BGIOSGA021413

From RiceWiki
Revision as of 13:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021413| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021413, complete gene.| tag = OsI_226...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021413

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021413, complete gene.

LocusTag

OsI_22614

Ensembl Transcript ID

BGIOSGA021413-TA

Ensembl Protein ID

BGIOSGA021413-PA

Length

2361

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11642099..11644459

Sequence Coding Region

11643339..11644459,11642978..11643236,11642099..11642242

Genome Context

<gbrowseImage1> name=IndicaChromosome06:11642099..11644459 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:11642099..11644459 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAACAAGTCTGCGCAAGACCCGCACCGGCCATTGGAGTACGACCTGCGGAAATACCTGCTGCTGCTGGCCACCATGGTGGCCACGGTGACATACACCGCCGGATTCAACCCACCGGGAGACGTCTGGCAGGAAACCGAGGCAAGGCACCTCGCCGGTGACTCCATCATCCGGGACACCCACTACCCCCGGTACATTATGTTCTTCTACTGCAACGCAGCCGCGTTCGCTCTGTCGATCGTCGTCATCGTCCTCATCTTCATCCTTGCCATCCTGCACGAGAAGAACGGTATATGGATCTCCATGTTCCCACTTCGCCTTGCCATGGTGCTGAACCTGGTTGGCCTCGGGGGGGCCTATGCTGCCGGCACGAGCCGGCACGCGCTAACGGCAGGGAATCTCTCTGCGTTAGCGGCGGTTTTCTTGTATATGGTGGCTCAAACTGTGATGACACAGTTTCTCTGGGACCGGAACGACAAGAACCACCTGGAAGCGATCGGCCAAGGCACAGGTAATAATCCTCCTAATCCAGAGCACTCGGTGGGAGACATATCACCCGTGGTTTCGCGGGAAGAAGGATCACAACAACCAGGTAAGGAGAAGGAGAAGGAGGAGGAGGAAAAGAATCAGCGCCGCAAGGTCCTGATGCTGCTCGCGACATTCGTGATGAGCGTCGCGTACGTGGCTGGGTTGAGCGCACCAGGCGGCTACTGGGAGCGCAGCCAGGAGGAGGGACGCCATCATGCAGACGCGGGTGACCCAGTCCTGTGGGTACACCACTCTGTCCACCTGAGGGCGTTCGTTGGCTACAACACCACATCGTTCGTTGCGTCCCTGCTTATCATCATGCTGCTCTTGGACCAGAAGCAGAAGATCATCTTCCTACCCCTGGACATGAAGAGGAAGGCTGTCCCTGGACAGGCCCACATGCTCTATGCTTACATCACCATTGCTCTTGTTGGCCTTGTGGGGGCCTATGTTGCCGGCAGCTGCCGACATAGTGATACTACAATCTATGCGCTCAGTCTGGTTGCTACCGTTCTTATCTGCATTGGCATCCTCAAGGTGGTCTTGGGCTGCATGCCTAAACTTTCACAAACACCAAAAGCAAGTAGCAGGTCTGGCGAGAATAATGAGAATAATGAAGACACTTTTCGAGATAAAACACCAACCAATGGTGGTTTACTGAGTAATATGAACAATGAAGACGATATTCTGGAGAAGGCTCAATCTCTTGTTGTACTACTTTCCACTCTCATTGCAACCGTCACTTATCAAGCAGGGCTGGTCCCTCTAGGTGGTGTATGGCAAGAGAATCAGGATGGACACAAGGCTGGCAAGCCAATACTCATGTCCACCCAAGCCAAACGCTATAAGTTGTTCCCTTCGACAATGTCTGTTGCGAAAGTTAAAAAGAATGATGGGGACAGAGCTAGGAGTTTACAACAGCATGTCAAGCACAAGTATTTGATGTTGCTAGGAGTTTTGGCTGCAAGTGTGTCACCTATCAGGCCGGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MENKSAQDPHRPLEYDLRKYLLLLATMVATVTYTAGFNPPGDVWQETEARHLAGDSIIRDTHYPRYIMFFYCNAAAFALSIVVIVLIFILAILHEKNGIWISMFPLRLAMVLNLVGLGGAYAAGTSRHALTAGNLSALAAVFLYMVAQTVMTQFLWDRNDKNHLEAIGQGTGNNPPNPEHSVGDISPVVSREEGSQQPGKEKEKEEEEKNQRRKVLMLLATFVMSVAYVAGLSAPGGYWERSQEEGRHHADAGDPVLWVHHSVHLRAFVGYNTTSFVASLLIIMLLLDQKQKIIFLPLDMKRKAVPGQAHMLYAYITIALVGLVGAYVAGSCRHSDTTIYALSLVATVLICIGILKVVLGCMPKLSQTPKASSRSGENNENNEDTFRDKTPTNGGLLSNMNNEDDILEKAQSLVVLLSTLIATVTYQAGLVPLGGVWQENQDGHKAGKPILMSTQAKRYKLFPSTMSVAKVKKNDGDRARSLQQHVKHKYLMLLGVLAASVSPIRPA</aaseq>

