BGIOSGA021339

From RiceWiki
Revision as of 13:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021339| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021339, complete gene.| tag = OsI_227...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021339

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021339, complete gene.

LocusTag

OsI_22753

Ensembl Transcript ID

BGIOSGA021339-TA

Ensembl Protein ID

BGIOSGA021339-PA

Length

4745

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13184036..13188780

Sequence Coding Region

13188640..13188780,13188477..13188546,13186805..13186863,13186636..13186711,13186337..13186414
,13186155..13186242,13185671..13185926,13185278..13185393,13184951..13185168
,13184829..13184860,13184525..13184627,13184344..13184452,13184036..13184204

Genome Context

<gbrowseImage1> name=IndicaChromosome06:13184036..13188780 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:13184036..13188780 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTTCTCTGGCTGCTGCTGTTGCTGCTCATGGCTTCCTCAACATCGTCGCGGTCCGAAATGAAGGCGGGAGAGGTGATCAGGAGAAGCCAATTCCCCGAGGACTTCTTCTTCGGCACAGCTTCTTCGGCATACCAGTATGAAGGTGCTGTGAGGGAAGGTGGCAGAGGGCCCAGCATCTGGGACACCTTCACCCACAATCATCCAGAGAAGATAGCAAATGGAAGCAATGGTGATATAGCAATAGATTCCTACCACCGGTACAAGGAGGATGTTGGAATCATGAAGGGTTTGGGCTTGAACGCGTATAGATTTTCAGTTTCCTGGCCGAGAATTCTTCCTAATGGAAAACTGAGTGGAGGGGTTAACCTAGAAGGAATCAAATACTACAATAATCTCATCGACGAGCTAATTTCAAAAGGTGTTGAACCGTTTGTGACCCTTTTTCACTGGGACTCTCCACAAGCTTTAGAACAACAGTACGGTGGATTCTTGAGTAACCTCATTGTGGAAGACTTCAGGGACTATGCAGACATCTGCTTTAGGGAGTTTGGTGACAGGGTAAAATACTGGATTACATTCAATGAGCCTTGGAGTTTCAGTATTGGTGGCTATTCCAACGGCATATTAGCACCTGGAAGATGCTCCTCTCAGGGAAAGTCAGGTTGCAGCAAGGGAGACTCTGGGAGGGAGCCTTATATTGTAGCTCACAATCAACTTCTGGCTCATGCAGCAGCAGTTCAGATTTACAGAGAGAAATACCAAGGGGGACAAAAAGGGAAAATCGGGATTGCTATTATTAGCAATTGGATGATTCCCTATGAAGATTCTAAGGAAGACAAGCATGCTACCAAACGTGCATTGGATTTCATGTATGGATGGTTCATGGATCCTTTAACCAAGGGAGATTATCCAGTCAGCATGAGAACATTGGTTGGTAACAGATTACCAAGATTCACAAAGGAGCAGTCAAAAGCTATAAATGGATCATTCGACTTCATCGGTCTCAATTACTATACAGCAAGATATATTCAGGGTACTAAACAAGATAGTAACAGTCACAAAAGTTACAGCACTGATTCACTGACTAATGAGAGAGTGGAAAGAAATGGAACAGATATTGGTCCAAAGGCTGGTTCATCTTGGCTCTACATCTATCCAAAAGGAATAGAGGAACTATTGCTATACACCAAGAGGACATACAACAACCCTACTATCTACATCACAGAAAATGGTGTTGATGAGGTTAACAATGAAAATTTATCTCTTAAGGAGGCCTTAATTGACACTACCAGAATAGAGTTCTACCGGCAACACCTATTCCATGTTCAGAGAGCCCTAAGGCAAGGAGTTGATGTACGAGGATACTTTGCATGGTCACTGTTCGACAATTTCGAGTGGATGGATGGTTACAGCGTTCGATTCGGCATTAACTACATCGACTACAAGGATGGACTGAAGAGATATCCAAAGCGATCCAGCCAATGGCTTCAGAATTTCCTTCATAACTGA</cdnaseq>

