BGIOSGA021358

From RiceWiki
Revision as of 13:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021358| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021358, complete gene.| tag = P0734C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021358

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021358, complete gene.

LocusTag

P0734C01.17

Ensembl Transcript ID

BGIOSGA021358-TA

Ensembl Protein ID

BGIOSGA021358-PA

Length

2757

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12818182..12820938

Sequence Coding Region

12820177..12820938,12818182..12819999

Genome Context

<gbrowseImage1> name=IndicaChromosome06:12818182..12820938 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:12818182..12820938 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAGAAGAATCTTGAAGAGCCCGACTCCCCTCTAATTGCATCTTTGTCGGCACCGAAATTCATGCAAAATTCTGCAGAGCCTGAGCTAACTGCAGGTACTGATTGTGAGAACAGTAATCTTCAGAACAGAGAAACAGCCAACTTTGAGGCAGCAATGCAGGAAGAACTTCCAGAAATCTTAGTTGGCAACAAAAGCAATCTGCAAGAAATATCAACAGAACAAAAGGCTCCTATTAGCGTCTGCGCAACTCCATCTGAAGTAGACAACAGTGGACTTGTATCTGCCAGTGATCCTCATGCTTTTTCAGTGACCTCTCAGAATGATGATGAATCAACAGAACCCAGCAGTGATTCTACCACAATTCCACCTTCAGAGAAGAACACCCACTCAACTTCACAGACCTCCGACAGGCTGAAAGCAGTGGTCCAACTACAAGATACACCCCTGCATAACACTGGGGATGATGCCTTTTGTTCCTATTCTGTGAAGGCTTCATATGAGACTTCAGCTGCGACACCAGCAAAGGTGAAAGAAAAGAAGCCACATCTGATGCATCGTTTTAATGAGCGCCAAATGAGCTTAAGAGACATGCGGCAGAAGGCCCCTGCACCTTTGAACAGATCAAACAGCGGGAAGAACTTCAGAACAGATAACACCTTTGTCGATACAACAACCCACATTGAATCAGTTAAGGTGGCGGCCTCAAGATTTGGTGGCAGCGTCAACTGGAAAACTCGTATAACAGAGCCAGAGCAGGAGAATGAAATCGTACTTGAACTTGATAGGCTGAAGAAGGAAATTTCAGAAAGTAAACGACAAGCTGAGGCTGTAGAGGCAGCAAAGGTGCCTCTGTCCAACGAGTATGAGAAAACAAAGAGGCTAATTGAAGGATTGGAACATGACCTGGAAAAGGCACAAGAGGAGGAGATAATTGCGAGGTTGGGTTTGGAGTTATTTCAGTTAATAGTACATGAGATGGGGGAAGGAGATACCAGTGATGGTGGTGTCACTGGCAGGGAGAAATTGGATATAATCAAAGAACAGTACAACGCAGTGCTGGCCAACTTAATGTTAGTGAAGGATGAGTCCGGAAAAGTGCAGGAGAATTACGAGACCTTGTTGATTGAACGGGATATTTCTATCGGGAAAGCTCAGTTAGCCGTTTCAATGTCTGAAGGTGCTGTAAGGAAGGTTGAGGAGCTCACCGTAGAACTTAACAGACTGAAGGTGGAGTTGGAATTGGCTCATTCCACATGCCATGATGCTGAAAAACATAGTAAAGACACGTCCTTGGCATGTGATGAGGATTCCCTTAAATGGAAGAGTGATCTGAGGCAAGCAGAAGAGGAGCTCAATCAGCTCGCCAAGAAAATTTCTTCTATTGAAGAATTGAAATCAACACTTGACACATCAACCGGCTTGTCGCTCAAGCTGAAAAATGAGCTAGCTGGATATGTGGAAGCTAAGCCAATTGATAAAGAAGCACAAGGAAATATTACTCAAAGATCTTTACACAATGAAGTTATTCTATCTACACGAGAGTTGGAGGAGTGTCTGATGAGCGTAGATAAGGTGAGAGATGAAGTTTGTGCTCTGAATGTTGCTGCAGCATCGCTAAAAACAGAGTTGATCAAAGAGAAAACGGCACTTGCTACCATGAAGCAGATGGAAGCGACGTCATCCATCGCTGCTGCATCTCTAAGGGTGGAGATTCAGCTAGCACTCCGGGAACTGGAAGCAGTTCAGGCCAAGGAGAAAGAATCCCGAAATGGAATGCTTGGGTTGCAGAAGATTATGGAAGATACAGCCAAAGAAGCTGATGAGTCTAAGTCCATCGCAAGAGAGGCACAGGAGAAGCTAAGAAAGGCCAAGGAGGATATGGACCATGCAAAATCTTGTCTTGATACTATGGAATTCAGGATCCAGGCAGTTCTAAAGGAGATGGAGGCCACGAAAGAGTCCATGAGGCTGGCAATTGATGCCCTCAGACCGTTTGACAGTGAGCTTCCAGTGGATATCGAGGAACAAGGCTCTCAGATAGTCACAGTTGACCTGGATGAATACCAATCTCTCATTGCGAAATCCAGCAAGGCAGAAGAACTTGTCCATGAAAGGACAGCTTCTGCAATTGCACAGGCCAAGATAGCCAAGGAGTCCGAGTCTCGTACCTTATCAACACTGAGTGAAACACACAAGGTTTTGGAACAACGAAAGCAGGCATTGGTTGCTGCCACAGAGAGAGCTGATAGAGCCACTGAAGGCAAGCTTGCCATGGAGCAAGAATTGAGAAAATGGAGAGAAGAGAATGAGCAGCGTCGTAAGGCTGGCGAAGCTTCGAAATCGCAACTTAATCCATCAAGCACCCCTGTGATCATCGTTGAACGCAGCAGCGACACCAAGAGCACAAGCAAGGATGATAGTTACGCCTCGGTTCATCCACTGCTGGATATGTCTGCGAGGAGTACCCCTAATGATTCAGCGTTGCTCTCGAATAAGAAGAAAAGAAAGAAGCTGTCGTTCTTCCCCCGCATCACCATGTTCTTCACGAGGAAGAAGTCTAGAGCTGCTATATGA</cdnaseq>