Gene Sequence

<dnaseqindica>1..1121#1224..1482#2218..2361#ATGGAGAACAAGTCTGCGCAAGACCCGCACCGGCCATTGGAGTACGACCTGCGGAAATACCTGCTGCTGCTGGCCACCATGGTGGCCACGGTGACATACACCGCCGGATTCAACCCACCGGGAGACGTCTGGCAGGAAACCGAGGCAAGGCACCTCGCCGGTGACTCCATCATCCGGGACACCCACTACCCCCGGTACATTATGTTCTTCTACTGCAACGCAGCCGCGTTCGCTCTGTCGATCGTCGTCATCGTCCTCATCTTCATCCTTGCCATCCTGCACGAGAAGAACGGTATATGGATCTCCATGTTCCCACTTCGCCTTGCCATGGTGCTGAACCTGGTTGGCCTCGGGGGGGCCTATGCTGCCGGCACGAGCCGGCACGCGCTAACGGCAGGGAATCTCTCTGCGTTAGCGGCGGTTTTCTTGTATATGGTGGCTCAAACTGTGATGACACAGTTTCTCTGGGACCGGAACGACAAGAACCACCTGGAAGCGATCGGCCAAGGCACAGGTAATAATCCTCCTAATCCAGAGCACTCGGTGGGAGACATATCACCCGTGGTTTCGCGGGAAGAAGGATCACAACAACCAGGTAAGGAGAAGGAGAAGGAGGAGGAGGAAAAGAATCAGCGCCGCAAGGTCCTGATGCTGCTCGCGACATTCGTGATGAGCGTCGCGTACGTGGCTGGGTTGAGCGCACCAGGCGGCTACTGGGAGCGCAGCCAGGAGGAGGGACGCCATCATGCAGACGCGGGTGACCCAGTCCTGTGGGTACACCACTCTGTCCACCTGAGGGCGTTCGTTGGCTACAACACCACATCGTTCGTTGCGTCCCTGCTTATCATCATGCTGCTCTTGGACCAGAAGCAGAAGATCATCTTCCTACCCCTGGACATGAAGAGGAAGGCTGTCCCTGGACAGGCCCACATGCTCTATGCTTACATCACCATTGCTCTTGTTGGCCTTGTGGGGGCCTATGTTGCCGGCAGCTGCCGACATAGTGATACTACAATCTATGCGCTCAGTCTGGTTGCTACCGTTCTTATCTGCATTGGCATCCTCAAGGTGGTCTTGGGCTGCATGCCTAAACTTTCACAAACACCAAAAGCAAGTAGCAGGTATTAATATAACACATAAATATACTTATATATTTTGTCCTAAGGTTAACACCAAGTTTATTTAATTTTGGTTTGAACTTTTTCATGGATATGAATTGTTAGGTCTGGCGAGAATAATGAGAATAATGAAGACACTTTTCGAGATAAAACACCAACCAATGGTGGTTTACTGAGTAATATGAACAATGAAGACGATATTCTGGAGAAGGCTCAATCTCTTGTTGTACTACTTTCCACTCTCATTGCAACCGTCACTTATCAAGCAGGGCTGGTCCCTCTAGGTGGTGTATGGCAAGAGAATCAGGATGGACACAAGGCTGGCAAGCCAATACTCATGTCCACCCAAGCCAAACGCTATAAGGTATTTTTCTACTGCAACTCTACAGCCTTTGTAGCGTCCTTGGTCATCATTATCTTGGTCCGGTATAAGCCTTTGCTCAAACGCCACATACTTGAGGTAGCCATCATACTAGATTTGTTCGGTCTCTGGGAGCCTATGCTGCCGGGAGCTGCCAGGATGTAAGCACATCCATTTATGTCATTACTTTGGCTGGCGCTGTCCTGATCTATGTGGTAATTCATATTGTGTTCATCACTCTCGAAGATGAGGATAAGAACAAGACAAGTGTGCACAGCACTGCTCAAACTGGTCCACCTGTGATAAATCCTCTTCCAAGTGATTTATATGTCCACAAGAGGCGCAAAAGATTGCTCCTTTTCTCTGTCTTAGGTGCAACCCTCACTTACCAAGCTGGGCTGACCCCACATGGTGGATTCCGGCTTAAGGACGATGAGTTATCACATCACGCAGGTGACCCGGTCCTCTTGTACAACTATCCACGCCGTTACAAGGCATTCTTTTATTGTAATTCATTAAGCTTCATGTCATCCATCGCCCTCATCATACTCCATGTTAACCCCAATCTATATAGGCCAGCGATTCGAAGCTATGCTCTCTCTGTTTGCGTAGCTACAGGCTTGCTTGCTCTCATGAGTGCCTATGCTGCTGGAAGCACACAACATCTCAAAACATCCATCTATGTCTTCGCATTGGCGGTTTTACTACTCTTAGTGATGATCTTATTCCTAAATTAAGTTGTTCCCTTCGACAATGTCTGTTGCGAAAGTTAAAAAGAATGATGGGGACAGAGCTAGGAGTTTACAACAGCATGTCAAGCACAAGTATTTGATGTTGCTAGGAGTTTTGGCTGCAAGTGTGTCACCTATCAGGCCGGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021413