BGIOSGA021478

From RiceWiki
Revision as of 13:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021478| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021478, complete gene.| tag = OsI_224...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021478

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021478, complete gene.

LocusTag

OsI_22480

Ensembl Transcript ID

BGIOSGA021478-TA

Ensembl Protein ID

BGIOSGA021478-PA

Length

1223

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9927146..9928368

Sequence Coding Region

9928330..9928368,9927787..9928234),complement(9927570..9927623,9927146..9927423

Genome Context

<gbrowseImage1> name=IndicaChromosome06:9927146..9928368 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:9927146..9928368 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTGGAGGGCGGCGGCGCGGCGGCGCGGAGGAAGGGGGGGTGGTGGTGGTGGCGGGAGGAGGCGGTGCTGGCGTACCAGAGCCTCGGGGTGGTGTACGGCGAGGTGGCGGCGGCGCCGCTGTACGTGTACAGGAGCGCGTTCGCCGGCGGCGACATCGAGCACTCGGCGGGGAACGAGGAGATCTACGGCGCCCTCTCGCTCGTGTTCTGGACGCTCACCCTCGTCCCGCTCGCCAAGTACGTCCTCCTCGTGCTCCGCGCCGACGACGCCGGCGAGGGCGGCACCTTCGCGCTCTACTCCCTCATCTGCCGCCGCGTCCGCGCCGGCCTCCTCCCCCCCTGCGCCTCCGCCGCTGCCGGCGAGGAGCTCGACGCTGCGGGCGCCGCGGCGGCGCCCGTGTCGGCCGTGCGCGCCGCGCTGGAGCGGGCACCGTGTCCTGCAGAGGCTGCTGCTGCTGCTCGCGCTGCTCGGGACGTGCATGTGTTCTCAGCGGTTTCCGGGCTGGAGTTGTCCATGGACGAGGACCAACACAAATATATATTGCTTCCAATAACATGCGTGATACTGGTGTGCTTATTCGCCTTGCAACACTACGGCACACACAGGGTTGGGTTTCTTTTCGCACCTATTGTTTGCTTATGGCTTCTCTGCATCAGCATCATAGGGGTGTACAACATCATCCATTGGAACCCCCATGTGTATCAAGCCCTTTCACCATACTACATGTATAAATTTCTCCGAAAGACTCAAACAGGAGGTTGGATGTCGCTTGGTGGAATCCTTTTATGCGTAACCGGTAAGGAAACAAATTAG</cdnaseq>

Protein Sequence

<aaseq>MDVEGGGAAARRKGGWWWWREEAVLAYQSLGVVYGEVAAAPLYVYRSAFAGGDIEHSAGNEEIYGALSLVFWTLTLVPLAKYVLLVLRADDAGEGGTFALYSLICRRVRAGLLPPCASAAAGEELDAAGAAAAPVSAVRAALERAPCPAEAAAAARAARDVHVFSAVSGLELSMDEDQHKYILLPITCVILVCLFALQHYGTHRVGFLFAPIVCLWLLCISIIGVYNIIHWNPHVYQALSPYYMYKFLRKTQTGGWMSLGGILLCVTGKETN</aaseq>

Gene Sequence

<dnaseqindica>1..39#135..582#746..799#946..1223#ATGGATGTGGAGGGCGGCGGCGCGGCGGCGCGGAGGAAGGTGAGGCGGCGGCGGGGCGCCATTTTTTTTCTTCTTCTCTTTTTGGTTGGGTTCTTGGTTTGATGTTTGATGGGTGTTTGATGGTGGATTGCAAGGGGGGGTGGTGGTGGTGGCGGGAGGAGGCGGTGCTGGCGTACCAGAGCCTCGGGGTGGTGTACGGCGAGGTGGCGGCGGCGCCGCTGTACGTGTACAGGAGCGCGTTCGCCGGCGGCGACATCGAGCACTCGGCGGGGAACGAGGAGATCTACGGCGCCCTCTCGCTCGTGTTCTGGACGCTCACCCTCGTCCCGCTCGCCAAGTACGTCCTCCTCGTGCTCCGCGCCGACGACGCCGGCGAGGGCGGCACCTTCGCGCTCTACTCCCTCATCTGCCGCCGCGTCCGCGCCGGCCTCCTCCCCCCCTGCGCCTCCGCCGCTGCCGGCGAGGAGCTCGACGCTGCGGGCGCCGCGGCGGCGCCCGTGTCGGCCGTGCGCGCCGCGCTGGAGCGGGCACCGTGTCCTGCAGAGGCTGCTGCTGCTGCTCGCGCTGCTCGGGACGTGCATGGTCATCGGCGACGGCGTGCTCACCCCTGCTGTCTCCGGTCGAGCACTTCCCCCTACTCGTCTGGGATTTCAATTTTTTCAATTTGAGTGAATTTTGGCTATGCAAATGGCAAATTGCGTTGATTTTGGTATAATCTGATGTTCTATGTTACTCTCTTTTGCAGTGTTCTCAGCGGTTTCCGGGCTGGAGTTGTCCATGGACGAGGACCAACACAAATGTAGGTTCAATTGCTTCTTCAACTTCCATTTCGATATCGTGCAATGGCGATTGTTGAGTCTGATTGAATTGAAACTAAAAACTTGTTCATTTTTTTTTTCTGAATACCTAGTTGATGATTAGTGTTTCTGATGCTGATTTTTGCAGATATATTGCTTCCAATAACATGCGTGATACTGGTGTGCTTATTCGCCTTGCAACACTACGGCACACACAGGGTTGGGTTTCTTTTCGCACCTATTGTTTGCTTATGGCTTCTCTGCATCAGCATCATAGGGGTGTACAACATCATCCATTGGAACCCCCATGTGTATCAAGCCCTTTCACCATACTACATGTATAAATTTCTCCGAAAGACTCAAACAGGAGGTTGGATGTCGCTTGGTGGAATCCTTTTATGCGTAACCGGTAAGGAAACAAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021478