BGIOSGA021377

From RiceWiki
Revision as of 13:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021377| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021377, complete gene.| tag = OsI_226...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021377

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021377, complete gene.

LocusTag

OsI_22671

Ensembl Transcript ID

BGIOSGA021377-TA

Ensembl Protein ID

BGIOSGA021377-PA

Length

6918

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12306379..12313296

Sequence Coding Region

12313197..12313296,12307782..12307789,12306379..12307734

Genome Context

<gbrowseImage1> name=IndicaChromosome06:12306379..12313296 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:12306379..12313296 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTGCTTCTTCCCCTTCTCCTTGCCTGCTCTCTCCTCTTCACCATTGCAACCCCTATCAGAGACATCACCGACGTTTGTGCCTCACAGATCAGTGATTTCCAGCCCCTGCTCGCCGGCGCCACTCCCCTCCGACCTCCCCTTCTCCGCCGTCGTCACCCACGACGACGCCCGCATCGCCCACCTCGCCTCGCGCCTCGCCAACAACCACCCGACATCGCCGTCGTCATCGTCTCTCCTCCACGGCCACCGCAAGAAGAAGGCCGGCGGCGTCGGCGGCTCGCAGGCGTCGTCGTCATCCGTGCCGCTGACGCCGGGCGCGTCGGTGGCCGTCGGCAACTACGTGACCCGCCTGGGCCTCGGCACGCCGGCGACCTCCTACGTGATGGTGGTCGACACGGGGTCGTCGCTCACCTGGCTGCAGTGCTCCCCGTGCTCGGTGTCGTGCCACCGGCAGGCCGGTCCGGTGTTCGACCCGCGCGCGTCGGGCACGTACGCCGCCGTGCAGTGCTCCTCGTCGGAGTGCGGCGAGCTCCAGGCCGCCACGCTCAACCCCTCCGCCTGCTCCGTCTCCAACGTCTGCATCTACCAGGCCAGCTACGGCGACAGCTCCTACTCCGTCGGCTACCTCAGCAAGGACACCGTCTCCTTCGGCTCCGGCAGCTTCCCGGGCTTCTACTACGGCTGCGGCCAAGACAACGAGGGCCTCTTCGGCCGCTCCGCGGGGCTCATCGGCCTCGCCAAGAACAAGCTCTCGCTGCTCTACCAGCTAGCCCCGAGCCTCGGCTACGCCTTCTCCTACTGCCTCCCGACCTCGTCGGCGGCGGCGGGCTACCTCTCCATCGGCTCGTACAACCCCGGCCAGTACTCGTACACGCCCATGGCGTCCAGCTCCCTCGACGCCTCGCTCTACTTCGTCACCCTGTCGGGGATCTCGGTCGCCGGGGCGCCGCTCGCCGTGCCGCCGTCGGAGTACCGCAGCCTGCCGACGATCATCGACTCCGGCACGGTGATCACGCGGCTGCCGCCGAACGTGTACACGGCGCTGAGCAGGGCCGTGGCCGCGGCCATAGCCGGCGCCGCGCCGCGGGCGCCGACCTACTCCATCCTGGACACCTGCTTCCGGGGCTCCGCCGCGGGGCTGCGCGTCCCGCGCGTGGACATGGCGTTCGCCGGCGGCGCGACGCTGGCGCTGTCCCCCGGGAACGTGCTCATCGACGTCGACGACTCCACGACGTGCCTGGCGTTCGCGCCGACCGGCGGCACGGCGATCATCGGGAACACGCAGCAGCAGACGTTCAGCGTGGTGTACGACGTCGCGCAGTCCAGGATCGGCTTCGCCGCCGGCGGCTGCAGCTGAGGACCCAAACTGCAGCTGGCCGACTCAAGCTAGGTAAAAGAGCAATGCTGCTTCTTCTGCTGCTGCCGCCGCCTCCTATCTCTGCTCAGGCACAGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MEVLLPLLLACSLLFTIATPIRDITDVCASQISDFQPLLAGATPLRPPLLRRRHPRRRPHRPPRLAPRQQPPDIAVVIVSPPRPPQEEGRRRRRLAGVVVIRAADAGRVGGRRQLRDPPGPRHAGDLLRDGGRHGVVAHLAAVLPVLGVVPPAGRSGVRPARVGHVRRRAVLLVGVRRAPGRHAQPLRLLRLQRLHLPGQLRRQLLLRRLPQQGHRLLRLRQLPGLLLRLRPRQRGPLRPLRGAHRPRQEQALAALPASPEPRLRLLLLPPDLVGGGGLPLHRLVQPRPVLVHAHGVQLPRRLALLRHPVGDLGRRGAARRAAVGVPQPADDHRLRHGDHAAAAERVHGAEQGRGRGHSRRRAAGADLLHPGHLLPGLRRGAARPARGHGVRRRRDAGAVPRERAHRRRRLHDVPGVRADRRHGDHREHAAADVQRGVRRRAVQDRLRRRRLQLRTQTAAGRLKLGKRAMLLLLLLPPPPISAQAQK</aaseq>