Protein Sequence

<aaseq>MAEKNLEEPDSPLIASLSAPKFMQNSAEPELTAGTDCENSNLQNRETANFEAAMQEELPEILVGNKSNLQEISTEQKAPISVCATPSEVDNSGLVSASDPHAFSVTSQNDDESTEPSSDSTTIPPSEKNTHSTSQTSDRLKAVVQLQDTPLHNTGDDAFCSYSVKASYETSAATPAKVKEKKPHLMHRFNERQMSLRDMRQKAPAPLNRSNSGKNFRTDNTFVDTTTHIESVKVAASRFGGSVNWKTRITEPEQENEIVLELDRLKKEISESKRQAEAVEAAKVPLSNEYEKTKRLIEGLEHDLEKAQEEEIIARLGLELFQLIVHEMGEGDTSDGGVTGREKLDIIKEQYNAVLANLMLVKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHSTCHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLSLKLKNELAGYVEAKPIDKEAQGNITQRSLHNEVILSTRELEECLMSVDKVRDEVCALNVAAASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRNGMLGLQKIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEMEATKESMRLAIDALRPFDSELPVDIEEQGSQIVTVDLDEYQSLIAKSSKAEELVHERTASAIAQAKIAKESESRTLSTLSETHKVLEQRKQALVAATERADRATEGKLAMEQELRKWREENEQRRKAGEASKSQLNPSSTPVIIVERSSDTKSTSKDDSYASVHPLLDMSARSTPNDSALLSNKKKRKKLSFFPRITMFFTRKKSRAAI</aaseq>