Protein Sequence

<aaseq>MELLWLLLLLLMASSTSSRSEMKAGEVIRRSQFPEDFFFGTASSAYQYEGAVREGGRGPSIWDTFTHNHPEKIANGSNGDIAIDSYHRYKEDVGIMKGLGLNAYRFSVSWPRILPNGKLSGGVNLEGIKYYNNLIDELISKGVEPFVTLFHWDSPQALEQQYGGFLSNLIVEDFRDYADICFREFGDRVKYWITFNEPWSFSIGGYSNGILAPGRCSSQGKSGCSKGDSGREPYIVAHNQLLAHAAAVQIYREKYQGGQKGKIGIAIISNWMIPYEDSKEDKHATKRALDFMYGWFMDPLTKGDYPVSMRTLVGNRLPRFTKEQSKAINGSFDFIGLNYYTARYIQGTKQDSNSHKSYSTDSLTNERVERNGTDIGPKAGSSWLYIYPKGIEELLLYTKRTYNNPTIYITENGVDEVNNENLSLKEALIDTTRIEFYRQHLFHVQRALRQGVDVRGYFAWSLFDNFEWMDGYSVRFGINYIDYKDGLKRYPKRSSQWLQNFLHN</aaseq>

Gene Sequence

<dnaseqindica>1..141#235..304#1918..1976#2070..2145#2367..2444#2539..2626#2855..3110#3388..3503#3613..3830#3921..3952#4154..4256#4329..4437#4577..4745#ATGGAGCTTCTCTGGCTGCTGCTGTTGCTGCTCATGGCTTCCTCAACATCGTCGCGGTCCGAAATGAAGGCGGGAGAGGTGATCAGGAGAAGCCAATTCCCCGAGGACTTCTTCTTCGGCACAGCTTCTTCGGCATACCAGGTATGTTCTAGAAGCTTCTGGAGAATACTGGAAGATGTGTGTATCTGTGTGTGCATCACTTGGCCCTTTGTTACAAACTTTTTGATGTTGCAGTATGAAGGTGCTGTGAGGGAAGGTGGCAGAGGGCCCAGCATCTGGGACACCTTCACCCACAATCATCCAGGTCTCCTTGCTCCTATGATCCTATCCAAGATTATATTTTTTTACTGTAATCTTAACCCTTATCTATTCTTAAGCATATCAAATTTATCAATCTGACTGTTACATACTAGGATATTTAATGTGATTTAATGTGTCGACAATAGTAAGATTTGAAACAGGACTATGCAAAATTTTAACCTGTTGTCAACTTGGTGAATGACAGGGAATTACTTTGAACAATATCATAGCAGCCTTCTGACTAAGGAAAAGGCAAGCAAAGTTAGACAAGATCAAGTCAACTGAGTTATAACACAGACACACAGTAGCCAGTAGGACCTTCAACCTTAGAAGTCAAAACCCTCTCTGAATTATGAATTATGACAAAACTTCGTACACAATATTTATGCTTTTTAAGCAGTTGCAAATGTGTGAATCACGCAAAAGTTTCTATTTGAAAAAGGGGCATAGGAGATCTGCGCCCTTGATTAATAGTGGAAGAAAGGATAGAAATTACATACTCCTTCTGTCACAAGATAAGTTGACTATTGGAGTTCAAACTTTGTCCCAAAATAAATTGATTGTTACCTTCTTGCCTACCACGGTCCACAAATCAAAGACAGTCAGACTAAACATTTCCAAACTGGCAAAACAAAAAAGGAGAAAAAAATGGTTACCAAACTTCCAAACAAGCAAGCACAGACAATCCTGTGATCTTCTGGTTGTCATAAAGTAATACCACTTGAAAGATGCCGAGATCAGAGGCCACTCCAGAAAGAGAACCTAGTTAAGTGCATTCCTTCCATAGCATGTTAGACATTGGTTAATTTAGTGAAACACAACATCAATGTACCAACCTGTACCACAAAACCTCCTACACTAGACATTGTATATTCTTTAGTCTTTTGACCCTTAAAACAATTAGGGTAGAAGGCACATAAAACACCAATCTAATGCTTGATAGGGACTTTAAAGCACTTCAGTCATATGGTCAATTTGACCTACGAGAAACCAAAAGTAAATTTGTTATGTAGGTACTATAAATCTTCATTCTAACCTACTAACAAGATCAATTTTACGGTCCTTGAGGAGGTACTATGAGGTACCAAAAATTTAGTGTAAAATTTGGTATCTCATGGTATCTAGGTACCAAGAGATACCAAATTTACAATAGAAAAAGGCGGTACCTTATAGTATCTCCTCAAGGACCGTAAAATTACTATACTAACAAAGGAAGGGGAGAAAGAAGAAGCAAAAGGCTAGTGAAAACAAATTTTCAAGCATCTGATGATAGATTGGAACTTTGCTTAAGTAGTTTAATTTTTGTTAGATGATGGCTTAAGTAGTTCAATGACCGCTATTAGCTATCACTACTTTATTACTCCATGTAACCACAAGCAAATAAACAGCTTAGTTTTCGTGTACTTAAGTTACAGTCCACATGGTTCAAAAGATGTCTATAGAGAACCTAATTAATAAGCTACTGGCTATTTATTTTTCCTTATATACCTCAAGCACTTGGTTATTAGACAACTCAAGGATGTCATGCATGAAAGAAGCATGTCTAAATCATGTTTAATTAACTGACATTCAGATACGGTGCTTCATAATCAAACTACCAATAATTTGTTCATGCAGAGAAGATAGCAAATGGAAGCAATGGTGATATAGCAATAGATTCCTACCACCGGTACAAGGTAATTCTTTTAAGATAACATGATCAACTTGTTATATTCTCTACACAAGACCTAATGTTTAGAATATGCTAATATGTTATTCACTAAGTGCAGGAGGATGTTGGAATCATGAAGGGTTTGGGCTTGAACGCGTATAGATTTTCAGTTTCCTGGCCGAGAATTCTTCCTAGTAAGTGATTCCTCCTTTATTTTATTCTATTTTTCGTTGAGGCTTGGAGCATATTCCAGGTACCACTTATCATTATAGCTGCTCAAACTAATATTTTTCCATTGATCTGCAATTGAACACTACTGTAACTTAATTTGATAGCTGTATAGATTAAGGAAAGAAAAAGAGTAAAATAAGTTGATCGCAGGTCAGTACCTTATGCAATGATGATATTTATATAGATGGAAAACTGAGTGGAGGGGTTAACCTAGAAGGAATCAAATACTACAATAATCTCATCGACGAGCTAATTTCAAAAGGTAGGGATTACATATTTCCGCAGTGTAAATTCAAAACAAATTGCTCTTATTACTATATGTTTACATCTTAATAATGCCTAACAAGCAAATACAGGTGTTGAACCGTTTGTGACCCTTTTTCACTGGGACTCTCCACAAGCTTTAGAACAACAGTACGGTGGATTCTTGAGTAACCTCATTGTGTAAGTAAAGCATATGACTCTTCCTATATGTACCCGAAATTTACTGATACTCCAATTACTAATAAGAACCATGATGAAATGACAAAACAAAACTGGAATCCCCTCCCTGTGTGTATCTTCTTATTATTAATGAAATGATGCGCTCTCATGCGTGTTCGGAAGAAAAAAAGATATGACAAGAAAAATAAAGCATAGGAGTTAATTAACAGCTTGTGCCAACATTATCAGGGAAGACTTCAGGGACTATGCAGACATCTGCTTTAGGGAGTTTGGTGACAGGGTAAAATACTGGATTACATTCAATGAGCCTTGGAGTTTCAGTATTGGTGGCTATTCCAACGGCATATTAGCACCTGGAAGATGCTCCTCTCAGGGAAAGTCAGGTTGCAGCAAGGGAGACTCTGGGAGGGAGCCTTATATTGTAGCTCACAATCAACTTCTGGCTCATGCAGCAGCAGTTCAGATTTACAGAGAGAAATACCAAGTATGACCTAGTTTTCTTTACTGTGAATTTGTGGTTATTTTCAGTTAAAAAAACAGAGGTAAAGATCAATAATATAAAATGCATTTTTACAGACGAAGTATGTTAATAGATAAAGACCTTTTAGTTTTTTTTTTCTCGAACATGCAGACTTTTTACTAATGAAAACATTAGATATTAATGGTAAAAGAAAAGGCAGATGTAGATAGATAGTTCATTTCCGTAGTTTTTGCTAGCTTATTTGTTGAAACTTGAATGTGATAATCATGTAATCATGCAGGGGGGACAAAAAGGGAAAATCGGGATTGCTATTATTAGCAATTGGATGATTCCCTATGAAGATTCTAAGGAAGACAAGCATGCTACCAAACGTGCATTGGATTTCATGTATGGATGGTGAGTTCTTGTTATGTGCAGTACGGCAAAGAGCTCAGCTTCATACTTGAATTTTCAGATCAATACATACAGTATTTTTTTTCTTTTTTCTGATCATCAAATTGAATAGGTTCATGGATCCTTTAACCAAGGGAGATTATCCAGTCAGCATGAGAACATTGGTTGGTAACAGATTACCAAGATTCACAAAGGAGCAGTCAAAAGCTATAAATGGATCATTCGACTTCATCGGTCTCAATTACTATACAGCAAGATATATTCAGGGTACTAAACAAGATAGTAACAGTCACAAAAGTTACAGCACTGATTCACTGACTAATGAGAGAGGTAATCATGCAAGAACTCTGTTTTCTGTTCTCCAATTAATTGAATTACTTTGTTGAGCTAGCTAATGGTTTTCTGAAAATGCAACCATAGTGGAAAGAAATGGAACAGATATTGGTCCAAAGGTATGATTTAAATCAGACATCATCATGTTCTTCATATGTACGAGCTAGTTCATATTATTACACATTCAATATATAATCCGTAGTGGTAATCAGTGGATAATAAAGAACACATATAGTTAATTAAACATAGAAGGAATAGAGTTAATAAATAACACATATATAGTTAATAAAAAAACATAAATATATTTAATTTGTATCCAGGCTGGTTCATCTTGGCTCTACATCTATCCAAAAGGAATAGAGGAACTATTGCTATACACCAAGAGGACATACAACAACCCTACTATCTACATCACAGAAAATGGTACGGCATTCTAACTGTTTACCAAAAGTTGTTCTGCTGCTTATCAAAAAATAAATAACACTCGTGTTACAGGTGTTGATGAGGTTAACAATGAAAATTTATCTCTTAAGGAGGCCTTAATTGACACTACCAGAATAGAGTTCTACCGGCAACACCTATTCCATGTTCAGAGAGCCCTAAGGTAATTTTGATGATCAATTAATTGCTTGACAATATAGTGGACGAAATCACAACAAATATCTCATTGTTTCAATATAATTTGGATCGAAATGGTTAAGTATCTGCGTCAAAATAAAAAAAATACTGTCATGGAATGTCAGGCAAGGAGTTGATGTACGAGGATACTTTGCATGGTCACTGTTCGACAATTTCGAGTGGATGGATGGTTACAGCGTTCGATTCGGCATTAACTACATCGACTACAAGGATGGACTGAAGAGATATCCAAAGCGATCCAGCCAATGGCTTCAGAATTTCCTTCATAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021339