Gene Sequence

<dnaseqindica>1..100#5508..5515#5563..6918#ATGGAGGTGCTTCTTCCCCTTCTCCTTGCCTGCTCTCTCCTCTTCACCATTGCAACCCCTATCAGAGACATCACCGACGTTTGTGCCTCACAGATCAGTGGTATATATGCCTGACCTTGCTTAATTTTCTACATGTAGTTCAGTTCATCTGTTGCTTTCTCGTCATTTCTTTGCTGTTATTCTTCTGTTACTGCTGAAGTATTGTATGATCATGTGAATTGTTAGATTCCTTAATATAATTAAGGACCAAAACATAGTATGTCCAATGGATTATGCCCATATAGATAGAGAGAATAGTTTAGTGCTTAGCTTGAACTGTCATGACAGTTTTTGCAAGCAGAGACAGTGTAATCTTCTTGACAAGTACAGAATTAACAGATTACTGGATTCTTTCCAAGGCTGGTGTTACATTTAGATGTTTTAGTACAAAACAGATGGACAAAAAAATTATAGTACACAGAAATCCACCATGCTTTCTCGTTGCCCTGTTGCTCCTGAGATCACGATAATTAGTTCCAGCCTGTTTCTTGCCTGAAAGGCTGAGACACTGTGATCCAATTGAATTGGAAGCAGCGGTGCTTCATTATTACTTCCTGAATATTTCCACGACATCCAAACACATACAAATTTGCGTACTACTGATCTCGTGAATCCAATTGCTGCCACCTCCAATTCAGTTCATCTCTATTTGCTTTGCACAAGATGGTCAAGCCTTTTTCTCTTGCTTTTGGAAATATGAAGGCTAGGAGAGGCAAGAATCCAAGAGAGAACTAAGGAAGTGGTAGATGGCGCGTCAACTGTCACTAGCTAGGTCCACACACAGTACTGATCTCTTTTCAATTTAGTGATATGATTAATTGAGATGCTATTAATCATCATCTTTTTGTCCTTTTGGTTTGCCATGATAACAGAGATCCGTATGAACCTATCCTATGCAATATTGCATTAATCTCTGTAAAGAATTTAGCATAGGAATGGCTTCAGGAGGAAAAAAAAAACAGAGAAACAACGTTAATCTTGTAAATCTATTCTAGTAGGCTGTAATTAACTCCTTTTTAACCTGAATAAATTGCCGATAGATGGTAATTAATATTGTTCTGAGAGTCTGCGATCAGCAGTTCCTTTTGCAGTTTCAGCCTTTGAGCTGATCGATCTTTTAACATACTACCTTCGTCGGTTCGTAGCTAAAAAGACACTCTTTTAAAAAAGGTTGGACACTAAGGACTTAATGTCAATAGTTTTAAGAAAGAAGAAGTAAATATTTCTTGTGAGCGTCGACAAGAGTCGAACCCGGGCCAATGGGGTGCAGAACAACCATATTAGGGCAGTCTCAACCCATAACACTAGACATAGTTTCCATAAATTCCACATCATCGATAAACTAGTACTAGTACTAGACACTACTCTTCCAATGCAAACACCACTATTCCATATTTCAATTTAATGCTAGTTATCTCACATGATGTCTTAGATGTTGTGTAGAAACCATGTCTCATGCAAGACATGGTTTCCTTCTCTTTCCTCATTTATTCACTTGCCATATCATTTTTTATCCTAGGTGGCAACTTATTTAATGCTATGGACACCATCCTAGTCATTGGGTTGGGAATGCCCTTATCAGACAAAGTTAAGAGCAATGATGAACACTACAGCAAATTAGCCTATCAATAGCCGACCTGAAAAACATGGAGCTTGTCTTTAGGAGCACTGAATCAAGTGATGCTCTGCCCCTTTTCTTTGAAGCTATAAATAGCAGTGGTCCAGCTATGAATTTTCCAAACCAAACCCTATAGAACTCGACAAAATCCAGCAAGTACCATGGTCCATGGATGATTAAGTTATTTGATTTAACAATTTTTGGATGCTTCTAATATGATATAAAAATATTCGAAATGCGCACTAGTTTCTGCACTATGTCAGGCGTTTTTTGGGGGTACGCTACCTGTAAAAAAGTGACCATCATCTACAGAGAAGAGTCAACCAATGACGTGTGGCGAATAGACCCTCGCGTGCACCGATTAAATTCTCTTCTTCTGAGTAATCAAGTCCACAAAATTGTTTGGTTTACTCTTGACTCCGCTTGACTCGTTTTGACCCCAACCCTCTGTTAACACTCTCTTACTATATATTGTGTGTTGTTCACTCAAAACGTTTTGTTTAAGAGGAGGGAAAATTAAGAAGACTGATTTCTCTCTCTTTGTTGTTCTGCATAACACAACCAACGGTTTGGTGTTGATGGATGATGGATGAAACCAAGCTTAATTATAAAATATATTTTGAAAGCACAAACAAATGAATTAAATATTAGAAACTTTAAATTTTGATTTATAAAGTTTTCTTAGAAATACCAATGAAAAGTTCACTTAAAATTAATCGTACCGTTTAGAATATTAGAAAACGTGTCCATGATATATATTCCGTGTTCCGTTAATCAATTAAAAATAACTGCCCTAAATATGAAATTGTAGTGGTGATATTTTCAAACAAGAACACATCAAAAAATGATTGAAAAACCTGATCTGATGGATGATCGTCCGACAATTGCACCCTTATTAAAAAAAAAGAAAGAACGGCCATGGCAATATATATTATTCCCTCCGTTTCTAAATATATATTTGACGTCATTGACTTTTTTAAATATGTTTGACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTATTTTCATATCATTTGATTCATTGTTAAATATACTTTTATATATACATATAGTTTTACATATTTCACAAAAGTTTTTTGAATAAGACGAACGGTTAAACATGTGCTAAAAAGTCAATGGTGTTAAATATTTAGAAACGTAGGGAGTATCTGATTGAGGGGGTGTGAGTATGTGACACCTGATGAAAATGTGACAAAATAGACGCATACTTTCAGTTGTATAATCATCGTTTTGGAAATTGGAAGCAGACATGAAGAACCTAGACATAATATAGCTAGCTAGGTCCCAACTCCAAAAATTCCCATTCGTGTTAGGACAGATTCTGCACTCCGTGGTCCATGTATATTGTACTCAAGTACATACAATCCTGCAACAAATCATTCACACGTGACCGTATGACCCCACACCAACCTAACTTTTTTTATTTTTTTGAGAACACACACCAACCTATCGATTATCGAACAATACTGTGCTACGCAACAATGGCATCTCGAATATAATCAAACGTGACATTTGGTTTGGCTTTTTCTCGATGGAGTATATATATACAACATTAATTCGATAGTTTTTTTTAAAAAAAAACTTTTAAATGTAAGAATGTACTCCATCCATTTCAGGTTATAAAATATTTTGATGTTGGTCAAAGTTAAACTGCTTTAAGCTTGAATAAGTTTATAAACAAGTATAGTAATATTTACATTACCAAATTAGTTTTATTAAATTAATAATTAAATATATTTTTATAATATATTTTTATTGGTTAAAAAATATTACTATTTTTTCTATAAACTTTGTCAAACTTAAACTAGTTTGACTTTAATCAAAGTCAAAACATCTAATAACCTGAAACGGAAGGTTATATTGTAAGTGAACTTAGATTAAGCAATTAAGGTCCCCATCATTTGGCTTATTTCCTAATAAGCCAAAACGGCTTATTAGGAAATAAAAATAAATTTGTGGGTAAAACTTTTATAAATGTGTTATTTGTGACTTAAAAGCCAATGTTGAAAAAGAAACTATGTTGAAAATATGTCAAAATCAATCTTAAAATTAAGCTTAAAAATTTAAAATTTGGCTTTTTCTTTGGTTTATTAGGCTATCCGACGAGGCTGTAAGTGCAGAAAGTCGATTAGCACCACGAGCATATGTGCGTGAGGTCGTAGGTGCAATCCTCGCCTCACGCGAGCGCGCGGCAGCAATTTTATTTCATATTTGCATGAATCTTAACACTCCTTTGAGAGTTTACAAAGTGAAAGCTTTTTGATCAAGCTGTCAGACAATTTTGTAGCGATTTTCGTTCCTTAATTACATGAACGATTATAATAAGGCTATTCGGCCTTCGTACCTAAACTATGCTCACCAATATATATCCGCTAATGCCAAAATCTGTGTCGGCTGGCCAGTCTGCCTGTCTGTCCGAGAGATCAATGCATCTATACAGATCGGTGTCTGATTACTTAATTTGTTTGGCTAGCTTAATCTGCAACGTGTTGCATACCGCAACAAGCTAATCGATCAAAAGCTATATATACAGACAGATTGATGTACGACCACAAGTACGTACGTACTGGGGTCAAATCGAGGATGATATCTGTACGTCGACAGAGAGTATTGGACAGGTGTAGACAGTCACATGCGTTTGTTCTTGAGAAAGTTCTTCAGACCTGCGACTTGTTGATCGATCGATCGATAGCTCGGTGCCGCTGCTTGCATTTGGTGGCGCATCACTGTCTCGTCGCATTGTCGCACGATCGACCACAAATACCAGAACTACTTGTGGCACAACACGATTGTCTCCGGCCCTACGGCCGGCACCTACCTAGCTAGGTTAATTAGCTGATTAGCCAGTGGCTACTAGCCCTATCCTAAAATATAATAATTTTTAACATTTAAAATTTATCCTAAAACTTAATAACTTTTTCATGTTCATTTTCTTCTCAACCAATTATAATCTTATTTCATTTAAATTTTACAGTTATTTTTTGTGGTGGTTATAGAGGTTTTGAGGGTAGCCTTTGGATTACCCTATCCGTTAAATATTTTTTTTAAAAAAAGATGTAATTTCGATAAAATAGATGTAAATTTGATATTATGCAATTTCGAATTATGGGGGTAGGATCACCCAATGAAAACTTCTAGAGCCACTGCTACTTTCTTGTCCCTTGCTACTTTCTTGTCCCTAGCAATCACATTCTTTTCACATTTAATTCCACATATTTTCTTAATACTCGTATTCAACCCTAAAAATTATTATATTCTGGAATGAATGTACTCCTAGCTAGCAAGCATCTGTTTCAGTCACTTGGCAGAGTTAGTGGAGTTTCTGCTACTGAGTTAAACAATTGGGCTTTCCCTATGATCAAGTGATTAGTTTCTGTATCTTCATCCTAAAATATAAAAACAATTTAGGATTAAACATATTAAAAAAAAATAGGTGGAATTAAACAGAAGAAATGTTTTGATTGAATTAGAAGAAAAATTAGGTTAAGAGATTAAATGGGGAATGTTCTCAACAAGTGAATCGTTAAGAAGATAATATAGTTGGAAAAATTGTTAAATTTTAGGGTAAATTTGAAATGCTTACAAAAGTTGATATATTTTAAGACTGATGGAGCAATTGTTTAGGTTTGGGTTCACAGTTTCGGAAGTAAATTTGCAAAATTTGGACCGTGATAAGCCCGACGCGCCTCTACAAAAAATAATGTTTCTAAATTATTTAAATTTGACAAAAGTTTGTTCGAATTTACTAGTGTTAATCTGTTCAAATTTCAAAATTTATGTTCAAAAAAAAATGTAAGGTTAATTTAAATTGTTTGTTGCAGATTTCCAGCACCTGAACAGCTCCGGACTGCACCTGACGCTGCACCACCCGCAGAGCCCCTGCTCGCCGGCGCCACTCCCCTCCGACCTCCCCTTCTCCGCCGTCGTCACCCACGACGACGCCCGCATCGCCCACCTCGCCTCGCGCCTCGCCAACAACCACCCGACATCGCCGTCGTCATCGTCTCTCCTCCACGGCCACCGCAAGAAGAAGGCCGGCGGCGTCGGCGGCTCGCAGGCGTCGTCGTCATCCGTGCCGCTGACGCCGGGCGCGTCGGTGGCCGTCGGCAACTACGTGACCCGCCTGGGCCTCGGCACGCCGGCGACCTCCTACGTGATGGTGGTCGACACGGGGTCGTCGCTCACCTGGCTGCAGTGCTCCCCGTGCTCGGTGTCGTGCCACCGGCAGGCCGGTCCGGTGTTCGACCCGCGCGCGTCGGGCACGTACGCCGCCGTGCAGTGCTCCTCGTCGGAGTGCGGCGAGCTCCAGGCCGCCACGCTCAACCCCTCCGCCTGCTCCGTCTCCAACGTCTGCATCTACCAGGCCAGCTACGGCGACAGCTCCTACTCCGTCGGCTACCTCAGCAAGGACACCGTCTCCTTCGGCTCCGGCAGCTTCCCGGGCTTCTACTACGGCTGCGGCCAAGACAACGAGGGCCTCTTCGGCCGCTCCGCGGGGCTCATCGGCCTCGCCAAGAACAAGCTCTCGCTGCTCTACCAGCTAGCCCCGAGCCTCGGCTACGCCTTCTCCTACTGCCTCCCGACCTCGTCGGCGGCGGCGGGCTACCTCTCCATCGGCTCGTACAACCCCGGCCAGTACTCGTACACGCCCATGGCGTCCAGCTCCCTCGACGCCTCGCTCTACTTCGTCACCCTGTCGGGGATCTCGGTCGCCGGGGCGCCGCTCGCCGTGCCGCCGTCGGAGTACCGCAGCCTGCCGACGATCATCGACTCCGGCACGGTGATCACGCGGCTGCCGCCGAACGTGTACACGGCGCTGAGCAGGGCCGTGGCCGCGGCCATAGCCGGCGCCGCGCCGCGGGCGCCGACCTACTCCATCCTGGACACCTGCTTCCGGGGCTCCGCCGCGGGGCTGCGCGTCCCGCGCGTGGACATGGCGTTCGCCGGCGGCGCGACGCTGGCGCTGTCCCCCGGGAACGTGCTCATCGACGTCGACGACTCCACGACGTGCCTGGCGTTCGCGCCGACCGGCGGCACGGCGATCATCGGGAACACGCAGCAGCAGACGTTCAGCGTGGTGTACGACGTCGCGCAGTCCAGGATCGGCTTCGCCGCCGGCGGCTGCAGCTGAGGACCCAAACTGCAGCTGGCCGACTCAAGCTAGGTAAAAGAGCAATGCTGCTTCTTCTGCTGCTGCCGCCGCCTCCTATCTCTGCTCAGGCACAGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021377