Gene Sequence

<dnaseqindica>1..762#940..2757#ATGGCAGAGAAGAATCTTGAAGAGCCCGACTCCCCTCTAATTGCATCTTTGTCGGCACCGAAATTCATGCAAAATTCTGCAGAGCCTGAGCTAACTGCAGGTACTGATTGTGAGAACAGTAATCTTCAGAACAGAGAAACAGCCAACTTTGAGGCAGCAATGCAGGAAGAACTTCCAGAAATCTTAGTTGGCAACAAAAGCAATCTGCAAGAAATATCAACAGAACAAAAGGCTCCTATTAGCGTCTGCGCAACTCCATCTGAAGTAGACAACAGTGGACTTGTATCTGCCAGTGATCCTCATGCTTTTTCAGTGACCTCTCAGAATGATGATGAATCAACAGAACCCAGCAGTGATTCTACCACAATTCCACCTTCAGAGAAGAACACCCACTCAACTTCACAGACCTCCGACAGGCTGAAAGCAGTGGTCCAACTACAAGATACACCCCTGCATAACACTGGGGATGATGCCTTTTGTTCCTATTCTGTGAAGGCTTCATATGAGACTTCAGCTGCGACACCAGCAAAGGTGAAAGAAAAGAAGCCACATCTGATGCATCGTTTTAATGAGCGCCAAATGAGCTTAAGAGACATGCGGCAGAAGGCCCCTGCACCTTTGAACAGATCAAACAGCGGGAAGAACTTCAGAACAGATAACACCTTTGTCGATACAACAACCCACATTGAATCAGTTAAGGTGGCGGCCTCAAGATTTGGTGGCAGCGTCAACTGGAAAACTCGTATAACAGAGCCAGAGCAGGTAACTCAGAGTTGTTCCCTTCCCTTATTTGCATATGAAACATCTCAGCTACAGCTCTATAAATTATGCTGTCATTTGTATTTTTTTCTTTAATTTTGTAAAACCTTGCTTTACCACTTAATTTACTTCTTTTCATATGTGATCTCCATGTAAGATTAACAATCTTAGTACATGCAGGAGAATGAAATCGTACTTGAACTTGATAGGCTGAAGAAGGAAATTTCAGAAAGTAAACGACAAGCTGAGGCTGTAGAGGCAGCAAAGGTGCCTCTGTCCAACGAGTATGAGAAAACAAAGAGGCTAATTGAAGGATTGGAACATGACCTGGAAAAGGCACAAGAGGAGGAGATAATTGCGAGGTTGGGTTTGGAGTTATTTCAGTTAATAGTACATGAGATGGGGGAAGGAGATACCAGTGATGGTGGTGTCACTGGCAGGGAGAAATTGGATATAATCAAAGAACAGTACAACGCAGTGCTGGCCAACTTAATGTTAGTGAAGGATGAGTCCGGAAAAGTGCAGGAGAATTACGAGACCTTGTTGATTGAACGGGATATTTCTATCGGGAAAGCTCAGTTAGCCGTTTCAATGTCTGAAGGTGCTGTAAGGAAGGTTGAGGAGCTCACCGTAGAACTTAACAGACTGAAGGTGGAGTTGGAATTGGCTCATTCCACATGCCATGATGCTGAAAAACATAGTAAAGACACGTCCTTGGCATGTGATGAGGATTCCCTTAAATGGAAGAGTGATCTGAGGCAAGCAGAAGAGGAGCTCAATCAGCTCGCCAAGAAAATTTCTTCTATTGAAGAATTGAAATCAACACTTGACACATCAACCGGCTTGTCGCTCAAGCTGAAAAATGAGCTAGCTGGATATGTGGAAGCTAAGCCAATTGATAAAGAAGCACAAGGAAATATTACTCAAAGATCTTTACACAATGAAGTTATTCTATCTACACGAGAGTTGGAGGAGTGTCTGATGAGCGTAGATAAGGTGAGAGATGAAGTTTGTGCTCTGAATGTTGCTGCAGCATCGCTAAAAACAGAGTTGATCAAAGAGAAAACGGCACTTGCTACCATGAAGCAGATGGAAGCGACGTCATCCATCGCTGCTGCATCTCTAAGGGTGGAGATTCAGCTAGCACTCCGGGAACTGGAAGCAGTTCAGGCCAAGGAGAAAGAATCCCGAAATGGAATGCTTGGGTTGCAGAAGATTATGGAAGATACAGCCAAAGAAGCTGATGAGTCTAAGTCCATCGCAAGAGAGGCACAGGAGAAGCTAAGAAAGGCCAAGGAGGATATGGACCATGCAAAATCTTGTCTTGATACTATGGAATTCAGGATCCAGGCAGTTCTAAAGGAGATGGAGGCCACGAAAGAGTCCATGAGGCTGGCAATTGATGCCCTCAGACCGTTTGACAGTGAGCTTCCAGTGGATATCGAGGAACAAGGCTCTCAGATAGTCACAGTTGACCTGGATGAATACCAATCTCTCATTGCGAAATCCAGCAAGGCAGAAGAACTTGTCCATGAAAGGACAGCTTCTGCAATTGCACAGGCCAAGATAGCCAAGGAGTCCGAGTCTCGTACCTTATCAACACTGAGTGAAACACACAAGGTTTTGGAACAACGAAAGCAGGCATTGGTTGCTGCCACAGAGAGAGCTGATAGAGCCACTGAAGGCAAGCTTGCCATGGAGCAAGAATTGAGAAAATGGAGAGAAGAGAATGAGCAGCGTCGTAAGGCTGGCGAAGCTTCGAAATCGCAACTTAATCCATCAAGCACCCCTGTGATCATCGTTGAACGCAGCAGCGACACCAAGAGCACAAGCAAGGATGATAGTTACGCCTCGGTTCATCCACTGCTGGATATGTCTGCGAGGAGTACCCCTAATGATTCAGCGTTGCTCTCGAATAAGAAGAAAAGAAAGAAGCTGTCGTTCTTCCCCCGCATCACCATGTTCTTCACGAGGAAGAAGTCTAGAGCTGCTATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021358