATTTTGAAACAAAAATTGCAGATTTATCTCTTTGGTTTATACTATCATATATTCAAGGTTTCTTGTTTCATGGGGTGAGTTGATGGATCTGGTTTAATGTATAAAATAAGGTCATTTATTTTCCAACAGTTCATCATGTGAATAGATCACTAACGGTGTTTTATCTGTTAGGTACTGCGAGTGTTTTGGCAGCCGGTCTTTATGGTGATGGGTTGCCATTGGTTAACCAATTGTGGAAACTAATTGTGGGGAATGAAAGTGCCTAGGCAGGAGGCCATTACAGTACGAAGCAACGGAATCCAAAAGCCTTCCAAGCTGAAGATTGAAAATGGTTCAAATGCACTTAATCTTAGAAAGGTACTACATGCTTTCCTCTAATAGAATGTTAATGTGCATCATGTATTTTTGCAACATCCAATAGGGGAATAGCTTACACACAACAGTAGATACCCTCTAAGATAAAGTAGGTAATAAAACTTATACAACATATTAGTTCTACATTTCTGCTTTCATATTTATTATGTACCCTACAAGACGATGCTAATGAAGCCGGCTATAAGTTGGAAGAAATCCTAGAGCAAGAGTACGAGGACAGTCTGCTTTCTGAACCTTCTAAGATGAAGCTAGAATCTCACGAATAGCCCTATAATGGCTGCTAGCCTCTTTTGTAACCTCAATAAATTTTCATCTACAGCCTTTCTTGCCAGGCTGGCAAAAAAAATTGGAAAAGGAAAAGCTATGTAGCAACTAAACATCTCATCGGTTGCATTAAAACATATCATTTGATGCAATAATATTTATATTTATGTGTTTCTATGCTAATAATAAAAGCTAGTCAATTAATATTACCTATTAAACAAAACTAAACTAATAATAAAATGGTCATCTATAAGTTTGCAAGTCCTGGACAGAATTTCCGCATTTGACCAATAGTTTGCAGAAAATGAACGTTCTATCTGTATCTAGAAACACCACACATTGAACCAGAGATACATAACAGCAACAGCCTATAGTTAAAAATTCCACTTTTGCTTTATCAAGTGAAATTTAGTTTTTTAAAAAATGGAATCACTTGAAATATATCATACCATGTAATCTGAAATCTTGCTTTTGCACATTTTTACACTAAACAGTAGTTTATTTACAAAATGATTGCTGAAGGACTCGCTGATCTTGTTTAGGACTCTCTGCACAGCGTATTATACTTGTTCCTCAATTGTAGCAAACTATTTGATCAGTTCCTGCACATTCTAGAATGTGTGTAGGTGACTAAAAGAAAGATTTCATGGTATCAACCACTAATAGACCAAATGGCTAATAGCTCACATTTTTTATTTTGCAATCTATGTTGTTTATAAACTAAACTCTTCTGCACTGCCCACCATGTTAAACCAGTTATATTTTGCTTAGTGTTTCTTTTGAATTTTCAAACTCATTTTGTTTGGTAGATTTATATACAACATTCTCTTCATGTGATATTTTTATGCATTTGATTAATCTTAACTGCACACCAGGATGATGCTGGAGCACCAGCCTCACTTCCAAAGCATAATAAAGGTTGCCATTGCAAGAAGTCAGGATGTCTCAAGAAGTACTGTGAATGCTTTCAAGCAAATATCCTTTGCTCCAAGAATTGTAAATGCCAGGATTGCAAGAATTTTGAAGGAAGCGAGGAGCTACGGCTTATAACTCAAGGGGACAACTCATCAGATCGAAATAACATTCAACATGCTGCCAATGTTGCTTTGAATGGTGCAATTGGATCCTCAGGGTATAGATATTCTCCAGTGCGTAGGAAAAGGCCTCCAGAAGATCATCTTTATCAGAAACTAAATGGTGAAGGAAGCACGATGCAAACACAGTTTCAAGAGGTATTGTCCACTTGGGCTGGTTCCATGATAAATAACCTGTTAGATTAAATTCTGGTATAGTGTAACACATTTTGTTTCTCGGTAGTATAGTTTTGCTTCTGGATAGTTCTTTAAACTCAAAACATAGTTGGCTGTTCATCAACTTCACGCTGCTATGATTTTGTGTAACTTTAGCTGTGAATTTCCTGGAATCGTAACTGTTTCTTGTTTTCTACAGGCTAACCATGTGGACTCTTCAGAAATTACTTCTTCGACTGGACTCGAAGGGTGTTATAGTAACTACCAGTGTAGATCTAACGTGGTCTATAGGTAAGTAAAACCATGTTGGATTGTTGTACTAGATAAACTAAGAAAAAAACAGATATGAACTCCATAGCCAAATTATATCCAGAATAAATTGATGGCCAAAGGATTATAAAGAAAGGATGGCCAGCACCATCTCAGCTTCTTTGTGGCAGTGACCTCCTGTGTTCAAGTCATCAAGTGGTCAGGAATGGCAACTCACAAGGCTTGTGATTTTAAAAAAAGTACCCCTTTGGCATCAACTTCTTATGGTTTTGCCATCTAGAGGTTCTACTAGCCACACAGTTAATGTTAAAATACTGAAGCGTTGATTTTATCTGTTCATGAAAACATGTTTGGAAATCAACTGATCTTAAAAATATCATTTGGACTACTAATTTGAAGCATGATAATAACATACTGCAAAAATATATCATCATGGAAGTATTCTGATTTGCTGTATTGAATATATTAATATTAAGAAAATGTTCGTTTACCTATGTCAGTAGCCAAAATTTGAACAGTTTGGCTGCATGCTAACAAATATAGGCACTACTTCCTGGACATGCTTGTTAACAGAAATTGCTGCAGTTGTGTACCTTGATACTTATTTTGTTTACTTATCAAATATTTTTTAGGTCTGCGTTAGCAAACACTATCAGCCCTACGGATGCTACTGGTCTAGCCAAGCATTTGGTGATTGTATGCAGAAAGGCAGCAGACGCATTCCTGACGACAGCTGGTACACGATTTTATTGTTCTCCTTTAACTGATCTAATTTCAGAACTTCCATGAATGAACATGCAAAATAGATAAATTACTCTGTATTTAAATATATGAGGCTGTTAACTTTATTCGGTCTATGGTGCGCAATTTTGACCACTATTTTCTATTAGAATATAACGATAATGCCTAAATAATATAATATTGCAAAAGTACATATAATGAAAAAAATAATCTACCCATATGATTTCTATGTTTTCAAACTAAATATTTTGAGAACTATTGATGGTTAAGTTTCAAAAGTTTGACCAAGTCATAGTCGAAGCATCATATAAGAAAAATACATTCATGATGGAAAGGTGGACTACCTCGGTGATCAGAAAGACATTATCCTTCCTGTGTTTTTAGTTGCATGTTACTTGGCTGGTCAAAATGTTAACTGAACATGGATGGAGGACTCCAGATGCCTGCATATATTTTTATAAACTATTAATAAGAAAAATGGAATATGTCTTGCATGAGTGTTTTGCAATACAATTAGTATGAGTGTGTCAATAGACATTCTGTTTGCTATTTTCAATTTGAAAATTATGTGCCTACAGAAGATAGCTTTGTCTCATTAAGTTGCGTGTCCATTGCAAACTATCACTTTGGTGCAAACTTTAGTATACATTAATTTATTTATATAGTTTGAGCACCAAATGCTGATGGAGTACTGTTACTGTATTTTTATTAAAAAAATATTTTCGATTTTGCAGAAAACAAAGGGGAGATGGAAGTAGAAAGGGAAATCCACACAGATTCTCATGGTGCAACCAATATGGATCAGCAAAATGGAGGTGATTTTGGTCCTTGCTGTAACAGCCTAGAGGATTCTAGGCCAGCCTCTCCAGGAACACAAGCATTGATGTGTGATGAGCAAGGTAGTACATTTGGAACGGATTATAGAATTTCATTTCCAGTGGCATTGCATGATCAAGACACTTCAGAACTAAATGCTCAGCAAGAAAAAGCAGTGTTGACAGGGTTTCGAGACTACCTCCGGACAGTCATCACACGTGGAAAAATAAATGGTACGGAATTTGCTAAGATATTTCTATCCCTTAAACGATGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021316